RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 DACT2Q5SW24 774 aa22.25■■□□□ 1.15
HMGN1-209ENST00000463631 CTU1Q7Z7A3 348 aaKnown RBP22.25■■□□□ 1.15
HMGN1-209ENST00000463631 MINPP1Q9UNW1 487 aa22.25■■□□□ 1.15
HMGN1-209ENST00000463631 PI4KAP2A4QPH2 592 aa22.24■■□□□ 1.15
HMGN1-209ENST00000463631 MMP14P50281 582 aa22.24■■□□□ 1.15
HMGN1-209ENST00000463631 PI4KAP1Q8N8J0 262 aa22.24■■□□□ 1.15
HMGN1-209ENST00000463631 GREM2Q9H772 168 aa22.24■■□□□ 1.15
HMGN1-209ENST00000463631 WTIPA6NIX2 430 aaPredicted RBP22.23■■□□□ 1.15
HMGN1-209ENST00000463631 CCT4P50991 539 aaKnown RBP22.23■■□□□ 1.15
HMGN1-209ENST00000463631 NEXNQ0ZGT2 675 aa22.23■■□□□ 1.15
HMGN1-209ENST00000463631 NBPF9Q3BBW0 867 aa22.23■■□□□ 1.15
HMGN1-209ENST00000463631 STRIP1Q5VSL9 837 aa22.23■■□□□ 1.15
HMGN1-209ENST00000463631 TSPYL6Q8N831 410 aa22.23■■□□□ 1.15
HMGN1-209ENST00000463631 OGFOD1Q8N543 542 aa22.22■■□□□ 1.15
HMGN1-209ENST00000463631 COA1Q9GZY4 146 aa22.22■■□□□ 1.15
HMGN1-209ENST00000463631 NEURL1BA8MQ27 555 aa22.21■■□□□ 1.15
HMGN1-209ENST00000463631 WNT10BO00744 389 aa22.21■■□□□ 1.15
HMGN1-209ENST00000463631 STK31Q9BXU1 1019 aa22.21■■□□□ 1.15
HMGN1-209ENST00000463631 LEMD3Q9Y2U8 911 aa22.21■■□□□ 1.15
HMGN1-209ENST00000463631 CWF19L2Q2TBE0 894 aaKnown RBP22.2■■□□□ 1.14
HMGN1-209ENST00000463631 NOM1Q5C9Z4 860 aaKnown RBP22.2■■□□□ 1.14
HMGN1-209ENST00000463631 MOB2Q70IA6 237 aa22.2■■□□□ 1.14
HMGN1-209ENST00000463631 PLA2G12BQ9BX93 195 aa22.2■■□□□ 1.14
HMGN1-209ENST00000463631 H7C1W4 665 aa22.19■■□□□ 1.14
HMGN1-209ENST00000463631 SOX10P56693 466 aa22.19■■□□□ 1.14
HMGN1-209ENST00000463631 COL1A1P02452 1464 aaPredicted RBP22.18■■□□□ 1.14
HMGN1-209ENST00000463631 UBE2Q2LH0YL09 131 aa22.18■■□□□ 1.14
HMGN1-209ENST00000463631 NF2P35240 595 aa22.18■■□□□ 1.14
HMGN1-209ENST00000463631 PKN2Q16513 984 aaKnown RBP22.18■■□□□ 1.14
HMGN1-209ENST00000463631 CCDC27Q2M243 656 aa22.18■■□□□ 1.14
HMGN1-209ENST00000463631 UBE3BQ7Z3V4 1068 aa22.18■■□□□ 1.14
HMGN1-209ENST00000463631 MXD3Q9BW11 206 aa22.18■■□□□ 1.14
HMGN1-209ENST00000463631 SCAF8Q9UPN6 1271 aaKnown RBP22.18■■□□□ 1.14
HMGN1-209ENST00000463631 IGHMBP2P38935 993 aaKnown RBP22.17■■□□□ 1.14
HMGN1-209ENST00000463631 TM4SF4P48230 202 aa22.17■■□□□ 1.14
HMGN1-209ENST00000463631 TXNRD3Q86VQ6 643 aa22.17■■□□□ 1.14
HMGN1-209ENST00000463631 TSR2Q969E8 191 aaKnown RBP22.17■■□□□ 1.14
HMGN1-209ENST00000463631 ANKRD2Q9GZV1 360 aa22.17■■□□□ 1.14
HMGN1-209ENST00000463631 CACNA1FO60840 1977 aa22.17■■□□□ 1.14
HMGN1-209ENST00000463631 LAMB1P07942 1786 aa22.17■■□□□ 1.14
HMGN1-209ENST00000463631 ZNF804BA4D1E1 1349 aa22.16■■□□□ 1.14
HMGN1-209ENST00000463631 PRAMEF18Q5VWM3 479 aa22.16■■□□□ 1.14
HMGN1-209ENST00000463631 APOBEC3FQ8IUX4 373 aaKnown RBP22.16■■□□□ 1.14
HMGN1-209ENST00000463631 ZBED3Q96IU2 234 aaPredicted RBP22.16■■□□□ 1.14
HMGN1-209ENST00000463631 CFHR5Q9BXR6 569 aa22.16■■□□□ 1.14
HMGN1-209ENST00000463631 A0A1B0GUL6 1792 aa22.16■■□□□ 1.14
HMGN1-209ENST00000463631 SASH1O94885 1247 aa22.15■■□□□ 1.14
HMGN1-209ENST00000463631 CASP7P55210 303 aa22.15■■□□□ 1.14
HMGN1-209ENST00000463631 GCKRQ14397 625 aa22.15■■□□□ 1.14
HMGN1-209ENST00000463631 ZNF296Q8WUU4 475 aaPredicted RBP22.15■■□□□ 1.14
HMGN1-209ENST00000463631 HPS5Q9UPZ3 1129 aa22.15■■□□□ 1.14
HMGN1-209ENST00000463631 ECM29Q5VYK3 1845 aa22.15■■□□□ 1.14
HMGN1-209ENST00000463631 ITGA6P23229 1130 aa22.14■■□□□ 1.13
HMGN1-209ENST00000463631 SREBF2Q12772 1141 aa22.14■■□□□ 1.13
HMGN1-209ENST00000463631 TTLL12Q14166 644 aaPredicted RBP22.14■■□□□ 1.13
HMGN1-209ENST00000463631 TWISTNBQ3B726 338 aaPredicted RBP22.14■■□□□ 1.13
HMGN1-209ENST00000463631 G2E3Q7L622 706 aa22.14■■□□□ 1.13
HMGN1-209ENST00000463631 FBXW7Q969H0 707 aa22.14■■□□□ 1.13
HMGN1-209ENST00000463631 CSF1RP07333 972 aa22.13■■□□□ 1.13
HMGN1-209ENST00000463631 KLRK1P26718 216 aa22.13■■□□□ 1.13
HMGN1-209ENST00000463631 TTLL5Q6EMB2 1281 aa22.13■■□□□ 1.13
HMGN1-209ENST00000463631 HDAC9Q9UKV0 1011 aa22.13■■□□□ 1.13
HMGN1-209ENST00000463631 IL16Q14005 1332 aa22.12■■□□□ 1.13
HMGN1-209ENST00000463631 TBC1D8O95759 1140 aa22.12■■□□□ 1.13
HMGN1-209ENST00000463631 SLC4A2P04920 1241 aa22.12■■□□□ 1.13
HMGN1-209ENST00000463631 LDLRAD1Q5T700 205 aa22.12■■□□□ 1.13
HMGN1-209ENST00000463631 KIAA0825Q8IV33 1275 aa22.12■■□□□ 1.13
HMGN1-209ENST00000463631 MPHOSPH8Q99549 860 aa22.12■■□□□ 1.13
HMGN1-209ENST00000463631 MYH16Q9H6N6 1097 aa22.12■■□□□ 1.13
HMGN1-209ENST00000463631 IRS2Q9Y4H2 1338 aa22.11■■□□□ 1.13
HMGN1-209ENST00000463631 GPR25O00155 361 aa22.11■■□□□ 1.13
HMGN1-209ENST00000463631 PTPN12Q05209 780 aaKnown RBP22.11■■□□□ 1.13
HMGN1-209ENST00000463631 FLIIQ13045 1269 aa22.11■■□□□ 1.13
HMGN1-209ENST00000463631 NCBP3Q53F19 620 aaKnown RBP22.11■■□□□ 1.13
HMGN1-209ENST00000463631 ARMC9Q7Z3E5 817 aa22.11■■□□□ 1.13
HMGN1-209ENST00000463631 WWC1Q8IX03 1113 aa22.11■■□□□ 1.13
HMGN1-209ENST00000463631 LINS1Q8NG48 757 aa22.11■■□□□ 1.13
HMGN1-209ENST00000463631 PCDH10Q9P2E7 1040 aa22.11■■□□□ 1.13
HMGN1-209ENST00000463631 GTF2IP78347 998 aa22.1■■□□□ 1.13
HMGN1-209ENST00000463631 C15orf52Q6ZUT6 534 aaKnown RBP22.1■■□□□ 1.13
HMGN1-209ENST00000463631 MTMR14Q8NCE2 650 aa22.1■■□□□ 1.13
HMGN1-209ENST00000463631 SSC5DA1L4H1 1573 aa22.09■■□□□ 1.13
HMGN1-209ENST00000463631 CHRNDQ07001 517 aa22.09■■□□□ 1.13
HMGN1-209ENST00000463631 PRPF38BQ5VTL8 546 aaKnown RBP22.09■■□□□ 1.13
HMGN1-209ENST00000463631 DNAAF4Q8WXU2 420 aa22.09■■□□□ 1.13
HMGN1-209ENST00000463631 HTTP42858 3142 aa22.09■■□□□ 1.13
HMGN1-209ENST00000463631 KCNJ4P48050 445 aa22.08■■□□□ 1.13
HMGN1-209ENST00000463631 MAP3K11Q16584 847 aa22.08■■□□□ 1.13
HMGN1-209ENST00000463631 SPRYD7Q5W111 196 aa22.08■■□□□ 1.13
HMGN1-209ENST00000463631 FBXO46Q6PJ61 603 aaPredicted RBP22.08■■□□□ 1.13
HMGN1-209ENST00000463631 CD209Q9NNX6 404 aa22.08■■□□□ 1.13
HMGN1-209ENST00000463631 ALDH1A1P00352 501 aa22.07■■□□□ 1.12
HMGN1-209ENST00000463631 FKBP5Q13451 457 aaPredicted RBP22.07■■□□□ 1.12
HMGN1-209ENST00000463631 CERS5Q8N5B7 392 aa22.07■■□□□ 1.12
HMGN1-209ENST00000463631 DEFB129Q9H1M3 183 aa22.07■■□□□ 1.12
HMGN1-209ENST00000463631 PPP2R3BQ9Y5P8 575 aa22.07■■□□□ 1.12
HMGN1-209ENST00000463631 UNCXA6NJT0 531 aa22.06■■□□□ 1.12
HMGN1-209ENST00000463631 FKTNO75072 461 aa22.06■■□□□ 1.12
HMGN1-209ENST00000463631 MKRN3Q13064 507 aaKnown RBP22.06■■□□□ 1.12
HMGN1-209ENST00000463631 ANGEL1Q9UNK9 670 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms