RNA–Protein interactions for RNA: ENST00000462927.5

CYTH4-208, Transcript of cytohesin 4, human

TSL 2

Gene CYTH4, Length 3,667 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYTH4-208	ENST00000462927	ZDHHC9	Q9Y397	364 aa		11.68	□□□□□ -0.54
CYTH4-208	ENST00000462927	MMP10	P09238	476 aa		11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	MX1	P20591	662 aa		11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	FOSB	P53539	338 aa		11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	DDX46	Q7L014	1031 aa	Known RBP	11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	RPGR	Q92834	1020 aa	Known RBP	11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	PUS3	Q9BZE2	481 aa	Known RBP	11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	EYA2	O00167	538 aa		11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	FGD1	P98174	961 aa		11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	HELB	Q8NG08	1087 aa	Predicted RBP	11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	COPRS	Q9NQ92	184 aa		11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	LY75	O60449	1722 aa		11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	ERC2	O15083	957 aa		11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	MCC	P23508	829 aa		11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	HMGN5	P82970	282 aa	Known RBP	11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	AKT1S1	Q96B36	256 aa		11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	ZNF830	Q96NB3	372 aa	Predicted RBP	11.67	□□□□□ -0.54
CYTH4-208	ENST00000462927	IL15	P40933	162 aa	Predicted RBP	11.66	□□□□□ -0.54
CYTH4-208	ENST00000462927	ANKRD18A	Q8IVF6	992 aa		11.66	□□□□□ -0.54
CYTH4-208	ENST00000462927	MYRIP	Q8NFW9	859 aa		11.66	□□□□□ -0.54
CYTH4-208	ENST00000462927	TSC1	Q92574	1164 aa		11.66	□□□□□ -0.54
CYTH4-208	ENST00000462927	COL5A3	P25940	1745 aa	Predicted RBP	11.66	□□□□□ -0.54
CYTH4-208	ENST00000462927	CCDC125	Q86Z20	511 aa		11.66	□□□□□ -0.54
CYTH4-208	ENST00000462927	CBX1	P83916	185 aa		11.66	□□□□□ -0.54
CYTH4-208	ENST00000462927	TMX3	Q96JJ7	454 aa		11.65	□□□□□ -0.54
CYTH4-208	ENST00000462927	PLA2G12B	Q9BX93	195 aa		11.65	□□□□□ -0.54
CYTH4-208	ENST00000462927	TAF1L	Q8IZX4	1826 aa		11.65	□□□□□ -0.54
CYTH4-208	ENST00000462927	PNPLA7	Q6ZV29	1317 aa		11.65	□□□□□ -0.54
CYTH4-208	ENST00000462927	NUP188	Q5SRE5	1749 aa		11.65	□□□□□ -0.54
CYTH4-208	ENST00000462927	SASH1	O94885	1247 aa		11.65	□□□□□ -0.54
CYTH4-208	ENST00000462927	PDE1A	P54750	535 aa		11.65	□□□□□ -0.54
CYTH4-208	ENST00000462927	PRR5L	Q6MZQ0	368 aa		11.65	□□□□□ -0.54
CYTH4-208	ENST00000462927	TIMM10	P62072	90 aa		11.64	□□□□□ -0.55
CYTH4-208	ENST00000462927	PRIMPOL	Q96LW4	560 aa		11.64	□□□□□ -0.55
CYTH4-208	ENST00000462927	USP25	Q9UHP3	1055 aa		11.64	□□□□□ -0.55
CYTH4-208	ENST00000462927	CSF1R	P07333	972 aa		11.64	□□□□□ -0.55
CYTH4-208	ENST00000462927	RFX5	P48382	616 aa	Predicted RBP	11.64	□□□□□ -0.55
CYTH4-208	ENST00000462927	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
CYTH4-208	ENST00000462927	TMX4	Q9H1E5	349 aa	Predicted RBP	11.64	□□□□□ -0.55
CYTH4-208	ENST00000462927	ABCC12	Q96J65	1359 aa		11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	PPFIA3	O75145	1194 aa		11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	TAF5L	O75529	589 aa		11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	MCM2	P49736	904 aa		11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	EAF2	Q96CJ1	260 aa	Predicted RBP	11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	KIF3A	Q9Y496	699 aa		11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	ZBTB7A	O95365	584 aa		11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	CHAF1A	Q13111	956 aa	Predicted RBP	11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	TNNI3K	Q59H18	835 aa		11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	C3orf67	Q6ZVT6	689 aa		11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	DNAJC2	Q99543	621 aa	Known RBP	11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	BOLA2	Q9H3K6	86 aa		11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	TTC12	Q9H892	705 aa	Predicted RBP	11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	AKAP2	Q9Y2D5	859 aa		11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	FPGT-TNNI3K	V9GXZ4	949 aa		11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	DDR1	Q08345	913 aa		11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	R3HDM1	Q15032	1099 aa	Known RBP	11.63	□□□□□ -0.55
CYTH4-208	ENST00000462927	PSD	A5PKW4	1024 aa	Predicted RBP	11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	DMTN	Q08495	405 aa		11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	ATP2B3	Q16720	1220 aa		11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	PPP4R3B	Q5MIZ7	849 aa		11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927		A0A1B0GUL7	405 aa		11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	RGL2	O15211	777 aa		11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	RPS8	P62241	208 aa	Known RBP	11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	CCDC158	Q5M9N0	1113 aa		11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	VPS37D	Q86XT2	251 aa		11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	FAM184A	Q8NB25	1140 aa		11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	PIBF1	Q8WXW3	757 aa		11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	DBNDD2	Q9BQY9	259 aa		11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	ECHDC1	Q9NTX5	307 aa		11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	ANKIB1	Q9P2G1	1089 aa		11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	WWC3	Q9ULE0	1092 aa		11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	BRD1	O95696	1058 aa		11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	CWC27	Q6UX04	472 aa	Known RBP	11.62	□□□□□ -0.55
CYTH4-208	ENST00000462927	ADCY5	O95622	1261 aa		11.61	□□□□□ -0.55
CYTH4-208	ENST00000462927	TTC39A	Q5SRH9	613 aa		11.61	□□□□□ -0.55
CYTH4-208	ENST00000462927	CELF1	Q92879	486 aa	Known RBP	11.61	□□□□□ -0.55
CYTH4-208	ENST00000462927	TLR7	Q9NYK1	1049 aa	Known RBP	11.61	□□□□□ -0.55
CYTH4-208	ENST00000462927	ZNF831	Q5JPB2	1677 aa		11.61	□□□□□ -0.55
CYTH4-208	ENST00000462927	VPS37C	A5D8V6	355 aa	Predicted RBP	11.61	□□□□□ -0.55
CYTH4-208	ENST00000462927	POLRMT	O00411	1230 aa	Known RBP	11.61	□□□□□ -0.55
CYTH4-208	ENST00000462927	ANKRD36C	Q5JPF3	1778 aa		11.61	□□□□□ -0.55
CYTH4-208	ENST00000462927	GLRX3	O76003	335 aa	Known RBP	11.61	□□□□□ -0.55
CYTH4-208	ENST00000462927	ATG9A	Q7Z3C6	839 aa		11.61	□□□□□ -0.55
CYTH4-208	ENST00000462927	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
CYTH4-208	ENST00000462927	GADD45B	O75293	160 aa	Predicted RBP	11.6	□□□□□ -0.55
CYTH4-208	ENST00000462927	IFIT1	P09914	478 aa	Known RBP	11.6	□□□□□ -0.55
CYTH4-208	ENST00000462927	TM4SF1	P30408	202 aa		11.6	□□□□□ -0.55
CYTH4-208	ENST00000462927	UVSSA	Q2YD98	709 aa		11.6	□□□□□ -0.55
CYTH4-208	ENST00000462927	UTP14C	Q5TAP6	766 aa	Known RBP	11.6	□□□□□ -0.55
CYTH4-208	ENST00000462927	SNAP23	O00161	211 aa		11.6	□□□□□ -0.55
CYTH4-208	ENST00000462927	KDM4A	O75164	1064 aa		11.6	□□□□□ -0.55
CYTH4-208	ENST00000462927	CIAO1	O76071	339 aa		11.6	□□□□□ -0.55
CYTH4-208	ENST00000462927	SF3B3	Q15393	1217 aa	Known RBP	11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms