RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 NBPF9Q3BBW0 867 aa18.83■□□□□ 0.6
MCF2L-220ENST00000464800 CCDC30Q5VVM6 783 aa18.83■□□□□ 0.6
MCF2L-220ENST00000464800 OGFOD1Q8N543 542 aa18.83■□□□□ 0.6
MCF2L-220ENST00000464800 CHMP4AQ9BY43 222 aa18.83■□□□□ 0.6
MCF2L-220ENST00000464800 HPS5Q9UPZ3 1129 aa18.83■□□□□ 0.6
MCF2L-220ENST00000464800 MAP3K2Q9Y2U5 619 aa18.83■□□□□ 0.6
MCF2L-220ENST00000464800 PRAMEF18Q5VWM3 479 aa18.82■□□□□ 0.6
MCF2L-220ENST00000464800 C8orf58Q8NAV2 365 aa18.82■□□□□ 0.6
MCF2L-220ENST00000464800 ZNF296Q8WUU4 475 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-220ENST00000464800 FBXW7Q969H0 707 aa18.82■□□□□ 0.6
MCF2L-220ENST00000464800 BSDC1Q9NW68 430 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-220ENST00000464800 WTIPA6NIX2 430 aaPredicted RBP18.81■□□□□ 0.6
MCF2L-220ENST00000464800 APAF1O14727 1248 aa18.81■□□□□ 0.6
MCF2L-220ENST00000464800 TBC1D8O95759 1140 aa18.81■□□□□ 0.6
MCF2L-220ENST00000464800 DACT2Q5SW24 774 aa18.81■□□□□ 0.6
MCF2L-220ENST00000464800 GREM2Q9H772 168 aa18.81■□□□□ 0.6
MCF2L-220ENST00000464800 MINPP1Q9UNW1 487 aa18.81■□□□□ 0.6
MCF2L-220ENST00000464800 WNT10BO00744 389 aa18.8■□□□□ 0.6
MCF2L-220ENST00000464800 CCT4P50991 539 aaKnown RBP18.8■□□□□ 0.6
MCF2L-220ENST00000464800 STRIP1Q5VSL9 837 aa18.8■□□□□ 0.6
MCF2L-220ENST00000464800 PRPF38BQ5VTL8 546 aaKnown RBP18.8■□□□□ 0.6
MCF2L-220ENST00000464800 TTLL11Q8NHH1 800 aa18.8■□□□□ 0.6
MCF2L-220ENST00000464800 MXD3Q9BW11 206 aa18.8■□□□□ 0.6
MCF2L-220ENST00000464800 COA1Q9GZY4 146 aa18.8■□□□□ 0.6
MCF2L-220ENST00000464800 ECM29Q5VYK3 1845 aa18.79■□□□□ 0.6
MCF2L-220ENST00000464800 SASH1O94885 1247 aa18.79■□□□□ 0.6
MCF2L-220ENST00000464800 TM4SF4P48230 202 aa18.79■□□□□ 0.6
MCF2L-220ENST00000464800 NEXNQ0ZGT2 675 aa18.79■□□□□ 0.6
MCF2L-220ENST00000464800 SREBF2Q12772 1141 aa18.79■□□□□ 0.6
MCF2L-220ENST00000464800 KSR2Q6VAB6 950 aa18.79■□□□□ 0.6
MCF2L-220ENST00000464800 PI4KAP2A4QPH2 592 aa18.78■□□□□ 0.6
MCF2L-220ENST00000464800 IGKV5-2P06315 115 aa18.78■□□□□ 0.6
MCF2L-220ENST00000464800 MMP14P50281 582 aa18.78■□□□□ 0.6
MCF2L-220ENST00000464800 MKRN3Q13064 507 aaKnown RBP18.78■□□□□ 0.6
MCF2L-220ENST00000464800 NOM1Q5C9Z4 860 aaKnown RBP18.78■□□□□ 0.6
MCF2L-220ENST00000464800 PI4KAP1Q8N8J0 262 aa18.78■□□□□ 0.6
MCF2L-220ENST00000464800 GPR25O00155 361 aa18.77■□□□□ 0.6
MCF2L-220ENST00000464800 ARMC9Q7Z3E5 817 aa18.77■□□□□ 0.6
MCF2L-220ENST00000464800 APOBEC3FQ8IUX4 373 aaKnown RBP18.77■□□□□ 0.6
MCF2L-220ENST00000464800 LEMD3Q9Y2U8 911 aa18.77■□□□□ 0.6
MCF2L-220ENST00000464800 LAMB1P07942 1786 aa18.77■□□□□ 0.6
MCF2L-220ENST00000464800 COL1A1P02452 1464 aaPredicted RBP18.77■□□□□ 0.59
MCF2L-220ENST00000464800 IGHMBP2P38935 993 aaKnown RBP18.76■□□□□ 0.59
MCF2L-220ENST00000464800 CWF19L2Q2TBE0 894 aaKnown RBP18.76■□□□□ 0.59
MCF2L-220ENST00000464800 TSPYL6Q8N831 410 aa18.76■□□□□ 0.59
MCF2L-220ENST00000464800 STK31Q9BXU1 1019 aa18.76■□□□□ 0.59
MCF2L-220ENST00000464800 A0A1B0GUL6 1792 aa18.76■□□□□ 0.59
MCF2L-220ENST00000464800 NEURL1BA8MQ27 555 aa18.75■□□□□ 0.59
MCF2L-220ENST00000464800 PTPN12Q05209 780 aaKnown RBP18.75■□□□□ 0.59
MCF2L-220ENST00000464800 TTLL5Q6EMB2 1281 aa18.75■□□□□ 0.59
MCF2L-220ENST00000464800 FBXO46Q6PJ61 603 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-220ENST00000464800 UBE3BQ7Z3V4 1068 aa18.75■□□□□ 0.59
MCF2L-220ENST00000464800 TXNRD3Q86VQ6 643 aa18.75■□□□□ 0.59
MCF2L-220ENST00000464800 KIAA0825Q8IV33 1275 aa18.75■□□□□ 0.59
MCF2L-220ENST00000464800 ZNF804BA4D1E1 1349 aa18.74■□□□□ 0.59
MCF2L-220ENST00000464800 FKTNO75072 461 aa18.74■□□□□ 0.59
MCF2L-220ENST00000464800 PRKG1Q13976 671 aa18.74■□□□□ 0.59
MCF2L-220ENST00000464800 CFHR5Q9BXR6 569 aa18.74■□□□□ 0.59
MCF2L-220ENST00000464800 ANKRD2Q9GZV1 360 aa18.74■□□□□ 0.59
MCF2L-220ENST00000464800 PRKRIP1Q9H875 184 aaPredicted RBP18.74■□□□□ 0.59
MCF2L-220ENST00000464800 KLRK1P26718 216 aa18.73■□□□□ 0.59
MCF2L-220ENST00000464800 H7C1W4 665 aa18.72■□□□□ 0.59
MCF2L-220ENST00000464800 ITGA6P23229 1130 aa18.72■□□□□ 0.59
MCF2L-220ENST00000464800 KCNJ4P48050 445 aa18.72■□□□□ 0.59
MCF2L-220ENST00000464800 GTF2IP78347 998 aa18.72■□□□□ 0.59
MCF2L-220ENST00000464800 SPRYD7Q5W111 196 aa18.72■□□□□ 0.59
MCF2L-220ENST00000464800 MPHOSPH8Q99549 860 aa18.72■□□□□ 0.59
MCF2L-220ENST00000464800 ANGEL1Q9UNK9 670 aaKnown RBP18.72■□□□□ 0.59
MCF2L-220ENST00000464800 ALDH1A1P00352 501 aa18.71■□□□□ 0.59
MCF2L-220ENST00000464800 LDLRAD1Q5T700 205 aa18.71■□□□□ 0.59
MCF2L-220ENST00000464800 TSR2Q969E8 191 aaKnown RBP18.71■□□□□ 0.59
MCF2L-220ENST00000464800 ZBED3Q96IU2 234 aaPredicted RBP18.71■□□□□ 0.59
MCF2L-220ENST00000464800 PLA2G12BQ9BX93 195 aa18.71■□□□□ 0.59
MCF2L-220ENST00000464800 CACNA1FO60840 1977 aa18.71■□□□□ 0.59
MCF2L-220ENST00000464800 R3HDMLQ9H3Y0 253 aa18.7■□□□□ 0.58
MCF2L-220ENST00000464800 SSC5DA1L4H1 1573 aa18.69■□□□□ 0.58
MCF2L-220ENST00000464800 MANSC4A6NHS7 340 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-220ENST00000464800 GCKRQ14397 625 aa18.69■□□□□ 0.58
MCF2L-220ENST00000464800 DLGAP5Q15398 846 aa18.69■□□□□ 0.58
MCF2L-220ENST00000464800 TWISTNBQ3B726 338 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-220ENST00000464800 G2E3Q7L622 706 aa18.69■□□□□ 0.58
MCF2L-220ENST00000464800 DEFB129Q9H1M3 183 aa18.69■□□□□ 0.58
MCF2L-220ENST00000464800 MYH16Q9H6N6 1097 aa18.69■□□□□ 0.58
MCF2L-220ENST00000464800 RBBP6Q7Z6E9 1792 aaKnown RBP18.68■□□□□ 0.58
MCF2L-220ENST00000464800 CHRNDQ07001 517 aa18.68■□□□□ 0.58
MCF2L-220ENST00000464800 SLC10A4Q96EP9 437 aa18.68■□□□□ 0.58
MCF2L-220ENST00000464800 CD209Q9NNX6 404 aa18.68■□□□□ 0.58
MCF2L-220ENST00000464800 FZD1Q9UP38 647 aa18.68■□□□□ 0.58
MCF2L-220ENST00000464800 PPP2R3BQ9Y5P8 575 aa18.68■□□□□ 0.58
MCF2L-220ENST00000464800 SLC4A2P04920 1241 aa18.67■□□□□ 0.58
MCF2L-220ENST00000464800 ZBTB48P10074 688 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-220ENST00000464800 INHBEP58166 350 aa18.67■□□□□ 0.58
MCF2L-220ENST00000464800 MAP3K11Q16584 847 aa18.67■□□□□ 0.58
MCF2L-220ENST00000464800 IFNL1Q8IU54 200 aa18.67■□□□□ 0.58
MCF2L-220ENST00000464800 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-220ENST00000464800 OTOFQ9HC10 1997 aa18.67■□□□□ 0.58
MCF2L-220ENST00000464800 ANKRD18BA2A2Z9 1011 aa18.66■□□□□ 0.58
MCF2L-220ENST00000464800 MYO1BO43795 1136 aa18.66■□□□□ 0.58
MCF2L-220ENST00000464800 PPP1R12BO60237 982 aaPredicted RBP18.66■□□□□ 0.58
MCF2L-220ENST00000464800 CSF1RP07333 972 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms