RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 ZNF609O15014 1411 aa13.32□□□□□ -0.28
GPNMB-206ENST00000465673 WNT10BO00744 389 aa13.32□□□□□ -0.28
GPNMB-206ENST00000465673 SASH1O94885 1247 aa13.32□□□□□ -0.28
GPNMB-206ENST00000465673 HSP90B1P14625 803 aaKnown RBP13.32□□□□□ -0.28
GPNMB-206ENST00000465673 KLRK1P26718 216 aa13.32□□□□□ -0.28
GPNMB-206ENST00000465673 FKBP1BP68106 108 aa13.32□□□□□ -0.28
GPNMB-206ENST00000465673 TTLL11Q8NHH1 800 aa13.32□□□□□ -0.28
GPNMB-206ENST00000465673 IFT57Q9NWB7 429 aa13.32□□□□□ -0.28
GPNMB-206ENST00000465673 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.32□□□□□ -0.28
GPNMB-206ENST00000465673 FZD1Q9UP38 647 aa13.32□□□□□ -0.28
GPNMB-206ENST00000465673 PITPNM2Q9BZ72 1349 aa13.32□□□□□ -0.28
GPNMB-206ENST00000465673 PAPPA2Q9BXP8 1791 aa13.32□□□□□ -0.28
GPNMB-206ENST00000465673 PI4KAP2A4QPH2 592 aa13.31□□□□□ -0.28
GPNMB-206ENST00000465673 GNAI1P63096 354 aa13.31□□□□□ -0.28
GPNMB-206ENST00000465673 PTPN12Q05209 780 aaKnown RBP13.31□□□□□ -0.28
GPNMB-206ENST00000465673 CWF19L2Q2TBE0 894 aaKnown RBP13.31□□□□□ -0.28
GPNMB-206ENST00000465673 PI4KAP1Q8N8J0 262 aa13.31□□□□□ -0.28
GPNMB-206ENST00000465673 HDAC9Q9UKV0 1011 aa13.31□□□□□ -0.28
GPNMB-206ENST00000465673 PSME4Q14997 1843 aa13.31□□□□□ -0.28
GPNMB-206ENST00000465673 CCT4P50991 539 aaKnown RBP13.3□□□□□ -0.28
GPNMB-206ENST00000465673 G2E3Q7L622 706 aa13.3□□□□□ -0.28
GPNMB-206ENST00000465673 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
GPNMB-206ENST00000465673 CDC5LQ99459 802 aaKnown RBP13.3□□□□□ -0.28
GPNMB-206ENST00000465673 BSDC1Q9NW68 430 aaPredicted RBP13.3□□□□□ -0.28
GPNMB-206ENST00000465673 MED23Q9ULK4 1368 aa13.3□□□□□ -0.28
GPNMB-206ENST00000465673 GPR25O00155 361 aa13.29□□□□□ -0.28
GPNMB-206ENST00000465673 DDX58O95786 925 aaKnown RBP13.29□□□□□ -0.28
GPNMB-206ENST00000465673 TM4SF4P48230 202 aa13.29□□□□□ -0.28
GPNMB-206ENST00000465673 CCDC30Q5VVM6 783 aa13.29□□□□□ -0.28
GPNMB-206ENST00000465673 KSR2Q6VAB6 950 aa13.29□□□□□ -0.28
GPNMB-206ENST00000465673 KIAA0825Q8IV33 1275 aa13.29□□□□□ -0.28
GPNMB-206ENST00000465673 TSR2Q969E8 191 aaKnown RBP13.29□□□□□ -0.28
GPNMB-206ENST00000465673 SPEF2Q9C093 1822 aa13.29□□□□□ -0.28
GPNMB-206ENST00000465673 ZNF646O15015 1829 aaPredicted RBP13.28□□□□□ -0.28
GPNMB-206ENST00000465673 SNAP23O00161 211 aa13.28□□□□□ -0.28
GPNMB-206ENST00000465673 STRIP1Q5VSL9 837 aa13.28□□□□□ -0.28
GPNMB-206ENST00000465673 UBE3BQ7Z3V4 1068 aa13.28□□□□□ -0.28
GPNMB-206ENST00000465673 OGFOD1Q8N543 542 aa13.28□□□□□ -0.28
GPNMB-206ENST00000465673 PCDHAC2Q9Y5I4 1007 aa13.28□□□□□ -0.28
GPNMB-206ENST00000465673 NEURL1BA8MQ27 555 aa13.27□□□□□ -0.29
GPNMB-206ENST00000465673 GTF2IP78347 998 aa13.27□□□□□ -0.29
GPNMB-206ENST00000465673 PRPF38BQ5VTL8 546 aaKnown RBP13.27□□□□□ -0.29
GPNMB-206ENST00000465673 TTLL5Q6EMB2 1281 aa13.27□□□□□ -0.29
GPNMB-206ENST00000465673 COA1Q9GZY4 146 aa13.27□□□□□ -0.29
GPNMB-206ENST00000465673 ZNF804BA4D1E1 1349 aa13.26□□□□□ -0.29
GPNMB-206ENST00000465673 H7C1W4 665 aa13.26□□□□□ -0.29
GPNMB-206ENST00000465673 NF2P35240 595 aa13.26□□□□□ -0.29
GPNMB-206ENST00000465673 PKN2Q16513 984 aaKnown RBP13.26□□□□□ -0.29
GPNMB-206ENST00000465673 PRKRIP1Q9H875 184 aaPredicted RBP13.26□□□□□ -0.29
GPNMB-206ENST00000465673 ANGEL1Q9UNK9 670 aaKnown RBP13.26□□□□□ -0.29
GPNMB-206ENST00000465673 AOX1Q06278 1338 aa13.25□□□□□ -0.29
GPNMB-206ENST00000465673 ITGA6P23229 1130 aa13.25□□□□□ -0.29
GPNMB-206ENST00000465673 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
GPNMB-206ENST00000465673 CALD1Q05682 793 aaKnown RBP13.25□□□□□ -0.29
GPNMB-206ENST00000465673 LDLRAD1Q5T700 205 aa13.25□□□□□ -0.29
GPNMB-206ENST00000465673 SPRYD7Q5W111 196 aa13.25□□□□□ -0.29
GPNMB-206ENST00000465673 ARMC9Q7Z3E5 817 aa13.25□□□□□ -0.29
GPNMB-206ENST00000465673 CERS5Q8N5B7 392 aa13.25□□□□□ -0.29
GPNMB-206ENST00000465673 ZBED3Q96IU2 234 aaPredicted RBP13.25□□□□□ -0.29
GPNMB-206ENST00000465673 CLMNQ96JQ2 1002 aa13.25□□□□□ -0.29
GPNMB-206ENST00000465673 LEMD3Q9Y2U8 911 aa13.25□□□□□ -0.29
GPNMB-206ENST00000465673 MYO3BQ8WXR4 1341 aa13.24□□□□□ -0.29
GPNMB-206ENST00000465673 FKTNO75072 461 aa13.24□□□□□ -0.29
GPNMB-206ENST00000465673 TAF5LO75529 589 aa13.24□□□□□ -0.29
GPNMB-206ENST00000465673 CASP7P55210 303 aa13.24□□□□□ -0.29
GPNMB-206ENST00000465673 NEXNQ0ZGT2 675 aa13.24□□□□□ -0.29
GPNMB-206ENST00000465673 FBXO46Q6PJ61 603 aaPredicted RBP13.24□□□□□ -0.29
GPNMB-206ENST00000465673 HELBQ8NG08 1087 aaPredicted RBP13.24□□□□□ -0.29
GPNMB-206ENST00000465673 JAG2Q9Y219 1238 aa13.24□□□□□ -0.29
GPNMB-206ENST00000465673 CLRN2A0PK11 232 aa13.23□□□□□ -0.29
GPNMB-206ENST00000465673 F8W031 263 aaPredicted RBP13.23□□□□□ -0.29
GPNMB-206ENST00000465673 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
GPNMB-206ENST00000465673 CHRNDQ07001 517 aa13.23□□□□□ -0.29
GPNMB-206ENST00000465673 SREBF2Q12772 1141 aa13.23□□□□□ -0.29
GPNMB-206ENST00000465673 GCKRQ14397 625 aa13.23□□□□□ -0.29
GPNMB-206ENST00000465673 CCDC184Q52MB2 194 aa13.23□□□□□ -0.29
GPNMB-206ENST00000465673 APOBEC3FQ8IUX4 373 aaKnown RBP13.23□□□□□ -0.29
GPNMB-206ENST00000465673 STK31Q9BXU1 1019 aa13.23□□□□□ -0.29
GPNMB-206ENST00000465673 DEFB129Q9H1M3 183 aa13.23□□□□□ -0.29
GPNMB-206ENST00000465673 CD209Q9NNX6 404 aa13.23□□□□□ -0.29
GPNMB-206ENST00000465673 MYH3P11055 1940 aa13.22□□□□□ -0.29
GPNMB-206ENST00000465673 CSF1RP07333 972 aa13.22□□□□□ -0.29
GPNMB-206ENST00000465673 KCNJ4P48050 445 aa13.22□□□□□ -0.29
GPNMB-206ENST00000465673 DLGAP5Q15398 846 aa13.22□□□□□ -0.29
GPNMB-206ENST00000465673 TWISTNBQ3B726 338 aaPredicted RBP13.22□□□□□ -0.29
GPNMB-206ENST00000465673 NOM1Q5C9Z4 860 aaKnown RBP13.22□□□□□ -0.29
GPNMB-206ENST00000465673 SLC10A4Q96EP9 437 aa13.22□□□□□ -0.29
GPNMB-206ENST00000465673 MPHOSPH8Q99549 860 aa13.22□□□□□ -0.29
GPNMB-206ENST00000465673 ANKRD2Q9GZV1 360 aa13.22□□□□□ -0.29
GPNMB-206ENST00000465673 SSC5DA1L4H1 1573 aa13.22□□□□□ -0.29
GPNMB-206ENST00000465673 IRS2Q9Y4H2 1338 aa13.21□□□□□ -0.29
GPNMB-206ENST00000465673 POTEFA5A3E0 1075 aa13.21□□□□□ -0.29
GPNMB-206ENST00000465673 IGF2BP3O00425 579 aaKnown RBP eCLIP13.21□□□□□ -0.29
GPNMB-206ENST00000465673 IFNL1Q8IU54 200 aa13.21□□□□□ -0.29
GPNMB-206ENST00000465673 PRMT6Q96LA8 375 aaPredicted RBP13.21□□□□□ -0.29
GPNMB-206ENST00000465673 PLA2G12BQ9BX93 195 aa13.21□□□□□ -0.29
GPNMB-206ENST00000465673 CFHR5Q9BXR6 569 aa13.21□□□□□ -0.29
GPNMB-206ENST00000465673 TRIM17Q9Y577 477 aa13.21□□□□□ -0.29
GPNMB-206ENST00000465673 GJA5P36382 358 aa13.2□□□□□ -0.3
GPNMB-206ENST00000465673 CAP1Q01518 475 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms