RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 GPR101Q96P66 508 aaPredicted RBP22.53■■□□□ 1.2
CAPN3-209ENST00000466222 IL25Q9H293 177 aa22.53■■□□□ 1.2
CAPN3-209ENST00000466222 ANKIB1Q9P2G1 1089 aa22.53■■□□□ 1.2
CAPN3-209ENST00000466222 CHMLP26374 656 aa22.53■■□□□ 1.2
CAPN3-209ENST00000466222 GYG1P46976 350 aa22.53■■□□□ 1.2
CAPN3-209ENST00000466222 FKBP4Q02790 459 aaKnown RBP eCLIP22.53■■□□□ 1.2
CAPN3-209ENST00000466222 CHMP5Q9NZZ3 219 aa22.53■■□□□ 1.2
CAPN3-209ENST00000466222 NRXN2Q9P2S2 1712 aa22.52■■□□□ 1.2
CAPN3-209ENST00000466222 GOLIM4O00461 696 aa22.52■■□□□ 1.2
CAPN3-209ENST00000466222 BBOX1O75936 387 aa22.52■■□□□ 1.2
CAPN3-209ENST00000466222 MCAMP43121 646 aa22.52■■□□□ 1.2
CAPN3-209ENST00000466222 GPSM2P81274 684 aa22.52■■□□□ 1.2
CAPN3-209ENST00000466222 TXNRD3Q86VQ6 643 aa22.52■■□□□ 1.2
CAPN3-209ENST00000466222 HSCBQ8IWL3 235 aa22.52■■□□□ 1.2
CAPN3-209ENST00000466222 SNX21Q969T3 373 aa22.52■■□□□ 1.2
CAPN3-209ENST00000466222 MASTLQ96GX5 879 aa22.52■■□□□ 1.2
CAPN3-209ENST00000466222 IQSEC3Q9UPP2 1182 aaPredicted RBP22.52■■□□□ 1.2
CAPN3-209ENST00000466222 H0YIN7 160 aa22.51■■□□□ 1.19
CAPN3-209ENST00000466222 EVI5LQ96CN4 794 aa22.51■■□□□ 1.19
CAPN3-209ENST00000466222 MTFR1LQ9H019 292 aa22.51■■□□□ 1.19
CAPN3-209ENST00000466222 NSFL1CQ9UNZ2 370 aaKnown RBP22.51■■□□□ 1.19
CAPN3-209ENST00000466222 PPEF1O14829 653 aaPredicted RBP22.51■■□□□ 1.19
CAPN3-209ENST00000466222 ZAP70P43403 619 aa22.51■■□□□ 1.19
CAPN3-209ENST00000466222 KCNJ4P48050 445 aa22.51■■□□□ 1.19
CAPN3-209ENST00000466222 UBE4AQ14139 1066 aa22.51■■□□□ 1.19
CAPN3-209ENST00000466222 ANKRD2Q9GZV1 360 aa22.51■■□□□ 1.19
CAPN3-209ENST00000466222 SLFNL1Q499Z3 407 aa22.5■■□□□ 1.19
CAPN3-209ENST00000466222 ZNF804BA4D1E1 1349 aa22.5■■□□□ 1.19
CAPN3-209ENST00000466222 PAG1Q9NWQ8 432 aa22.49■■□□□ 1.19
CAPN3-209ENST00000466222 ZNF219Q9P2Y4 722 aaPredicted RBP22.49■■□□□ 1.19
CAPN3-209ENST00000466222 FAM84BQ96KN1 310 aaPredicted RBP22.49■■□□□ 1.19
CAPN3-209ENST00000466222 FSD1Q9BTV5 496 aa22.49■■□□□ 1.19
CAPN3-209ENST00000466222 QSER1Q2KHR3 1735 aa22.49■■□□□ 1.19
CAPN3-209ENST00000466222 A0A0G2JLW4 131 aa22.48■■□□□ 1.19
CAPN3-209ENST00000466222 RASGRF1Q13972 1273 aa22.48■■□□□ 1.19
CAPN3-209ENST00000466222 ANKRD31Q8N7Z5 1873 aa22.47■■□□□ 1.19
CAPN3-209ENST00000466222 ALDH1B1P30837 517 aa22.47■■□□□ 1.19
CAPN3-209ENST00000466222 CWC27Q6UX04 472 aaKnown RBP22.47■■□□□ 1.19
CAPN3-209ENST00000466222 HMG20BQ9P0W2 317 aa22.47■■□□□ 1.19
CAPN3-209ENST00000466222 WWC3Q9ULE0 1092 aa22.47■■□□□ 1.19
CAPN3-209ENST00000466222 ARID4AP29374 1257 aaPredicted RBP22.47■■□□□ 1.19
CAPN3-209ENST00000466222 IL27Q8NEV9 243 aa22.47■■□□□ 1.19
CAPN3-209ENST00000466222 FAM227BQ96M60 508 aa22.47■■□□□ 1.19
CAPN3-209ENST00000466222 POLLQ9UGP5 575 aa22.47■■□□□ 1.19
CAPN3-209ENST00000466222 ATP6V0A2Q9Y487 856 aa22.47■■□□□ 1.19
CAPN3-209ENST00000466222 XDHP47989 1333 aa22.47■■□□□ 1.19
CAPN3-209ENST00000466222 SPEF2Q9C093 1822 aa22.47■■□□□ 1.19
CAPN3-209ENST00000466222 CASZ1Q86V15 1759 aa22.46■■□□□ 1.19
CAPN3-209ENST00000466222 C10orf71Q711Q0 1435 aa22.46■■□□□ 1.19
CAPN3-209ENST00000466222 CYP2E1P05181 493 aaPredicted RBP22.46■■□□□ 1.19
CAPN3-209ENST00000466222 PRPF40BQ6NWY9 871 aaKnown RBP22.46■■□□□ 1.19
CAPN3-209ENST00000466222 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.46■■□□□ 1.19
CAPN3-209ENST00000466222 PPP1R1BQ9UD71 204 aaPredicted RBP22.46■■□□□ 1.19
CAPN3-209ENST00000466222 IRS2Q9Y4H2 1338 aa22.45■■□□□ 1.19
CAPN3-209ENST00000466222 CASC1Q6TDU7 716 aa22.45■■□□□ 1.18
CAPN3-209ENST00000466222 SP8Q8IXZ3 490 aa22.45■■□□□ 1.18
CAPN3-209ENST00000466222 ZNF512BQ96KM6 892 aaPredicted RBP22.45■■□□□ 1.18
CAPN3-209ENST00000466222 ESYT1Q9BSJ8 1104 aa22.45■■□□□ 1.18
CAPN3-209ENST00000466222 UFL1O94874 794 aa22.45■■□□□ 1.18
CAPN3-209ENST00000466222 STYK1Q6J9G0 422 aa22.45■■□□□ 1.18
CAPN3-209ENST00000466222 KBTBD3Q8NAB2 608 aa22.45■■□□□ 1.18
CAPN3-209ENST00000466222 SGIP1Q9BQI5 828 aa22.45■■□□□ 1.18
CAPN3-209ENST00000466222 DPEP1P16444 411 aa22.44■■□□□ 1.18
CAPN3-209ENST00000466222 KCNA3P22001 575 aa22.44■■□□□ 1.18
CAPN3-209ENST00000466222 POLD1P28340 1107 aa22.44■■□□□ 1.18
CAPN3-209ENST00000466222 L1TD1Q5T7N2 865 aaKnown RBP22.44■■□□□ 1.18
CAPN3-209ENST00000466222 SPATA5Q8NB90 893 aa22.44■■□□□ 1.18
CAPN3-209ENST00000466222 PTGER2P43116 358 aa22.43■■□□□ 1.18
CAPN3-209ENST00000466222 CAVIN4Q5BKX8 364 aa22.43■■□□□ 1.18
CAPN3-209ENST00000466222 FBXO33Q7Z6M2 555 aa22.43■■□□□ 1.18
CAPN3-209ENST00000466222 VPS37DQ86XT2 251 aa22.43■■□□□ 1.18
CAPN3-209ENST00000466222 TBC1D16Q8TBP0 767 aa22.43■■□□□ 1.18
CAPN3-209ENST00000466222 DIAPH3Q9NSV4 1193 aa22.43■■□□□ 1.18
CAPN3-209ENST00000466222 LEMD3Q9Y2U8 911 aa22.43■■□□□ 1.18
CAPN3-209ENST00000466222 UQCRFS1P1P0C7P4 283 aa22.43■■□□□ 1.18
CAPN3-209ENST00000466222 MCM4P33991 863 aa22.43■■□□□ 1.18
CAPN3-209ENST00000466222 NMIQ13287 307 aaPredicted RBP22.43■■□□□ 1.18
CAPN3-209ENST00000466222 SEC62Q99442 399 aaKnown RBP22.43■■□□□ 1.18
CAPN3-209ENST00000466222 PIH1D3Q9NQM4 214 aaKnown RBP22.43■■□□□ 1.18
CAPN3-209ENST00000466222 GGA1Q9UJY5 639 aa22.43■■□□□ 1.18
CAPN3-209ENST00000466222 CIZ1Q9ULV3 898 aaPredicted RBP22.43■■□□□ 1.18
CAPN3-209ENST00000466222 A0A0D9SFI3 127 aa22.42■■□□□ 1.18
CAPN3-209ENST00000466222 PODXL2Q9NZ53 605 aa22.42■■□□□ 1.18
CAPN3-209ENST00000466222 JAG2Q9Y219 1238 aa22.42■■□□□ 1.18
CAPN3-209ENST00000466222 C6orf229H3BNL8 230 aa22.41■■□□□ 1.18
CAPN3-209ENST00000466222 HIBADHP31937 336 aaKnown RBP22.41■■□□□ 1.18
CAPN3-209ENST00000466222 KLHL34Q8N239 644 aa22.41■■□□□ 1.18
CAPN3-209ENST00000466222 COL11A2P13942 1736 aaPredicted RBP22.41■■□□□ 1.18
CAPN3-209ENST00000466222 BRPF3Q9ULD4 1205 aa22.41■■□□□ 1.18
CAPN3-209ENST00000466222 SGSM2O43147 1006 aa22.4■■□□□ 1.18
CAPN3-209ENST00000466222 TMC4Q7Z404 712 aa22.4■■□□□ 1.18
CAPN3-209ENST00000466222 C7orf43Q8WVR3 580 aa22.4■■□□□ 1.18
CAPN3-209ENST00000466222 ATP2B4P23634 1241 aa22.39■■□□□ 1.18
CAPN3-209ENST00000466222 MPNDQ8N594 471 aa22.39■■□□□ 1.18
CAPN3-209ENST00000466222 CNKSR1Q969H4 720 aa22.39■■□□□ 1.18
CAPN3-209ENST00000466222 RIMBP2O15034 1052 aa22.39■■□□□ 1.17
CAPN3-209ENST00000466222 C21orf2O43822 256 aa22.39■■□□□ 1.17
CAPN3-209ENST00000466222 DDIT3P35638 169 aa22.39■■□□□ 1.17
CAPN3-209ENST00000466222 ANO2Q9NQ90 1003 aa22.39■■□□□ 1.17
CAPN3-209ENST00000466222 COL1A1P02452 1464 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms