RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 USP17L3A6NCW0 530 aa14.11□□□□□ -0.15
COL11A1-207ENST00000465209 USP17L4A6NCW7 530 aa14.11□□□□□ -0.15
COL11A1-207ENST00000465209 DDX58O95786 925 aaKnown RBP14.11□□□□□ -0.15
COL11A1-207ENST00000465209 USP17L8P0C7I0 530 aa14.11□□□□□ -0.15
COL11A1-207ENST00000465209 DACT2Q5SW24 774 aa14.11□□□□□ -0.15
COL11A1-207ENST00000465209 KSR2Q6VAB6 950 aa14.11□□□□□ -0.15
COL11A1-207ENST00000465209 USP17L1Q7RTZ2 530 aa14.11□□□□□ -0.15
COL11A1-207ENST00000465209 SCAF8Q9UPN6 1271 aaKnown RBP14.11□□□□□ -0.15
COL11A1-207ENST00000465209 NEURL1BA8MQ27 555 aa14.1□□□□□ -0.15
COL11A1-207ENST00000465209 TRPA1O75762 1119 aa14.1□□□□□ -0.15
COL11A1-207ENST00000465209 FKBP1BP68106 108 aa14.1□□□□□ -0.15
COL11A1-207ENST00000465209 CWF19L2Q2TBE0 894 aaKnown RBP14.1□□□□□ -0.15
COL11A1-207ENST00000465209 G2E3Q7L622 706 aa14.1□□□□□ -0.15
COL11A1-207ENST00000465209 TXNRD3Q86VQ6 643 aa14.1□□□□□ -0.15
COL11A1-207ENST00000465209 TSR2Q969E8 191 aaKnown RBP14.1□□□□□ -0.15
COL11A1-207ENST00000465209 CDC5LQ99459 802 aaKnown RBP14.1□□□□□ -0.15
COL11A1-207ENST00000465209 MXD3Q9BW11 206 aa14.1□□□□□ -0.15
COL11A1-207ENST00000465209 H7C1W4 665 aa14.09□□□□□ -0.15
COL11A1-207ENST00000465209 CCT4P50991 539 aaKnown RBP14.09□□□□□ -0.15
COL11A1-207ENST00000465209 CASP7P55210 303 aa14.09□□□□□ -0.15
COL11A1-207ENST00000465209 NBPF9Q3BBW0 867 aa14.09□□□□□ -0.15
COL11A1-207ENST00000465209 MOB2Q70IA6 237 aa14.09□□□□□ -0.15
COL11A1-207ENST00000465209 PLA2G12BQ9BX93 195 aa14.09□□□□□ -0.15
COL11A1-207ENST00000465209 IRS2Q9Y4H2 1338 aa14.09□□□□□ -0.15
COL11A1-207ENST00000465209 G3V3G9 751 aa14.08□□□□□ -0.16
COL11A1-207ENST00000465209 WNT10BO00744 389 aa14.08□□□□□ -0.16
COL11A1-207ENST00000465209 KLRK1P26718 216 aa14.08□□□□□ -0.16
COL11A1-207ENST00000465209 CCDC27Q2M243 656 aa14.08□□□□□ -0.16
COL11A1-207ENST00000465209 CCDC184Q52MB2 194 aa14.08□□□□□ -0.16
COL11A1-207ENST00000465209 DCAF8Q5TAQ9 597 aa14.08□□□□□ -0.16
COL11A1-207ENST00000465209 STRIP1Q5VSL9 837 aa14.07□□□□□ -0.16
COL11A1-207ENST00000465209 PRAMEF18Q5VWM3 479 aa14.07□□□□□ -0.16
COL11A1-207ENST00000465209 REM2Q8IYK8 340 aaPredicted RBP14.07□□□□□ -0.16
COL11A1-207ENST00000465209 ZBED3Q96IU2 234 aaPredicted RBP14.07□□□□□ -0.16
COL11A1-207ENST00000465209 CHMP4AQ9BY43 222 aa14.07□□□□□ -0.16
COL11A1-207ENST00000465209 UBE3BQ7Z3V4 1068 aa14.06□□□□□ -0.16
COL11A1-207ENST00000465209 COA1Q9GZY4 146 aa14.06□□□□□ -0.16
COL11A1-207ENST00000465209 LEMD3Q9Y2U8 911 aa14.06□□□□□ -0.16
COL11A1-207ENST00000465209 MYO3BQ8WXR4 1341 aa14.06□□□□□ -0.16
COL11A1-207ENST00000465209 SSC5DA1L4H1 1573 aa14.05□□□□□ -0.16
COL11A1-207ENST00000465209 CSF1RP07333 972 aa14.05□□□□□ -0.16
COL11A1-207ENST00000465209 GCKRQ14397 625 aa14.05□□□□□ -0.16
COL11A1-207ENST00000465209 TWISTNBQ3B726 338 aaPredicted RBP14.05□□□□□ -0.16
COL11A1-207ENST00000465209 CTU1Q7Z7A3 348 aaKnown RBP14.05□□□□□ -0.16
COL11A1-207ENST00000465209 WWC1Q8IX03 1113 aa14.05□□□□□ -0.16
COL11A1-207ENST00000465209 UBE2Q2LH0YL09 131 aa14.04□□□□□ -0.16
COL11A1-207ENST00000465209 SASH1O94885 1247 aa14.04□□□□□ -0.16
COL11A1-207ENST00000465209 ITGA6P23229 1130 aa14.04□□□□□ -0.16
COL11A1-207ENST00000465209 NEXNQ0ZGT2 675 aa14.04□□□□□ -0.16
COL11A1-207ENST00000465209 FLIIQ13045 1269 aa14.04□□□□□ -0.16
COL11A1-207ENST00000465209 STK31Q9BXU1 1019 aa14.04□□□□□ -0.16
COL11A1-207ENST00000465209 ZNF804BA4D1E1 1349 aa14.04□□□□□ -0.16
COL11A1-207ENST00000465209 IL16Q14005 1332 aa14.04□□□□□ -0.16
COL11A1-207ENST00000465209 COL1A1P02452 1464 aaPredicted RBP14.04□□□□□ -0.16
COL11A1-207ENST00000465209 ARAP2Q8WZ64 1704 aa14.04□□□□□ -0.16
COL11A1-207ENST00000465209 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
COL11A1-207ENST00000465209 TM4SF4P48230 202 aa14.03□□□□□ -0.16
COL11A1-207ENST00000465209 MMP14P50281 582 aa14.03□□□□□ -0.16
COL11A1-207ENST00000465209 SOX10P56693 466 aa14.03□□□□□ -0.16
COL11A1-207ENST00000465209 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
COL11A1-207ENST00000465209 OTOFQ9HC10 1997 aa14.03□□□□□ -0.16
COL11A1-207ENST00000465209 FANCIQ9NVI1 1328 aa14.02□□□□□ -0.17
COL11A1-207ENST00000465209 IGHMBP2P38935 993 aaKnown RBP14.02□□□□□ -0.17
COL11A1-207ENST00000465209 NOM1Q5C9Z4 860 aaKnown RBP14.02□□□□□ -0.17
COL11A1-207ENST00000465209 OGFOD1Q8N543 542 aa14.02□□□□□ -0.17
COL11A1-207ENST00000465209 CERS5Q8N5B7 392 aa14.02□□□□□ -0.17
COL11A1-207ENST00000465209 ZNF296Q8WUU4 475 aaPredicted RBP14.02□□□□□ -0.17
COL11A1-207ENST00000465209 CFHR5Q9BXR6 569 aa14.02□□□□□ -0.17
COL11A1-207ENST00000465209 SNAP23O00161 211 aa14.01□□□□□ -0.17
COL11A1-207ENST00000465209 CHRNDQ07001 517 aa14.01□□□□□ -0.17
COL11A1-207ENST00000465209 LDLRAD1Q5T700 205 aa14.01□□□□□ -0.17
COL11A1-207ENST00000465209 TTLL5Q6EMB2 1281 aa14.01□□□□□ -0.17
COL11A1-207ENST00000465209 C15orf52Q6ZUT6 534 aaKnown RBP14.01□□□□□ -0.17
COL11A1-207ENST00000465209 KIAA0825Q8IV33 1275 aa14.01□□□□□ -0.17
COL11A1-207ENST00000465209 LINS1Q8NG48 757 aa14.01□□□□□ -0.17
COL11A1-207ENST00000465209 DNAAF4Q8WXU2 420 aa14.01□□□□□ -0.17
COL11A1-207ENST00000465209 ANKRD2Q9GZV1 360 aa14.01□□□□□ -0.17
COL11A1-207ENST00000465209 HPS5Q9UPZ3 1129 aa14.01□□□□□ -0.17
COL11A1-207ENST00000465209 TBC1D8O95759 1140 aa14□□□□□ -0.17
COL11A1-207ENST00000465209 GTF2IP78347 998 aa14□□□□□ -0.17
COL11A1-207ENST00000465209 FOXO4P98177 505 aa14□□□□□ -0.17
COL11A1-207ENST00000465209 PTPN12Q05209 780 aaKnown RBP14□□□□□ -0.17
COL11A1-207ENST00000465209 APOBEC3FQ8IUX4 373 aaKnown RBP14□□□□□ -0.17
COL11A1-207ENST00000465209 MTMR14Q8NCE2 650 aa14□□□□□ -0.17
COL11A1-207ENST00000465209 FBXW7Q969H0 707 aa14□□□□□ -0.17
COL11A1-207ENST00000465209 CD209Q9NNX6 404 aa14□□□□□ -0.17
COL11A1-207ENST00000465209 AOX1Q06278 1338 aa13.99□□□□□ -0.17
COL11A1-207ENST00000465209 VAMP4O75379 141 aa13.99□□□□□ -0.17
COL11A1-207ENST00000465209 MAP3K11Q16584 847 aa13.99□□□□□ -0.17
COL11A1-207ENST00000465209 MPHOSPH8Q99549 860 aa13.99□□□□□ -0.17
COL11A1-207ENST00000465209 R3HDMLQ9H3Y0 253 aa13.99□□□□□ -0.17
COL11A1-207ENST00000465209 MYH16Q9H6N6 1097 aa13.99□□□□□ -0.17
COL11A1-207ENST00000465209 FZD1Q9UP38 647 aa13.99□□□□□ -0.17
COL11A1-207ENST00000465209 PCDHAC2Q9Y5I4 1007 aa13.99□□□□□ -0.17
COL11A1-207ENST00000465209 GPR25O00155 361 aa13.98□□□□□ -0.17
COL11A1-207ENST00000465209 NF2P35240 595 aa13.98□□□□□ -0.17
COL11A1-207ENST00000465209 MKRN3Q13064 507 aaKnown RBP13.98□□□□□ -0.17
COL11A1-207ENST00000465209 FKBP5Q13451 457 aaPredicted RBP13.98□□□□□ -0.17
COL11A1-207ENST00000465209 PKN2Q16513 984 aaKnown RBP13.98□□□□□ -0.17
COL11A1-207ENST00000465209 RBBP6Q7Z6E9 1792 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms