RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 RTL9Q8NET4 1388 aa8.09□□□□□ -1.12
CDHR3-204ENST00000466351 ECM29Q5VYK3 1845 aa8.08□□□□□ -1.12
CDHR3-204ENST00000466351 MAP3K15Q6ZN16 1313 aa8.08□□□□□ -1.12
CDHR3-204ENST00000466351 VPS37CA5D8V6 355 aaPredicted RBP8.08□□□□□ -1.12
CDHR3-204ENST00000466351 ERVV-1B6SEH8 477 aa8.08□□□□□ -1.12
CDHR3-204ENST00000466351 RNF113AO15541 343 aaKnown RBP8.08□□□□□ -1.12
CDHR3-204ENST00000466351 FIBPO43427 364 aa8.08□□□□□ -1.12
CDHR3-204ENST00000466351 GADD45BO75293 160 aaPredicted RBP8.08□□□□□ -1.12
CDHR3-204ENST00000466351 STARD3NLO95772 234 aa8.08□□□□□ -1.12
CDHR3-204ENST00000466351 DNM1Q05193 864 aaKnown RBP8.08□□□□□ -1.12
CDHR3-204ENST00000466351 KIAA2012Q0VF49 1180 aa8.08□□□□□ -1.12
CDHR3-204ENST00000466351 RESTQ13127 1097 aa8.08□□□□□ -1.12
CDHR3-204ENST00000466351 CCDC57Q2TAC2 916 aa8.08□□□□□ -1.12
CDHR3-204ENST00000466351 CCDC158Q5M9N0 1113 aa8.08□□□□□ -1.12
CDHR3-204ENST00000466351 GIGYF2Q6Y7W6 1299 aaKnown RBP8.08□□□□□ -1.12
CDHR3-204ENST00000466351 KIF6Q6ZMV9 814 aa8.08□□□□□ -1.12
CDHR3-204ENST00000466351 CDC37L1Q7L3B6 337 aa8.08□□□□□ -1.12
CDHR3-204ENST00000466351 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDHR3-204ENST00000466351 NUP62CLQ9H1M0 184 aa8.08□□□□□ -1.12
CDHR3-204ENST00000466351 TMOD3Q9NYL9 352 aa8.08□□□□□ -1.12
CDHR3-204ENST00000466351 SLAIN2Q9P270 581 aa8.08□□□□□ -1.12
CDHR3-204ENST00000466351 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.08□□□□□ -1.12
CDHR3-204ENST00000466351 NID2Q14112 1375 aa8.08□□□□□ -1.12
CDHR3-204ENST00000466351 CASZ1Q86V15 1759 aa8.07□□□□□ -1.12
CDHR3-204ENST00000466351 MAST3O60307 1309 aa8.07□□□□□ -1.12
CDHR3-204ENST00000466351 A0A1B0GUL7 405 aa8.07□□□□□ -1.12
CDHR3-204ENST00000466351 GOLGA6L4A6NEF3 574 aa8.07□□□□□ -1.12
CDHR3-204ENST00000466351 IGSF3O75054 1194 aa8.07□□□□□ -1.12
CDHR3-204ENST00000466351 KDM4AO75164 1064 aa8.07□□□□□ -1.12
CDHR3-204ENST00000466351 IFIT1P09914 478 aaKnown RBP8.07□□□□□ -1.12
CDHR3-204ENST00000466351 CHRNA2Q15822 529 aa8.07□□□□□ -1.12
CDHR3-204ENST00000466351 TTC6Q86TZ1 520 aa8.07□□□□□ -1.12
CDHR3-204ENST00000466351 LEO1Q8WVC0 666 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-204ENST00000466351 PIBF1Q8WXW3 757 aa8.07□□□□□ -1.12
CDHR3-204ENST00000466351 APPBP2Q92624 585 aa8.07□□□□□ -1.12
CDHR3-204ENST00000466351 SPATA32Q96LK8 384 aa8.07□□□□□ -1.12
CDHR3-204ENST00000466351 PRIMPOLQ96LW4 560 aa8.07□□□□□ -1.12
CDHR3-204ENST00000466351 ZNF396Q96N95 335 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-204ENST00000466351 BCL11BQ9C0K0 894 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-204ENST00000466351 CLSTN2Q9H4D0 955 aa8.07□□□□□ -1.12
CDHR3-204ENST00000466351 SPTLC3Q9NUV7 552 aa8.07□□□□□ -1.12
CDHR3-204ENST00000466351 ROBO1Q9Y6N7 1651 aa8.07□□□□□ -1.12
CDHR3-204ENST00000466351 MYO5AQ9Y4I1 1855 aaKnown RBP8.06□□□□□ -1.12
CDHR3-204ENST00000466351 SCN7AQ01118 1682 aa8.06□□□□□ -1.12
CDHR3-204ENST00000466351 HSPD1P10809 573 aaKnown RBP8.06□□□□□ -1.12
CDHR3-204ENST00000466351 CDC25BP30305 580 aa8.06□□□□□ -1.12
CDHR3-204ENST00000466351 RCAN1P53805 252 aa8.06□□□□□ -1.12
CDHR3-204ENST00000466351 IMMTQ16891 758 aaKnown RBP8.06□□□□□ -1.12
CDHR3-204ENST00000466351 BRAPQ7Z569 592 aa8.06□□□□□ -1.12
CDHR3-204ENST00000466351 NSUN7Q8NE18 718 aaKnown RBP8.06□□□□□ -1.12
CDHR3-204ENST00000466351 KLHDC4Q8TBB5 520 aa8.06□□□□□ -1.12
CDHR3-204ENST00000466351 NAP1L5Q96NT1 182 aaPredicted RBP8.06□□□□□ -1.12
CDHR3-204ENST00000466351 DNAJC2Q99543 621 aaKnown RBP8.06□□□□□ -1.12
CDHR3-204ENST00000466351 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.06□□□□□ -1.12
CDHR3-204ENST00000466351 RCOR1Q9UKL0 485 aa8.06□□□□□ -1.12
CDHR3-204ENST00000466351 MAST2Q6P0Q8 1798 aa8.06□□□□□ -1.12
CDHR3-204ENST00000466351 MYH6P13533 1939 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 MYH13Q9UKX3 1938 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 DLEC1Q9Y238 1755 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 A0A1W2PQ27 194 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 A0A1W2PQ64 194 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 A0A1W2PQD8 194 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 SPDYE4A6NLX3 237 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 ATP5J2-PTCD1G3V325 749 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 H3BQV1 296 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 DYNC1I1O14576 645 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 PTCD1O75127 700 aaKnown RBP8.05□□□□□ -1.12
CDHR3-204ENST00000466351 YEATS4O95619 227 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 PTMAP06454 111 aaKnown RBP8.05□□□□□ -1.12
CDHR3-204ENST00000466351 UQCRFS1P1P0C7P4 283 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 CPA1P15085 419 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 ARID4AP29374 1257 aaPredicted RBP8.05□□□□□ -1.12
CDHR3-204ENST00000466351 IL6STP40189 918 aaPredicted RBP8.05□□□□□ -1.12
CDHR3-204ENST00000466351 NT5C2P49902 561 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 IFIT5Q13325 482 aaKnown RBP8.05□□□□□ -1.12
CDHR3-204ENST00000466351 UBE3CQ15386 1083 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 ALX1Q15699 326 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 IFFO2Q5TF58 517 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 FOXD4L5Q5VV16 416 aaPredicted RBP8.05□□□□□ -1.12
CDHR3-204ENST00000466351 SARM1Q6SZW1 724 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 TTLL7Q6ZT98 887 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 Q6ZUG5 572 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 SPDYE1Q8NFV5 336 aaPredicted RBP8.05□□□□□ -1.12
CDHR3-204ENST00000466351 TDRD7Q8NHU6 1098 aaKnown RBP8.05□□□□□ -1.12
CDHR3-204ENST00000466351 CABLES1Q8TDN4 633 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 FOXD4L4Q8WXT5 416 aaPredicted RBP8.05□□□□□ -1.12
CDHR3-204ENST00000466351 BRF1Q92994 677 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 NOL10Q9BSC4 688 aaKnown RBP8.05□□□□□ -1.12
CDHR3-204ENST00000466351 TNMDQ9H2S6 317 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 GDPD2Q9HCC8 539 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 CLEC11AQ9Y240 323 aa8.05□□□□□ -1.12
CDHR3-204ENST00000466351 MROH5Q6ZUA9 1318 aa8.04□□□□□ -1.12
CDHR3-204ENST00000466351 KAT6BQ8WYB5 2073 aa8.04□□□□□ -1.12
CDHR3-204ENST00000466351 COL24A1Q17RW2 1714 aa8.04□□□□□ -1.12
CDHR3-204ENST00000466351 E7EWF7 191 aa8.04□□□□□ -1.12
CDHR3-204ENST00000466351 GOLIM4O00461 696 aa8.04□□□□□ -1.12
CDHR3-204ENST00000466351 NEMFO60524 1076 aa8.04□□□□□ -1.12
CDHR3-204ENST00000466351 CDKL5O76039 1030 aa8.04□□□□□ -1.12
CDHR3-204ENST00000466351 ADCY5O95622 1261 aa8.04□□□□□ -1.12
CDHR3-204ENST00000466351 HCLS1P14317 486 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms