RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 METTL24Q5JXM2 366 aa21.26■□□□□ 0.99
VPS52-215ENST00000464425 PNMA8AQ86V59 439 aaPredicted RBP21.26■□□□□ 0.99
VPS52-215ENST00000464425 VIL1P09327 827 aaKnown RBP21.25■□□□□ 0.99
VPS52-215ENST00000464425 MS4A1P11836 297 aa21.25■□□□□ 0.99
VPS52-215ENST00000464425 CHADLQ6NUI6 762 aa21.25■□□□□ 0.99
VPS52-215ENST00000464425 LDHDQ86WU2 507 aa21.25■□□□□ 0.99
VPS52-215ENST00000464425 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.25■□□□□ 0.99
VPS52-215ENST00000464425 FBXW7Q969H0 707 aa21.25■□□□□ 0.99
VPS52-215ENST00000464425 SIL1Q9H173 461 aa21.25■□□□□ 0.99
VPS52-215ENST00000464425 CNOT7Q9UIV1 285 aaKnown RBP21.25■□□□□ 0.99
VPS52-215ENST00000464425 USP17L3A6NCW0 530 aa21.24■□□□□ 0.99
VPS52-215ENST00000464425 USP17L4A6NCW7 530 aa21.24■□□□□ 0.99
VPS52-215ENST00000464425 EYA2O00167 538 aa21.24■□□□□ 0.99
VPS52-215ENST00000464425 USP17L1Q7RTZ2 530 aa21.24■□□□□ 0.99
VPS52-215ENST00000464425 MICALL2Q8IY33 904 aa21.24■□□□□ 0.99
VPS52-215ENST00000464425 PA2G4Q9UQ80 394 aaKnown RBP21.24■□□□□ 0.99
VPS52-215ENST00000464425 SCN9AQ15858 1988 aa21.24■□□□□ 0.99
VPS52-215ENST00000464425 IRS2Q9Y4H2 1338 aa21.24■□□□□ 0.99
VPS52-215ENST00000464425 H7C1D1 291 aa21.23■□□□□ 0.99
VPS52-215ENST00000464425 SRGAP3O43295 1099 aa21.23■□□□□ 0.99
VPS52-215ENST00000464425 HSPA6P17066 643 aa21.23■□□□□ 0.99
VPS52-215ENST00000464425 UBE4AQ14139 1066 aa21.23■□□□□ 0.99
VPS52-215ENST00000464425 C15orf52Q6ZUT6 534 aaKnown RBP21.23■□□□□ 0.99
VPS52-215ENST00000464425 DPF2Q92785 391 aa21.23■□□□□ 0.99
VPS52-215ENST00000464425 CD209Q9NNX6 404 aa21.23■□□□□ 0.99
VPS52-215ENST00000464425 ADARB2Q9NS39 739 aaKnown RBP21.23■□□□□ 0.99
VPS52-215ENST00000464425 ZBTB7BO15156 539 aaPredicted RBP21.22■□□□□ 0.99
VPS52-215ENST00000464425 RPS12P25398 132 aaKnown RBP21.22■□□□□ 0.99
VPS52-215ENST00000464425 RSBN1LQ6PCB5 846 aaPredicted RBP21.22■□□□□ 0.99
VPS52-215ENST00000464425 USP50Q70EL3 339 aaPredicted RBP21.22■□□□□ 0.99
VPS52-215ENST00000464425 MXD3Q9BW11 206 aa21.22■□□□□ 0.99
VPS52-215ENST00000464425 C1orf115Q9H7X2 142 aa21.22■□□□□ 0.99
VPS52-215ENST00000464425 PDE8BO95263 885 aa21.21■□□□□ 0.99
VPS52-215ENST00000464425 ATG9AQ7Z3C6 839 aa21.21■□□□□ 0.99
VPS52-215ENST00000464425 ZNF804AQ7Z570 1209 aa21.21■□□□□ 0.99
VPS52-215ENST00000464425 VGLL2Q8N8G2 317 aa21.21■□□□□ 0.99
VPS52-215ENST00000464425 GYG1P46976 350 aa21.2■□□□□ 0.98
VPS52-215ENST00000464425 GTF2IP78347 998 aa21.2■□□□□ 0.98
VPS52-215ENST00000464425 MTX1Q13505 466 aa21.2■□□□□ 0.98
VPS52-215ENST00000464425 PDE3AQ14432 1141 aa21.2■□□□□ 0.98
VPS52-215ENST00000464425 RBM26Q5T8P6 1007 aaKnown RBP21.2■□□□□ 0.98
VPS52-215ENST00000464425 MAP1SQ66K74 1059 aaPredicted RBP21.2■□□□□ 0.98
VPS52-215ENST00000464425 TTLL5Q6EMB2 1281 aa21.2■□□□□ 0.98
VPS52-215ENST00000464425 SAMD7Q7Z3H4 446 aa21.2■□□□□ 0.98
VPS52-215ENST00000464425 COPRSQ9NQ92 184 aa21.2■□□□□ 0.98
VPS52-215ENST00000464425 A0A1B0GUL6 1792 aa21.19■□□□□ 0.98
VPS52-215ENST00000464425 DACT2Q5SW24 774 aa21.19■□□□□ 0.98
VPS52-215ENST00000464425 STRIP1Q5VSL9 837 aa21.19■□□□□ 0.98
VPS52-215ENST00000464425 AGBL3Q8NEM8 1001 aa21.19■□□□□ 0.98
VPS52-215ENST00000464425 TRPM4Q8TD43 1214 aa21.19■□□□□ 0.98
VPS52-215ENST00000464425 PNMA6EA0A0J9YXQ4 647 aa21.18■□□□□ 0.98
VPS52-215ENST00000464425 CIAO1O76071 339 aa21.18■□□□□ 0.98
VPS52-215ENST00000464425 HIBADHP31937 336 aaKnown RBP21.18■□□□□ 0.98
VPS52-215ENST00000464425 HIRAP54198 1017 aaPredicted RBP21.18■□□□□ 0.98
VPS52-215ENST00000464425 TBC1D10BQ4KMP7 808 aaPredicted RBP21.18■□□□□ 0.98
VPS52-215ENST00000464425 FAM84BQ96KN1 310 aaPredicted RBP21.18■□□□□ 0.98
VPS52-215ENST00000464425 FBXO3Q9UK99 471 aa21.18■□□□□ 0.98
VPS52-215ENST00000464425 COG6Q9Y2V7 657 aa21.18■□□□□ 0.98
VPS52-215ENST00000464425 EGFRP00533 1210 aa21.17■□□□□ 0.98
VPS52-215ENST00000464425 IL1R1P14778 569 aa21.17■□□□□ 0.98
VPS52-215ENST00000464425 IL15P40933 162 aaPredicted RBP21.17■□□□□ 0.98
VPS52-215ENST00000464425 RRP1P56182 461 aaKnown RBP21.17■□□□□ 0.98
VPS52-215ENST00000464425 PUM3Q15397 648 aaKnown RBP21.17■□□□□ 0.98
VPS52-215ENST00000464425 CNTROBQ8N137 903 aa21.17■□□□□ 0.98
VPS52-215ENST00000464425 GMLQ99445 158 aa21.17■□□□□ 0.98
VPS52-215ENST00000464425 CEP126Q9P2H0 1117 aa21.17■□□□□ 0.98
VPS52-215ENST00000464425 JAG2Q9Y219 1238 aa21.17■□□□□ 0.98
VPS52-215ENST00000464425 USP17L8P0C7I0 530 aa21.16■□□□□ 0.98
VPS52-215ENST00000464425 C20orf194Q5TEA3 1177 aa21.16■□□□□ 0.98
VPS52-215ENST00000464425 VPS37DQ86XT2 251 aa21.16■□□□□ 0.98
VPS52-215ENST00000464425 ITGBL1O95965 494 aaPredicted RBP21.15■□□□□ 0.98
VPS52-215ENST00000464425 IFIT1P09914 478 aaKnown RBP21.15■□□□□ 0.98
VPS52-215ENST00000464425 FGFR2P21802 821 aa21.15■□□□□ 0.98
VPS52-215ENST00000464425 APLP1P51693 650 aa21.15■□□□□ 0.98
VPS52-215ENST00000464425 HTRA3P83110 453 aa21.15■□□□□ 0.98
VPS52-215ENST00000464425 ATP8B2P98198 1209 aa21.15■□□□□ 0.98
VPS52-215ENST00000464425 MVPQ14764 893 aaKnown RBP21.15■□□□□ 0.98
VPS52-215ENST00000464425 FBXO33Q7Z6M2 555 aa21.15■□□□□ 0.98
VPS52-215ENST00000464425 SLC5A1P13866 664 aa21.14■□□□□ 0.97
VPS52-215ENST00000464425 BCAMP50895 628 aa21.14■□□□□ 0.97
VPS52-215ENST00000464425 ZNF280AP59817 542 aaPredicted RBP21.14■□□□□ 0.97
VPS52-215ENST00000464425 CAVIN4Q5BKX8 364 aa21.14■□□□□ 0.97
VPS52-215ENST00000464425 TDRD7Q8NHU6 1098 aaKnown RBP21.14■□□□□ 0.97
VPS52-215ENST00000464425 LPIN2Q92539 896 aa21.14■□□□□ 0.97
VPS52-215ENST00000464425 IQSEC3Q9UPP2 1182 aaPredicted RBP21.14■□□□□ 0.97
VPS52-215ENST00000464425 ADAMTSL1Q8N6G6 1762 aa21.13■□□□□ 0.97
VPS52-215ENST00000464425 SASH1O94885 1247 aa21.13■□□□□ 0.97
VPS52-215ENST00000464425 CENPBP07199 599 aaPredicted RBP21.13■□□□□ 0.97
VPS52-215ENST00000464425 KIF4BQ2VIQ3 1234 aa21.13■□□□□ 0.97
VPS52-215ENST00000464425 KIAA0825Q8IV33 1275 aa21.13■□□□□ 0.97
VPS52-215ENST00000464425 SUPT16HQ9Y5B9 1047 aaKnown RBP21.13■□□□□ 0.97
VPS52-215ENST00000464425 MYO3BQ8WXR4 1341 aa21.12■□□□□ 0.97
VPS52-215ENST00000464425 G3BP1Q13283 466 aaKnown RBP eCLIP21.12■□□□□ 0.97
VPS52-215ENST00000464425 POLA2Q14181 598 aa21.12■□□□□ 0.97
VPS52-215ENST00000464425 ATP2B3Q16720 1220 aa21.12■□□□□ 0.97
VPS52-215ENST00000464425 CERS5Q8N5B7 392 aa21.12■□□□□ 0.97
VPS52-215ENST00000464425 DDX19BQ9UMR2 479 aa21.12■□□□□ 0.97
VPS52-215ENST00000464425 PSME4Q14997 1843 aa21.11■□□□□ 0.97
VPS52-215ENST00000464425 PASKQ96RG2 1323 aa21.11■□□□□ 0.97
VPS52-215ENST00000464425 FRAT2O75474 233 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms