RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 ATP2B4P23634 1241 aa12.47□□□□□ -0.41
CTNNB1-211ENST00000465552 KLRK1P26718 216 aa12.47□□□□□ -0.41
CTNNB1-211ENST00000465552 CXCL9Q07325 125 aa12.47□□□□□ -0.41
CTNNB1-211ENST00000465552 EAPPQ56P03 285 aaPredicted RBP12.47□□□□□ -0.41
CTNNB1-211ENST00000465552 ZKSCAN2Q63HK3 967 aa12.47□□□□□ -0.41
CTNNB1-211ENST00000465552 GPC2Q8N158 579 aa12.47□□□□□ -0.41
CTNNB1-211ENST00000465552 ZNRF3Q9ULT6 936 aa12.47□□□□□ -0.41
CTNNB1-211ENST00000465552 LRRFIP2Q9Y608 721 aaKnown RBP12.47□□□□□ -0.41
CTNNB1-211ENST00000465552 MYO5AQ9Y4I1 1855 aaKnown RBP12.46□□□□□ -0.41
CTNNB1-211ENST00000465552 MED23Q9ULK4 1368 aa12.46□□□□□ -0.41
CTNNB1-211ENST00000465552 IPO8O15397 1037 aaKnown RBP12.46□□□□□ -0.41
CTNNB1-211ENST00000465552 KCNJ4P48050 445 aa12.46□□□□□ -0.41
CTNNB1-211ENST00000465552 RABL6Q3YEC7 729 aaPredicted RBP12.46□□□□□ -0.41
CTNNB1-211ENST00000465552 CIAPIN1Q6FI81 312 aa12.46□□□□□ -0.41
CTNNB1-211ENST00000465552 LDHAL6AQ6ZMR3 332 aa12.46□□□□□ -0.41
CTNNB1-211ENST00000465552 TMEM57Q8N5G2 664 aa12.46□□□□□ -0.41
CTNNB1-211ENST00000465552 ARHGAP45Q92619 1136 aa12.46□□□□□ -0.41
CTNNB1-211ENST00000465552 L3MBTL3Q96JM7 780 aaPredicted RBP12.46□□□□□ -0.41
CTNNB1-211ENST00000465552 PUS3Q9BZE2 481 aaKnown RBP12.46□□□□□ -0.41
CTNNB1-211ENST00000465552 ZC3H12CQ9C0D7 883 aaKnown RBP12.46□□□□□ -0.41
CTNNB1-211ENST00000465552 VPS33BQ9H267 617 aa12.46□□□□□ -0.41
CTNNB1-211ENST00000465552 KCNQ5Q9NR82 932 aa12.46□□□□□ -0.41
CTNNB1-211ENST00000465552 HACL1Q9UJ83 578 aa12.46□□□□□ -0.41
CTNNB1-211ENST00000465552 LMOD1P29536 600 aaPredicted RBP12.45□□□□□ -0.42
CTNNB1-211ENST00000465552 SCNN1DP51172 638 aa12.45□□□□□ -0.42
CTNNB1-211ENST00000465552 INTS3Q68E01 1043 aaKnown RBP12.45□□□□□ -0.42
CTNNB1-211ENST00000465552 TXNRD3Q86VQ6 643 aa12.45□□□□□ -0.42
CTNNB1-211ENST00000465552 FTSJ3Q8IY81 847 aaKnown RBP12.45□□□□□ -0.42
CTNNB1-211ENST00000465552 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
CTNNB1-211ENST00000465552 FBXW7Q969H0 707 aa12.45□□□□□ -0.42
CTNNB1-211ENST00000465552 ZNF804BA4D1E1 1349 aa12.44□□□□□ -0.42
CTNNB1-211ENST00000465552 SHTN1A0MZ66 631 aa12.44□□□□□ -0.42
CTNNB1-211ENST00000465552 IQCA1LA6NCM1 817 aa12.44□□□□□ -0.42
CTNNB1-211ENST00000465552 PSMD14O00487 310 aa12.44□□□□□ -0.42
CTNNB1-211ENST00000465552 RLBP1P12271 317 aa12.44□□□□□ -0.42
CTNNB1-211ENST00000465552 EPHX2P34913 555 aa12.44□□□□□ -0.42
CTNNB1-211ENST00000465552 EPS15P42566 896 aa12.44□□□□□ -0.42
CTNNB1-211ENST00000465552 GMPSP49915 693 aaPredicted RBP12.44□□□□□ -0.42
CTNNB1-211ENST00000465552 LRRC24Q50LG9 513 aa12.44□□□□□ -0.42
CTNNB1-211ENST00000465552 ITPRIPQ8IWB1 547 aa12.44□□□□□ -0.42
CTNNB1-211ENST00000465552 RBM46Q8TBY0 533 aaKnown RBP12.44□□□□□ -0.42
CTNNB1-211ENST00000465552 ANKRD2Q9GZV1 360 aa12.44□□□□□ -0.42
CTNNB1-211ENST00000465552 TAF1DQ9H5J8 278 aaPredicted RBP12.44□□□□□ -0.42
CTNNB1-211ENST00000465552 SMC1BQ8NDV3 1235 aa12.43□□□□□ -0.42
CTNNB1-211ENST00000465552 SIL1Q9H173 461 aa12.43□□□□□ -0.42
CTNNB1-211ENST00000465552 MYH2Q9UKX2 1941 aa12.43□□□□□ -0.42
CTNNB1-211ENST00000465552 TNIP1Q15025 636 aa12.42□□□□□ -0.42
CTNNB1-211ENST00000465552 DZIP1LQ8IYY4 767 aaKnown RBP12.42□□□□□ -0.42
CTNNB1-211ENST00000465552 PANK1Q8TE04 598 aa12.42□□□□□ -0.42
CTNNB1-211ENST00000465552 C1orf115Q9H7X2 142 aa12.42□□□□□ -0.42
CTNNB1-211ENST00000465552 GPRC5DQ9NZD1 345 aa12.42□□□□□ -0.42
CTNNB1-211ENST00000465552 RCAN3Q9UKA8 241 aa12.42□□□□□ -0.42
CTNNB1-211ENST00000465552 LEMD3Q9Y2U8 911 aa12.42□□□□□ -0.42
CTNNB1-211ENST00000465552 AK9Q5TCS8 1911 aa12.41□□□□□ -0.42
CTNNB1-211ENST00000465552 GNAI3P08754 354 aa12.41□□□□□ -0.42
CTNNB1-211ENST00000465552 RFX5P48382 616 aaPredicted RBP12.41□□□□□ -0.42
CTNNB1-211ENST00000465552 METTL24Q5JXM2 366 aa12.41□□□□□ -0.42
CTNNB1-211ENST00000465552 MXD3Q9BW11 206 aa12.41□□□□□ -0.42
CTNNB1-211ENST00000465552 PA2G4Q9UQ80 394 aaKnown RBP12.41□□□□□ -0.42
CTNNB1-211ENST00000465552 HSPA6P17066 643 aa12.4□□□□□ -0.42
CTNNB1-211ENST00000465552 HTRA3P83110 453 aa12.4□□□□□ -0.42
CTNNB1-211ENST00000465552 PTPN12Q05209 780 aaKnown RBP12.4□□□□□ -0.42
CTNNB1-211ENST00000465552 MICALL2Q8IY33 904 aa12.4□□□□□ -0.42
CTNNB1-211ENST00000465552 TRPM4Q8TD43 1214 aa12.4□□□□□ -0.42
CTNNB1-211ENST00000465552 JAG2Q9Y219 1238 aa12.4□□□□□ -0.42
CTNNB1-211ENST00000465552 MROH5Q6ZUA9 1318 aa12.39□□□□□ -0.43
CTNNB1-211ENST00000465552 IRS2Q9Y4H2 1338 aa12.39□□□□□ -0.43
CTNNB1-211ENST00000465552 FSTL1Q12841 308 aa12.39□□□□□ -0.43
CTNNB1-211ENST00000465552 MAP1SQ66K74 1059 aaPredicted RBP12.39□□□□□ -0.43
CTNNB1-211ENST00000465552 LDHDQ86WU2 507 aa12.39□□□□□ -0.43
CTNNB1-211ENST00000465552 CNOT7Q9UIV1 285 aaKnown RBP12.39□□□□□ -0.43
CTNNB1-211ENST00000465552 RIPOR2Q9Y4F9 1068 aa12.39□□□□□ -0.43
CTNNB1-211ENST00000465552 AKAP11Q9UKA4 1901 aa12.39□□□□□ -0.43
CTNNB1-211ENST00000465552 EYA2O00167 538 aa12.38□□□□□ -0.43
CTNNB1-211ENST00000465552 SRGAP3O43295 1099 aa12.38□□□□□ -0.43
CTNNB1-211ENST00000465552 EGFRP00533 1210 aa12.38□□□□□ -0.43
CTNNB1-211ENST00000465552 GNAI2P04899 355 aa12.38□□□□□ -0.43
CTNNB1-211ENST00000465552 GYG1P46976 350 aa12.38□□□□□ -0.43
CTNNB1-211ENST00000465552 TBC1D10BQ4KMP7 808 aaPredicted RBP12.38□□□□□ -0.43
CTNNB1-211ENST00000465552 RBM26Q5T8P6 1007 aaKnown RBP12.38□□□□□ -0.43
CTNNB1-211ENST00000465552 SAMD7Q7Z3H4 446 aa12.38□□□□□ -0.43
CTNNB1-211ENST00000465552 ZNF804AQ7Z570 1209 aa12.38□□□□□ -0.43
CTNNB1-211ENST00000465552 PNMA8AQ86V59 439 aaPredicted RBP12.38□□□□□ -0.43
CTNNB1-211ENST00000465552 COA1Q9GZY4 146 aa12.38□□□□□ -0.43
CTNNB1-211ENST00000465552 ADARB2Q9NS39 739 aaKnown RBP12.38□□□□□ -0.43
CTNNB1-211ENST00000465552 IQSEC3Q9UPP2 1182 aaPredicted RBP12.38□□□□□ -0.43
CTNNB1-211ENST00000465552 CDK5RAP2Q96SN8 1893 aa12.38□□□□□ -0.43
CTNNB1-211ENST00000465552 PNMA6EA0A0J9YXQ4 647 aa12.37□□□□□ -0.43
CTNNB1-211ENST00000465552 USP17L3A6NCW0 530 aa12.37□□□□□ -0.43
CTNNB1-211ENST00000465552 USP17L4A6NCW7 530 aa12.37□□□□□ -0.43
CTNNB1-211ENST00000465552 H7C1D1 291 aa12.37□□□□□ -0.43
CTNNB1-211ENST00000465552 VIL1P09327 827 aaKnown RBP12.37□□□□□ -0.43
CTNNB1-211ENST00000465552 MNX1P50219 401 aaPredicted RBP12.37□□□□□ -0.43
CTNNB1-211ENST00000465552 GTF2IP78347 998 aa12.37□□□□□ -0.43
CTNNB1-211ENST00000465552 RSBN1LQ6PCB5 846 aaPredicted RBP12.37□□□□□ -0.43
CTNNB1-211ENST00000465552 USP17L1Q7RTZ2 530 aa12.37□□□□□ -0.43
CTNNB1-211ENST00000465552 ATG9AQ7Z3C6 839 aa12.37□□□□□ -0.43
CTNNB1-211ENST00000465552 PODNQ7Z5L7 613 aa12.37□□□□□ -0.43
CTNNB1-211ENST00000465552 VGLL2Q8N8G2 317 aa12.37□□□□□ -0.43
CTNNB1-211ENST00000465552 CD209Q9NNX6 404 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms