RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 CEP85Q6P2H3 762 aa12.23□□□□□ -0.45
PMF1-204ENST00000466489 KLHDC4Q8TBB5 520 aa12.23□□□□□ -0.45
PMF1-204ENST00000466489 SSH3Q8TE77 659 aa12.23□□□□□ -0.45
PMF1-204ENST00000466489 PNMA6EA0A0J9YXQ4 647 aa12.22□□□□□ -0.45
PMF1-204ENST00000466489 RIMBP2O15034 1052 aa12.22□□□□□ -0.45
PMF1-204ENST00000466489 IFIT1P09914 478 aaKnown RBP12.22□□□□□ -0.45
PMF1-204ENST00000466489 UBE4AQ14139 1066 aa12.22□□□□□ -0.45
PMF1-204ENST00000466489 PUM3Q15397 648 aaKnown RBP12.22□□□□□ -0.45
PMF1-204ENST00000466489 NFKBIBQ15653 356 aa12.22□□□□□ -0.45
PMF1-204ENST00000466489 ZNF804AQ7Z570 1209 aa12.22□□□□□ -0.45
PMF1-204ENST00000466489 VPS37DQ86XT2 251 aa12.22□□□□□ -0.45
PMF1-204ENST00000466489 ERC1Q8IUD2 1116 aa12.22□□□□□ -0.45
PMF1-204ENST00000466489 POLLQ9UGP5 575 aa12.22□□□□□ -0.45
PMF1-204ENST00000466489 AKAP2Q9Y2D5 859 aa12.22□□□□□ -0.45
PMF1-204ENST00000466489 RIPOR2Q9Y4F9 1068 aa12.22□□□□□ -0.45
PMF1-204ENST00000466489 UTRNP46939 3433 aa12.21□□□□□ -0.45
PMF1-204ENST00000466489 TAF5LO75529 589 aa12.21□□□□□ -0.45
PMF1-204ENST00000466489 SURF6O75683 361 aaKnown RBP12.21□□□□□ -0.45
PMF1-204ENST00000466489 PDE8BO95263 885 aa12.21□□□□□ -0.45
PMF1-204ENST00000466489 SLC5A1P13866 664 aa12.21□□□□□ -0.45
PMF1-204ENST00000466489 RGS3P49796 1198 aa12.21□□□□□ -0.45
PMF1-204ENST00000466489 LRRC24Q50LG9 513 aa12.21□□□□□ -0.45
PMF1-204ENST00000466489 CAVIN4Q5BKX8 364 aa12.21□□□□□ -0.45
PMF1-204ENST00000466489 HELBQ8NG08 1087 aaPredicted RBP12.21□□□□□ -0.45
PMF1-204ENST00000466489 PUS3Q9BZE2 481 aaKnown RBP12.21□□□□□ -0.45
PMF1-204ENST00000466489 ZNRF3Q9ULT6 936 aa12.21□□□□□ -0.45
PMF1-204ENST00000466489 PA2G4Q9UQ80 394 aaKnown RBP12.21□□□□□ -0.45
PMF1-204ENST00000466489 MYH13Q9UKX3 1938 aa12.21□□□□□ -0.46
PMF1-204ENST00000466489 POLA2Q14181 598 aa12.2□□□□□ -0.46
PMF1-204ENST00000466489 TNIP1Q15025 636 aa12.2□□□□□ -0.46
PMF1-204ENST00000466489 GCC1Q96CN9 775 aa12.2□□□□□ -0.46
PMF1-204ENST00000466489 COA1Q9GZY4 146 aa12.2□□□□□ -0.46
PMF1-204ENST00000466489 PSME4Q14997 1843 aa12.19□□□□□ -0.46
PMF1-204ENST00000466489 ECE2O60344 883 aa12.19□□□□□ -0.46
PMF1-204ENST00000466489 ATP2B3Q16720 1220 aa12.19□□□□□ -0.46
PMF1-204ENST00000466489 C15orf52Q6ZUT6 534 aaKnown RBP12.19□□□□□ -0.46
PMF1-204ENST00000466489 PODNQ7Z5L7 613 aa12.19□□□□□ -0.46
PMF1-204ENST00000466489 LPIN2Q92539 896 aa12.19□□□□□ -0.46
PMF1-204ENST00000466489 DBNDD1Q9H9R9 158 aa12.19□□□□□ -0.46
PMF1-204ENST00000466489 GNL3LQ9NVN8 582 aaKnown RBP12.19□□□□□ -0.46
PMF1-204ENST00000466489 ARAP2Q8WZ64 1704 aa12.18□□□□□ -0.46
PMF1-204ENST00000466489 GLTPD2A6NH11 291 aa12.18□□□□□ -0.46
PMF1-204ENST00000466489 FZD9O00144 591 aa12.18□□□□□ -0.46
PMF1-204ENST00000466489 FRAT2O75474 233 aaPredicted RBP12.18□□□□□ -0.46
PMF1-204ENST00000466489 PRELPP51888 382 aa12.18□□□□□ -0.46
PMF1-204ENST00000466489 GORABQ5T7V8 394 aa12.18□□□□□ -0.46
PMF1-204ENST00000466489 CIAPIN1Q6FI81 312 aa12.18□□□□□ -0.46
PMF1-204ENST00000466489 ATG9AQ7Z3C6 839 aa12.18□□□□□ -0.46
PMF1-204ENST00000466489 SLC51AQ86UW1 340 aa12.18□□□□□ -0.46
PMF1-204ENST00000466489 GPC2Q8N158 579 aa12.18□□□□□ -0.46
PMF1-204ENST00000466489 TBC1D32Q96NH3 1257 aa12.18□□□□□ -0.46
PMF1-204ENST00000466489 CIZ1Q9ULV3 898 aaPredicted RBP12.18□□□□□ -0.46
PMF1-204ENST00000466489 SCN4AP35499 1836 aa12.17□□□□□ -0.46
PMF1-204ENST00000466489 IQCA1LA6NCM1 817 aa12.17□□□□□ -0.46
PMF1-204ENST00000466489 RAB11FIP3O75154 756 aa12.17□□□□□ -0.46
PMF1-204ENST00000466489 LMOD1P29536 600 aaPredicted RBP12.17□□□□□ -0.46
PMF1-204ENST00000466489 HIBADHP31937 336 aaKnown RBP12.17□□□□□ -0.46
PMF1-204ENST00000466489 DOK7Q18PE1 504 aa12.17□□□□□ -0.46
PMF1-204ENST00000466489 SKOR2Q2VWA4 1001 aaPredicted RBP12.17□□□□□ -0.46
PMF1-204ENST00000466489 VGLL2Q8N8G2 317 aa12.17□□□□□ -0.46
PMF1-204ENST00000466489 GPR101Q96P66 508 aaPredicted RBP12.17□□□□□ -0.46
PMF1-204ENST00000466489 GPBP1L1Q9HC44 474 aaPredicted RBP12.17□□□□□ -0.46
PMF1-204ENST00000466489 GJA3Q9Y6H8 435 aa12.17□□□□□ -0.46
PMF1-204ENST00000466489 TFCP2Q12800 502 aa12.16□□□□□ -0.46
PMF1-204ENST00000466489 SMC5Q8IY18 1101 aa12.16□□□□□ -0.46
PMF1-204ENST00000466489 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
PMF1-204ENST00000466489 KIF1BPQ96EK5 621 aa12.16□□□□□ -0.46
PMF1-204ENST00000466489 NEUROD6Q96NK8 337 aa12.16□□□□□ -0.46
PMF1-204ENST00000466489 EXOC6BQ9Y2D4 811 aa12.16□□□□□ -0.46
PMF1-204ENST00000466489 MYO3BQ8WXR4 1341 aa12.15□□□□□ -0.46
PMF1-204ENST00000466489 WDR90Q96KV7 1748 aa12.15□□□□□ -0.46
PMF1-204ENST00000466489 USP17L3A6NCW0 530 aa12.15□□□□□ -0.46
PMF1-204ENST00000466489 USP17L4A6NCW7 530 aa12.15□□□□□ -0.46
PMF1-204ENST00000466489 DDX11L8A8MPP1 907 aa12.15□□□□□ -0.46
PMF1-204ENST00000466489 RAD17O75943 681 aa12.15□□□□□ -0.46
PMF1-204ENST00000466489 IGHDP01880 384 aa12.15□□□□□ -0.46
PMF1-204ENST00000466489 USP17L1Q7RTZ2 530 aa12.15□□□□□ -0.46
PMF1-204ENST00000466489 C16orf71Q8IYS4 520 aaPredicted RBP12.15□□□□□ -0.46
PMF1-204ENST00000466489 CLASRPQ8N2M8 674 aaKnown RBP12.15□□□□□ -0.46
PMF1-204ENST00000466489 ZNF526Q8TF50 670 aaPredicted RBP12.15□□□□□ -0.46
PMF1-204ENST00000466489 GPR108Q9NPR9 543 aa12.15□□□□□ -0.46
PMF1-204ENST00000466489 CHMP5Q9NZZ3 219 aa12.15□□□□□ -0.46
PMF1-204ENST00000466489 SCN9AQ15858 1988 aa12.15□□□□□ -0.46
PMF1-204ENST00000466489 COL4A5P29400 1685 aa12.15□□□□□ -0.46
PMF1-204ENST00000466489 ZNF541Q9H0D2 1346 aa12.14□□□□□ -0.47
PMF1-204ENST00000466489 ZNF609O15014 1411 aa12.14□□□□□ -0.47
PMF1-204ENST00000466489 A0A1B0GUL7 405 aa12.14□□□□□ -0.47
PMF1-204ENST00000466489 FGFR2P21802 821 aa12.14□□□□□ -0.47
PMF1-204ENST00000466489 RPS12P25398 132 aaKnown RBP12.14□□□□□ -0.47
PMF1-204ENST00000466489 GYG1P46976 350 aa12.14□□□□□ -0.47
PMF1-204ENST00000466489 CXCL9Q07325 125 aa12.14□□□□□ -0.47
PMF1-204ENST00000466489 STRIP1Q5VSL9 837 aa12.14□□□□□ -0.47
PMF1-204ENST00000466489 CD209Q9NNX6 404 aa12.14□□□□□ -0.47
PMF1-204ENST00000466489 YDJCA8MPS7 323 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 SNAP23O00161 211 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 APBB1O00213 710 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 SEMA3EO15041 775 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 DDNO94850 711 aaPredicted RBP12.13□□□□□ -0.47
PMF1-204ENST00000466489 SASH1O94885 1247 aa12.13□□□□□ -0.47
PMF1-204ENST00000466489 IL1R1P14778 569 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms