RNA–Protein interactions for RNA: ENST00000464423.1

UFM1-204, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 3

Gene UFM1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-204ENST00000464423 SRGAP3O43295 1099 aa21.99■■□□□ 1.11
UFM1-204ENST00000464423 EAPPQ56P03 285 aaPredicted RBP21.99■■□□□ 1.11
UFM1-204ENST00000464423 VGLL2Q8N8G2 317 aa21.99■■□□□ 1.11
UFM1-204ENST00000464423 RBM46Q8TBY0 533 aaKnown RBP21.99■■□□□ 1.11
UFM1-204ENST00000464423 GPRC5DQ9NZD1 345 aa21.99■■□□□ 1.11
UFM1-204ENST00000464423 COG6Q9Y2V7 657 aa21.99■■□□□ 1.11
UFM1-204ENST00000464423 SCN9AQ15858 1988 aa21.99■■□□□ 1.11
UFM1-204ENST00000464423 PNMA6EA0A0J9YXQ4 647 aa21.98■■□□□ 1.11
UFM1-204ENST00000464423 LMOD1P29536 600 aaPredicted RBP21.98■■□□□ 1.11
UFM1-204ENST00000464423 MTX1Q13505 466 aa21.98■■□□□ 1.11
UFM1-204ENST00000464423 MXD3Q9BW11 206 aa21.98■■□□□ 1.11
UFM1-204ENST00000464423 COA1Q9GZY4 146 aa21.98■■□□□ 1.11
UFM1-204ENST00000464423 VIL1P09327 827 aaKnown RBP21.97■■□□□ 1.11
UFM1-204ENST00000464423 C15orf52Q6ZUT6 534 aaKnown RBP21.97■■□□□ 1.11
UFM1-204ENST00000464423 PODNQ7Z5L7 613 aa21.97■■□□□ 1.11
UFM1-204ENST00000464423 SCN4AP35499 1836 aa21.96■■□□□ 1.11
UFM1-204ENST00000464423 PDE8BO95263 885 aa21.96■■□□□ 1.11
UFM1-204ENST00000464423 MVPQ14764 893 aaKnown RBP21.96■■□□□ 1.11
UFM1-204ENST00000464423 CD209Q9NNX6 404 aa21.96■■□□□ 1.11
UFM1-204ENST00000464423 COPRSQ9NQ92 184 aa21.96■■□□□ 1.11
UFM1-204ENST00000464423 USP17L3A6NCW0 530 aa21.95■■□□□ 1.1
UFM1-204ENST00000464423 USP17L4A6NCW7 530 aa21.95■■□□□ 1.1
UFM1-204ENST00000464423 MS4A1P11836 297 aa21.95■■□□□ 1.1
UFM1-204ENST00000464423 GYG1P46976 350 aa21.95■■□□□ 1.1
UFM1-204ENST00000464423 UBE4AQ14139 1066 aa21.95■■□□□ 1.1
UFM1-204ENST00000464423 USP17L1Q7RTZ2 530 aa21.95■■□□□ 1.1
UFM1-204ENST00000464423 FBXW7Q969H0 707 aa21.95■■□□□ 1.1
UFM1-204ENST00000464423 CNOT7Q9UIV1 285 aaKnown RBP21.95■■□□□ 1.1
UFM1-204ENST00000464423 CIAO1O76071 339 aa21.94■■□□□ 1.1
UFM1-204ENST00000464423 RSBN1LQ6PCB5 846 aaPredicted RBP21.94■■□□□ 1.1
UFM1-204ENST00000464423 MICALL2Q8IY33 904 aa21.94■■□□□ 1.1
UFM1-204ENST00000464423 SMC1BQ8NDV3 1235 aa21.94■■□□□ 1.1
UFM1-204ENST00000464423 DACT2Q5SW24 774 aa21.93■■□□□ 1.1
UFM1-204ENST00000464423 TRPM4Q8TD43 1214 aa21.93■■□□□ 1.1
UFM1-204ENST00000464423 EGFRP00533 1210 aa21.92■■□□□ 1.1
UFM1-204ENST00000464423 FGFR2P21802 821 aa21.92■■□□□ 1.1
UFM1-204ENST00000464423 GTF2IP78347 998 aa21.92■■□□□ 1.1
UFM1-204ENST00000464423 ATP8B2P98198 1209 aa21.92■■□□□ 1.1
UFM1-204ENST00000464423 FSTL1Q12841 308 aa21.92■■□□□ 1.1
UFM1-204ENST00000464423 CHADLQ6NUI6 762 aa21.92■■□□□ 1.1
UFM1-204ENST00000464423 ZNF804AQ7Z570 1209 aa21.92■■□□□ 1.1
UFM1-204ENST00000464423 PNMA8AQ86V59 439 aaPredicted RBP21.92■■□□□ 1.1
UFM1-204ENST00000464423 LDHDQ86WU2 507 aa21.92■■□□□ 1.1
UFM1-204ENST00000464423 DPF2Q92785 391 aa21.92■■□□□ 1.1
UFM1-204ENST00000464423 FAM84BQ96KN1 310 aaPredicted RBP21.92■■□□□ 1.1
UFM1-204ENST00000464423 GMLQ99445 158 aa21.92■■□□□ 1.1
UFM1-204ENST00000464423 ADARB2Q9NS39 739 aaKnown RBP21.92■■□□□ 1.1
UFM1-204ENST00000464423 JAG2Q9Y219 1238 aa21.92■■□□□ 1.1
UFM1-204ENST00000464423 CLEC11AQ9Y240 323 aa21.92■■□□□ 1.1
UFM1-204ENST00000464423 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.92■■□□□ 1.1
UFM1-204ENST00000464423 IL1R1P14778 569 aa21.91■■□□□ 1.1
UFM1-204ENST00000464423 RPS12P25398 132 aaKnown RBP21.91■■□□□ 1.1
UFM1-204ENST00000464423 IL15P40933 162 aaPredicted RBP21.91■■□□□ 1.1
UFM1-204ENST00000464423 HIRAP54198 1017 aaPredicted RBP21.91■■□□□ 1.1
UFM1-204ENST00000464423 POLA2Q14181 598 aa21.91■■□□□ 1.1
UFM1-204ENST00000464423 PUM3Q15397 648 aaKnown RBP21.91■■□□□ 1.1
UFM1-204ENST00000464423 SAMD7Q7Z3H4 446 aa21.91■■□□□ 1.1
UFM1-204ENST00000464423 FBXO3Q9UK99 471 aa21.91■■□□□ 1.1
UFM1-204ENST00000464423 ADAMTSL1Q8N6G6 1762 aa21.9■■□□□ 1.1
UFM1-204ENST00000464423 H7C1D1 291 aa21.9■■□□□ 1.1
UFM1-204ENST00000464423 HIBADHP31937 336 aaKnown RBP21.9■■□□□ 1.1
UFM1-204ENST00000464423 PDE3AQ14432 1141 aa21.9■■□□□ 1.1
UFM1-204ENST00000464423 TBC1D10BQ4KMP7 808 aaPredicted RBP21.9■■□□□ 1.1
UFM1-204ENST00000464423 STRIP1Q5VSL9 837 aa21.9■■□□□ 1.1
UFM1-204ENST00000464423 MAP1SQ66K74 1059 aaPredicted RBP21.9■■□□□ 1.1
UFM1-204ENST00000464423 TTLL5Q6EMB2 1281 aa21.9■■□□□ 1.1
UFM1-204ENST00000464423 USP50Q70EL3 339 aaPredicted RBP21.9■■□□□ 1.1
UFM1-204ENST00000464423 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.9■■□□□ 1.1
UFM1-204ENST00000464423 CEP126Q9P2H0 1117 aa21.9■■□□□ 1.1
UFM1-204ENST00000464423 IQSEC3Q9UPP2 1182 aaPredicted RBP21.9■■□□□ 1.1
UFM1-204ENST00000464423 BCAMP50895 628 aa21.89■■□□□ 1.09
UFM1-204ENST00000464423 RBM26Q5T8P6 1007 aaKnown RBP21.89■■□□□ 1.09
UFM1-204ENST00000464423 CEP85Q6P2H3 762 aa21.89■■□□□ 1.09
UFM1-204ENST00000464423 FBXO33Q7Z6M2 555 aa21.89■■□□□ 1.09
UFM1-204ENST00000464423 SSH3Q8TE77 659 aa21.89■■□□□ 1.09
UFM1-204ENST00000464423 DDX19BQ9UMR2 479 aa21.89■■□□□ 1.09
UFM1-204ENST00000464423 ZNF646O15015 1829 aaPredicted RBP21.89■■□□□ 1.09
UFM1-204ENST00000464423 TFCP2Q12800 502 aa21.88■■□□□ 1.09
UFM1-204ENST00000464423 CERS5Q8N5B7 392 aa21.88■■□□□ 1.09
UFM1-204ENST00000464423 AGBL3Q8NEM8 1001 aa21.88■■□□□ 1.09
UFM1-204ENST00000464423 TDRD7Q8NHU6 1098 aaKnown RBP21.88■■□□□ 1.09
UFM1-204ENST00000464423 ZBTB40Q9NUA8 1239 aa21.88■■□□□ 1.09
UFM1-204ENST00000464423 PSME4Q14997 1843 aa21.87■■□□□ 1.09
UFM1-204ENST00000464423 IFIT1P09914 478 aaKnown RBP21.87■■□□□ 1.09
UFM1-204ENST00000464423 HSPA6P17066 643 aa21.87■■□□□ 1.09
UFM1-204ENST00000464423 ATP2B3Q16720 1220 aa21.87■■□□□ 1.09
UFM1-204ENST00000464423 LPIN2Q92539 896 aa21.87■■□□□ 1.09
UFM1-204ENST00000464423 SLC5A1P13866 664 aa21.86■■□□□ 1.09
UFM1-204ENST00000464423 RRP1P56182 461 aaKnown RBP21.86■■□□□ 1.09
UFM1-204ENST00000464423 ZNF609O15014 1411 aa21.86■■□□□ 1.09
UFM1-204ENST00000464423 USP17L8P0C7I0 530 aa21.85■■□□□ 1.09
UFM1-204ENST00000464423 ADORA1P30542 326 aa21.85■■□□□ 1.09
UFM1-204ENST00000464423 ZNF280AP59817 542 aaPredicted RBP21.85■■□□□ 1.09
UFM1-204ENST00000464423 TIMM10P62072 90 aa21.85■■□□□ 1.09
UFM1-204ENST00000464423 HTRA3P83110 453 aa21.85■■□□□ 1.09
UFM1-204ENST00000464423 CAVIN4Q5BKX8 364 aa21.85■■□□□ 1.09
UFM1-204ENST00000464423 VPS37DQ86XT2 251 aa21.85■■□□□ 1.09
UFM1-204ENST00000464423 KIAA0825Q8IV33 1275 aa21.85■■□□□ 1.09
UFM1-204ENST00000464423 CNTROBQ8N137 903 aa21.85■■□□□ 1.09
UFM1-204ENST00000464423 ASTN2O75129 1339 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms