RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 MICALL1Q8N3F8 863 aa6□□□□□ -1.45
HMGXB4-205ENST00000464480 TMEM102Q8N9M5 508 aaPredicted RBP6□□□□□ -1.45
HMGXB4-205ENST00000464480 ELOA3Q8NG57 546 aa6□□□□□ -1.45
HMGXB4-205ENST00000464480 DZANK1Q9NVP4 752 aa6□□□□□ -1.45
HMGXB4-205ENST00000464480 ALAS2P22557 587 aa5.99□□□□□ -1.45
HMGXB4-205ENST00000464480 ELMSAN1Q6PJG2 1045 aa5.99□□□□□ -1.45
HMGXB4-205ENST00000464480 DTHD1Q6ZMT9 781 aa5.99□□□□□ -1.45
HMGXB4-205ENST00000464480 CCNJLQ8IV13 435 aa5.99□□□□□ -1.45
HMGXB4-205ENST00000464480 GLIS3Q8NEA6 775 aa5.99□□□□□ -1.45
HMGXB4-205ENST00000464480 OXCT2Q9BYC2 517 aaPredicted RBP5.99□□□□□ -1.45
HMGXB4-205ENST00000464480 PBX4Q9BYU1 374 aa5.99□□□□□ -1.45
HMGXB4-205ENST00000464480 BHLHE41Q9C0J9 482 aaPredicted RBP5.99□□□□□ -1.45
HMGXB4-205ENST00000464480 RASSF4Q9H2L5 321 aa5.99□□□□□ -1.45
HMGXB4-205ENST00000464480 ZFYVE1Q9HBF4 777 aa5.99□□□□□ -1.45
HMGXB4-205ENST00000464480 ABCB6Q9NP58 842 aa5.99□□□□□ -1.45
HMGXB4-205ENST00000464480 GGA1Q9UJY5 639 aa5.99□□□□□ -1.45
HMGXB4-205ENST00000464480 TMEM238LA0A1B0GVL6 79 aa5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 PDE2AO00408 941 aaPredicted RBP5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 CTSHP09668 335 aa5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 ZNF76P36508 570 aa5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 ST13P50502 369 aaKnown RBP5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 FCGRTP55899 365 aa5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 ATP11AP98196 1134 aa5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 RNFT1Q5M7Z0 435 aa5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 LDLRAD1Q5T700 205 aa5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 CEP135Q66GS9 1140 aa5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 FCHSD1Q86WN1 690 aa5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 RNF34Q969K3 372 aa5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 PLD4Q96BZ4 506 aa5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 TCF12Q99081 682 aa5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 FRRS1LQ9P0K9 344 aa5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 KLF15Q9UIH9 416 aa5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 PPM1HQ9ULR3 514 aa5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 TTF2Q9UNY4 1162 aaKnown RBP5.98□□□□□ -1.45
HMGXB4-205ENST00000464480 FAM177BA6PVY3 158 aa5.97□□□□□ -1.45
HMGXB4-205ENST00000464480 NFKBIEO00221 500 aa5.97□□□□□ -1.45
HMGXB4-205ENST00000464480 FANCCQ00597 558 aa5.97□□□□□ -1.45
HMGXB4-205ENST00000464480 MAP3K10Q02779 954 aa5.97□□□□□ -1.45
HMGXB4-205ENST00000464480 PTPN12Q05209 780 aaKnown RBP5.97□□□□□ -1.45
HMGXB4-205ENST00000464480 TAF1CQ15572 869 aaPredicted RBP5.97□□□□□ -1.45
HMGXB4-205ENST00000464480 PERM1Q5SV97 790 aa5.97□□□□□ -1.45
HMGXB4-205ENST00000464480 ASAP3Q8TDY4 903 aa5.97□□□□□ -1.45
HMGXB4-205ENST00000464480 MDFIQ99750 246 aa5.97□□□□□ -1.45
HMGXB4-205ENST00000464480 NAGPAQ9UK23 515 aa5.97□□□□□ -1.45
HMGXB4-205ENST00000464480 USP31Q70CQ4 1352 aa5.96□□□□□ -1.45
HMGXB4-205ENST00000464480 TRPA1O75762 1119 aa5.96□□□□□ -1.46
HMGXB4-205ENST00000464480 ADAMTS2O95450 1211 aa5.96□□□□□ -1.46
HMGXB4-205ENST00000464480 PTPRAP18433 802 aa5.96□□□□□ -1.46
HMGXB4-205ENST00000464480 ITPKAP23677 461 aa5.96□□□□□ -1.46
HMGXB4-205ENST00000464480 HDLBPQ00341 1268 aaKnown RBP5.96□□□□□ -1.46
HMGXB4-205ENST00000464480 MEI1Q5TIA1 1274 aa5.96□□□□□ -1.46
HMGXB4-205ENST00000464480 PSAPL1Q6NUJ1 521 aa5.96□□□□□ -1.46
HMGXB4-205ENST00000464480 KANK3Q6NY19 840 aa5.96□□□□□ -1.46
HMGXB4-205ENST00000464480 SVOPQ8N4V2 548 aa5.96□□□□□ -1.46
HMGXB4-205ENST00000464480 NXPE3Q969Y0 559 aa5.96□□□□□ -1.46
HMGXB4-205ENST00000464480 HHIPQ96QV1 700 aa5.96□□□□□ -1.46
HMGXB4-205ENST00000464480 LPIN3Q9BQK8 851 aa5.96□□□□□ -1.46
HMGXB4-205ENST00000464480 SMG9Q9H0W8 520 aaKnown RBP5.96□□□□□ -1.46
HMGXB4-205ENST00000464480 AKAP2Q9Y2D5 859 aa5.96□□□□□ -1.46
HMGXB4-205ENST00000464480 A0A096LPE4 126 aa5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 A0A1W2PPZ6 126 aa5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 METTL12A8MUP2 240 aa5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 RGS9O75916 674 aaPredicted RBP5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 SLURP2P0DP57 97 aa5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 EPXP11678 715 aa5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 ERCC5P28715 1186 aaPredicted RBP5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 GRIA4P48058 902 aa5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 KRT76Q01546 638 aa5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 HS2ST1Q7LGA3 356 aa5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 CACTIN-AS1Q8N1I8 211 aa5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 C3orf58Q8NDZ4 430 aa5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 ANKRD24Q8TF21 1146 aa5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 BSNDQ8WZ55 320 aa5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 ACDQ96AP0 544 aa5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 ENAMQ9NRM1 1142 aa5.95□□□□□ -1.46
HMGXB4-205ENST00000464480 RNF225M0QZC1 329 aaPredicted RBP5.94□□□□□ -1.46
HMGXB4-205ENST00000464480 RPS26P11Q5JNZ5 115 aaPredicted RBP5.94□□□□□ -1.46
HMGXB4-205ENST00000464480 TTC9Q92623 222 aa5.94□□□□□ -1.46
HMGXB4-205ENST00000464480 POP1Q99575 1024 aaKnown RBP5.94□□□□□ -1.46
HMGXB4-205ENST00000464480 ZNF576Q9H609 170 aa5.94□□□□□ -1.46
HMGXB4-205ENST00000464480 LRRC4BQ9NT99 713 aa5.94□□□□□ -1.46
HMGXB4-205ENST00000464480 CABP4P57796 275 aa5.93□□□□□ -1.46
HMGXB4-205ENST00000464480 CCDC85BQ15834 202 aaPredicted RBP5.93□□□□□ -1.46
HMGXB4-205ENST00000464480 SPRED3Q2MJR0 410 aa5.93□□□□□ -1.46
HMGXB4-205ENST00000464480 NT5DC4Q86YG4 428 aa5.93□□□□□ -1.46
HMGXB4-205ENST00000464480 NUDT8Q8WV74 236 aa5.93□□□□□ -1.46
HMGXB4-205ENST00000464480 EDARADDQ8WWZ3 215 aa5.93□□□□□ -1.46
HMGXB4-205ENST00000464480 NOC4LQ9BVI4 516 aaKnown RBP5.93□□□□□ -1.46
HMGXB4-205ENST00000464480 CEP44Q9C0F1 390 aa5.93□□□□□ -1.46
HMGXB4-205ENST00000464480 CLEC4MQ9H2X3 399 aaPredicted RBP5.93□□□□□ -1.46
HMGXB4-205ENST00000464480 JPH1Q9HDC5 661 aaPredicted RBP5.93□□□□□ -1.46
HMGXB4-205ENST00000464480 GGT7Q9UJ14 662 aa5.93□□□□□ -1.46
HMGXB4-205ENST00000464480 OIP5O43482 229 aa5.92□□□□□ -1.46
HMGXB4-205ENST00000464480 RLBP1P12271 317 aa5.92□□□□□ -1.46
HMGXB4-205ENST00000464480 C9orf131Q5VYM1 1079 aa5.92□□□□□ -1.46
HMGXB4-205ENST00000464480 GDF6Q6KF10 455 aaPredicted RBP5.92□□□□□ -1.46
HMGXB4-205ENST00000464480 TPTE2Q6XPS3 522 aa5.92□□□□□ -1.46
HMGXB4-205ENST00000464480 CHSY3Q70JA7 882 aa5.92□□□□□ -1.46
HMGXB4-205ENST00000464480 SV2BQ7L1I2 683 aa5.92□□□□□ -1.46
HMGXB4-205ENST00000464480 METTL16Q86W50 562 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms