RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 NPHP3Q7Z494 1330 aa8.5□□□□□ -1.05
CLSTN1-204ENST00000464286 DIP2CQ9Y2E4 1556 aa8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 CFAP99D6REC4 459 aa8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 J3QL48 77 aa8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 SMARCA5O60264 1052 aaPredicted RBP8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 CDK11BP21127 795 aaKnown RBP8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 SYT1P21579 422 aa8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 IDI1Q13907 227 aa8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 SAFB2Q14151 953 aaKnown RBP eCLIP8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 FOXD4L5Q5VV16 416 aaPredicted RBP8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 MYSM1Q5VVJ2 828 aa8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 KRT222Q8N1A0 295 aa8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 FOXD4L4Q8WXT5 416 aaPredicted RBP8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 KIF1BPQ96EK5 621 aa8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 THUMPD2Q9BTF0 503 aaKnown RBP8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 CALCOCO1Q9P1Z2 691 aa8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 DACH1Q9UI36 760 aa8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 CYP46A1Q9Y6A2 500 aa8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 C3P01024 1663 aa8.49□□□□□ -1.05
CLSTN1-204ENST00000464286 MAP3K5Q99683 1374 aa8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 TCHHQ07283 1943 aa8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 GOLGA6L19H0YKK7 550 aa8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 APBB1O00213 710 aa8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 GADD45BO75293 160 aaPredicted RBP8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 GLRX3O76003 335 aaKnown RBP8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 TPM1P09493 284 aa8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 SMCPP49901 116 aaPredicted RBP8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 GSDMDP57764 484 aa8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 KCNH2Q12809 1159 aa8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 PRPF38BQ5VTL8 546 aaKnown RBP8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 ERC1Q8IUD2 1116 aa8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 OTUD7AQ8TE49 926 aaPredicted RBP8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 NAT10Q9H0A0 1025 aaKnown RBP8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 UNC93B1Q9H1C4 597 aa8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 TNMDQ9H2S6 317 aa8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 ZBTB3Q9H5J0 574 aa8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 PRDM10Q9NQV6 1147 aa8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 LIMD1Q9UGP4 676 aa8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 ZHX1Q9UKY1 873 aaPredicted RBP8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 CNPY2Q9Y2B0 182 aa8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 MORC2Q9Y6X9 1032 aaPredicted RBP8.48□□□□□ -1.05
CLSTN1-204ENST00000464286 WASLO00401 505 aaPredicted RBP8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 SGSM2O43147 1006 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 FIBPO43427 364 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 UBTFL1P0CB47 393 aaPredicted RBP8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 TNNT1P13805 278 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 TPM4P67936 248 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 SH3BP2P78314 561 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 TPD52L1Q16890 204 aaPredicted RBP8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 TEX35Q5T0J7 233 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 ATL3Q6DD88 541 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 SARM1Q6SZW1 724 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 SLC4A10Q6U841 1118 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 LYPD8Q6UX82 237 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 TDRD7Q8NHU6 1098 aaKnown RBP8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 CABLES1Q8TDN4 633 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 ERO1AQ96HE7 468 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 ALDH8A1Q9H2A2 487 aaPredicted RBP8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 KCND1Q9NSA2 647 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 PDRG1Q9NUG6 133 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 ARGLU1Q9NWB6 273 aaPredicted RBP8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 TSPYL4Q9UJ04 414 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 DDX41Q9UJV9 622 aaKnown RBP8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 CFAP45Q9UL16 551 aa8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 USP42Q9H9J4 1324 aaKnown RBP8.47□□□□□ -1.05
CLSTN1-204ENST00000464286 FAM208AQ9UK61 1670 aaKnown RBP8.46□□□□□ -1.05
CLSTN1-204ENST00000464286 RGPD1P0DJD0 1748 aa8.46□□□□□ -1.05
CLSTN1-204ENST00000464286 XRN1Q8IZH2 1706 aaKnown RBP8.46□□□□□ -1.05
CLSTN1-204ENST00000464286 AXIN1O15169 862 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 SIAH2O43255 324 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 GIGYF1O75420 1035 aaPredicted RBP8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 TYRO3Q06418 890 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 KRT32Q14532 448 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 CTC1Q2NKJ3 1217 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 TUSC1Q2TAM9 212 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 KIF18AQ8NI77 898 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 KCNB2Q92953 911 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 MRFAP1L1Q96HT8 127 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 TTC14Q96N46 770 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 TRIM5Q9C035 493 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 HMG20BQ9P0W2 317 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 SNX14Q9Y5W7 946 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 EMILIN1Q9Y6C2 1016 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 NALCNQ8IZF0 1738 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 CRYBG1Q9Y4K1 1723 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 CRB1P82279 1406 aa8.46□□□□□ -1.06
CLSTN1-204ENST00000464286 A2ML1A8K2U0 1454 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 GJB2P29033 226 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 ZNF75DP51815 510 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 AK2P54819 239 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 SLC20A2Q08357 652 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 BMS1Q14692 1282 aaKnown RBP8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 PTPN14Q15678 1187 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 ATP2B3Q16720 1220 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 CEP135Q66GS9 1140 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 SULT6B1Q6IMI4 303 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 RBM43Q6ZSC3 357 aaKnown RBP8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 SSH3Q8TE77 659 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 BAP1Q92560 729 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms