RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 ZNF280AP59817 542 aaPredicted RBP10.21□□□□□ -0.77
SMC3-202ENST00000462899 FKBP1BP68106 108 aa10.21□□□□□ -0.77
SMC3-202ENST00000462899 WASHC4Q2M389 1173 aa10.21□□□□□ -0.77
SMC3-202ENST00000462899 CELF1Q92879 486 aaKnown RBP10.21□□□□□ -0.77
SMC3-202ENST00000462899 CFHR5Q9BXR6 569 aa10.21□□□□□ -0.77
SMC3-202ENST00000462899 SH3TC1Q8TE82 1336 aa10.21□□□□□ -0.78
SMC3-202ENST00000462899 SPEF2Q9C093 1822 aa10.21□□□□□ -0.78
SMC3-202ENST00000462899 MYH3P11055 1940 aa10.21□□□□□ -0.78
SMC3-202ENST00000462899 SEC24BO95487 1268 aa10.2□□□□□ -0.78
SMC3-202ENST00000462899 TCIRG1Q13488 830 aa10.2□□□□□ -0.78
SMC3-202ENST00000462899 SF3B3Q15393 1217 aaKnown RBP10.2□□□□□ -0.78
SMC3-202ENST00000462899 HABP4Q5JVS0 413 aaKnown RBP10.2□□□□□ -0.78
SMC3-202ENST00000462899 GCC1Q96CN9 775 aa10.2□□□□□ -0.78
SMC3-202ENST00000462899 GMLQ99445 158 aa10.2□□□□□ -0.78
SMC3-202ENST00000462899 PITPNM2Q9BZ72 1349 aa10.2□□□□□ -0.78
SMC3-202ENST00000462899 LAMA3Q16787 3333 aa10.2□□□□□ -0.78
SMC3-202ENST00000462899 A0A0C4DFX4 3053 aa10.2□□□□□ -0.78
SMC3-202ENST00000462899 TRIOBPQ9H2D6 2365 aa10.19□□□□□ -0.78
SMC3-202ENST00000462899 TM4SF4P48230 202 aa10.19□□□□□ -0.78
SMC3-202ENST00000462899 GPSM2P81274 684 aa10.19□□□□□ -0.78
SMC3-202ENST00000462899 NFE2L2Q16236 605 aa10.19□□□□□ -0.78
SMC3-202ENST00000462899 HSP90AB3PQ58FF7 597 aa10.19□□□□□ -0.78
SMC3-202ENST00000462899 IER5LQ5T953 404 aa10.19□□□□□ -0.78
SMC3-202ENST00000462899 FBXO46Q6PJ61 603 aaPredicted RBP10.19□□□□□ -0.78
SMC3-202ENST00000462899 SULF1Q8IWU6 871 aa10.19□□□□□ -0.78
SMC3-202ENST00000462899 PODXL2Q9NZ53 605 aa10.19□□□□□ -0.78
SMC3-202ENST00000462899 TRMT112Q9UI30 125 aaKnown RBP10.19□□□□□ -0.78
SMC3-202ENST00000462899 GPR25O00155 361 aa10.18□□□□□ -0.78
SMC3-202ENST00000462899 TBC1D8O95759 1140 aa10.18□□□□□ -0.78
SMC3-202ENST00000462899 PLCG2P16885 1265 aa10.18□□□□□ -0.78
SMC3-202ENST00000462899 IRX5P78411 483 aaPredicted RBP10.18□□□□□ -0.78
SMC3-202ENST00000462899 CNGB1Q14028 1251 aaPredicted RBP10.18□□□□□ -0.78
SMC3-202ENST00000462899 RBM26Q5T8P6 1007 aaKnown RBP10.18□□□□□ -0.78
SMC3-202ENST00000462899 ANGEL2Q5VTE6 544 aaKnown RBP10.18□□□□□ -0.78
SMC3-202ENST00000462899 MOB2Q70IA6 237 aa10.18□□□□□ -0.78
SMC3-202ENST00000462899 COPS6Q7L5N1 327 aa10.18□□□□□ -0.78
SMC3-202ENST00000462899 TBC1D16Q8TBP0 767 aa10.18□□□□□ -0.78
SMC3-202ENST00000462899 NSFL1CQ9UNZ2 370 aaKnown RBP10.18□□□□□ -0.78
SMC3-202ENST00000462899 OTOFQ9HC10 1997 aa10.17□□□□□ -0.78
SMC3-202ENST00000462899 RIMBP2O15034 1052 aa10.17□□□□□ -0.78
SMC3-202ENST00000462899 FXR1P51114 621 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMC3-202ENST00000462899 SCARF1Q14162 830 aa10.17□□□□□ -0.78
SMC3-202ENST00000462899 DOK7Q18PE1 504 aa10.17□□□□□ -0.78
SMC3-202ENST00000462899 AGBL3Q8NEM8 1001 aa10.17□□□□□ -0.78
SMC3-202ENST00000462899 XAGE3Q8WTP9 111 aa10.17□□□□□ -0.78
SMC3-202ENST00000462899 ISCA1Q9BUE6 129 aa10.17□□□□□ -0.78
SMC3-202ENST00000462899 PCGF6Q9BYE7 350 aa10.17□□□□□ -0.78
SMC3-202ENST00000462899 R3HDMLQ9H3Y0 253 aa10.17□□□□□ -0.78
SMC3-202ENST00000462899 A0A1B0GUL6 1792 aa10.16□□□□□ -0.78
SMC3-202ENST00000462899 RSBN1LQ6PCB5 846 aaPredicted RBP10.16□□□□□ -0.78
SMC3-202ENST00000462899 NECTIN2Q92692 538 aa10.16□□□□□ -0.78
SMC3-202ENST00000462899 EYA3Q99504 573 aa10.16□□□□□ -0.78
SMC3-202ENST00000462899 BABAM1Q9NWV8 329 aa10.16□□□□□ -0.78
SMC3-202ENST00000462899 TSPYL4Q9UJ04 414 aa10.16□□□□□ -0.78
SMC3-202ENST00000462899 C6orf229H3BNL8 230 aa10.15□□□□□ -0.78
SMC3-202ENST00000462899 POTEB2H3BUK9 544 aa10.15□□□□□ -0.78
SMC3-202ENST00000462899 EIF2S2P20042 333 aaKnown RBP10.15□□□□□ -0.78
SMC3-202ENST00000462899 MFRPQ9BY79 579 aa10.15□□□□□ -0.78
SMC3-202ENST00000462899 MYOZ2Q9NPC6 264 aa10.15□□□□□ -0.78
SMC3-202ENST00000462899 HDAC9Q9UKV0 1011 aa10.15□□□□□ -0.78
SMC3-202ENST00000462899 UBE2Q2LH0YL09 131 aa10.14□□□□□ -0.79
SMC3-202ENST00000462899 PDCD7Q8N8D1 485 aaKnown RBP10.14□□□□□ -0.79
SMC3-202ENST00000462899 FAM89AQ96GI7 184 aa10.14□□□□□ -0.79
SMC3-202ENST00000462899 OCEL1Q9H607 264 aa10.14□□□□□ -0.79
SMC3-202ENST00000462899 SCAF8Q9UPN6 1271 aaKnown RBP10.14□□□□□ -0.79
SMC3-202ENST00000462899 SSC5DA1L4H1 1573 aa10.14□□□□□ -0.79
SMC3-202ENST00000462899 CUL9Q8IWT3 2517 aa10.13□□□□□ -0.79
SMC3-202ENST00000462899 FKTNO75072 461 aa10.13□□□□□ -0.79
SMC3-202ENST00000462899 RPS8P62241 208 aaKnown RBP10.13□□□□□ -0.79
SMC3-202ENST00000462899 AIMP1Q12904 312 aaKnown RBP10.13□□□□□ -0.79
SMC3-202ENST00000462899 TRIM28Q13263 835 aaKnown RBP10.13□□□□□ -0.79
SMC3-202ENST00000462899 PLBD2Q8NHP8 589 aa10.13□□□□□ -0.79
SMC3-202ENST00000462899 ZNF428Q96B54 188 aa10.13□□□□□ -0.79
SMC3-202ENST00000462899 COL1A1P02452 1464 aaPredicted RBP10.12□□□□□ -0.79
SMC3-202ENST00000462899 UFL1O94874 794 aa10.12□□□□□ -0.79
SMC3-202ENST00000462899 USP17L8P0C7I0 530 aa10.12□□□□□ -0.79
SMC3-202ENST00000462899 SREBF2Q12772 1141 aa10.12□□□□□ -0.79
SMC3-202ENST00000462899 KRT24Q2M2I5 525 aa10.12□□□□□ -0.79
SMC3-202ENST00000462899 NBPF9Q3BBW0 867 aa10.12□□□□□ -0.79
SMC3-202ENST00000462899 LDLRAD1Q5T700 205 aa10.12□□□□□ -0.79
SMC3-202ENST00000462899 PRAMEF18Q5VWM3 479 aa10.12□□□□□ -0.79
SMC3-202ENST00000462899 OTOP1Q7RTM1 612 aa10.12□□□□□ -0.79
SMC3-202ENST00000462899 MS4A4AQ96JQ5 239 aa10.12□□□□□ -0.79
SMC3-202ENST00000462899 ZC3H12CQ9C0D7 883 aaKnown RBP10.12□□□□□ -0.79
SMC3-202ENST00000462899 SEC31BQ9NQW1 1179 aa10.12□□□□□ -0.79
SMC3-202ENST00000462899 CHPF2Q9P2E5 772 aa10.12□□□□□ -0.79
SMC3-202ENST00000462899 ZSWIM8A7E2V4 1837 aa10.12□□□□□ -0.79
SMC3-202ENST00000462899 WNT10BO00744 389 aa10.11□□□□□ -0.79
SMC3-202ENST00000462899 IRS4O14654 1257 aaPredicted RBP10.11□□□□□ -0.79
SMC3-202ENST00000462899 CAP1Q01518 475 aa10.11□□□□□ -0.79
SMC3-202ENST00000462899 PTPN12Q05209 780 aaKnown RBP10.11□□□□□ -0.79
SMC3-202ENST00000462899 INTS3Q68E01 1043 aaKnown RBP10.11□□□□□ -0.79
SMC3-202ENST00000462899 ARMC5Q96C12 935 aa10.11□□□□□ -0.79
SMC3-202ENST00000462899 ZBED3Q96IU2 234 aaPredicted RBP10.11□□□□□ -0.79
SMC3-202ENST00000462899 GGA1Q9UJY5 639 aa10.11□□□□□ -0.79
SMC3-202ENST00000462899 MED23Q9ULK4 1368 aa10.11□□□□□ -0.79
SMC3-202ENST00000462899 UNC80Q8N2C7 3258 aa10.1□□□□□ -0.79
SMC3-202ENST00000462899 USP17L3A6NCW0 530 aa10.1□□□□□ -0.79
SMC3-202ENST00000462899 USP17L4A6NCW7 530 aa10.1□□□□□ -0.79
SMC3-202ENST00000462899 ATP5J2-PTCD1G3V325 749 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms