RNA–Protein interactions for RNA: ENST00000462777.1

HLA-F-222, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 779 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-222ENST00000462777 UBE3BQ7Z3V4 1068 aa25.49■■□□□ 1.67
HLA-F-222ENST00000462777 WWC1Q8IX03 1113 aa25.49■■□□□ 1.67
HLA-F-222ENST00000462777 FBXW7Q969H0 707 aa25.49■■□□□ 1.67
HLA-F-222ENST00000462777 MYO3BQ8WXR4 1341 aa25.48■■□□□ 1.67
HLA-F-222ENST00000462777 H7C1W4 665 aa25.48■■□□□ 1.67
HLA-F-222ENST00000462777 TRPA1O75762 1119 aa25.48■■□□□ 1.67
HLA-F-222ENST00000462777 RGS19P49795 217 aa25.48■■□□□ 1.67
HLA-F-222ENST00000462777 COA1Q9GZY4 146 aa25.48■■□□□ 1.67
HLA-F-222ENST00000462777 RNF186Q9NXI6 227 aa25.48■■□□□ 1.67
HLA-F-222ENST00000462777 LEMD3Q9Y2U8 911 aa25.48■■□□□ 1.67
HLA-F-222ENST00000462777 MMP14P50281 582 aa25.47■■□□□ 1.67
HLA-F-222ENST00000462777 MPHOSPH8Q99549 860 aa25.47■■□□□ 1.67
HLA-F-222ENST00000462777 ANKRD2Q9GZV1 360 aa25.47■■□□□ 1.67
HLA-F-222ENST00000462777 MYH16Q9H6N6 1097 aa25.47■■□□□ 1.67
HLA-F-222ENST00000462777 IL16Q14005 1332 aa25.46■■□□□ 1.67
HLA-F-222ENST00000462777 STRIP1Q5VSL9 837 aa25.46■■□□□ 1.67
HLA-F-222ENST00000462777 CSRNP1Q96S65 589 aa25.46■■□□□ 1.67
HLA-F-222ENST00000462777 G2E3Q7L622 706 aa25.45■■□□□ 1.66
HLA-F-222ENST00000462777 PLA2G12BQ9BX93 195 aa25.45■■□□□ 1.66
HLA-F-222ENST00000462777 SCN9AQ15858 1988 aa25.45■■□□□ 1.66
HLA-F-222ENST00000462777 ITGA6P23229 1130 aa25.44■■□□□ 1.66
HLA-F-222ENST00000462777 NF2P35240 595 aa25.44■■□□□ 1.66
HLA-F-222ENST00000462777 FLIIQ13045 1269 aa25.44■■□□□ 1.66
HLA-F-222ENST00000462777 FKBP5Q13451 457 aaPredicted RBP25.44■■□□□ 1.66
HLA-F-222ENST00000462777 GCKRQ14397 625 aa25.44■■□□□ 1.66
HLA-F-222ENST00000462777 DACT2Q5SW24 774 aa25.44■■□□□ 1.66
HLA-F-222ENST00000462777 WTIPA6NIX2 430 aaPredicted RBP25.43■■□□□ 1.66
HLA-F-222ENST00000462777 KCNJ4P48050 445 aa25.43■■□□□ 1.66
HLA-F-222ENST00000462777 TTLL12Q14166 644 aaPredicted RBP25.43■■□□□ 1.66
HLA-F-222ENST00000462777 NBPF9Q3BBW0 867 aa25.43■■□□□ 1.66
HLA-F-222ENST00000462777 NCBP3Q53F19 620 aaKnown RBP25.43■■□□□ 1.66
HLA-F-222ENST00000462777 RASAL3Q86YV0 1011 aa25.43■■□□□ 1.66
HLA-F-222ENST00000462777 HDAC9Q9UKV0 1011 aa25.43■■□□□ 1.66
HLA-F-222ENST00000462777 ZNF804BA4D1E1 1349 aa25.42■■□□□ 1.66
HLA-F-222ENST00000462777 POLR2AP24928 1970 aaKnown RBP25.42■■□□□ 1.66
HLA-F-222ENST00000462777 TTLL5Q6EMB2 1281 aa25.42■■□□□ 1.66
HLA-F-222ENST00000462777 DNAAF4Q8WXU2 420 aa25.42■■□□□ 1.66
HLA-F-222ENST00000462777 LINS1Q8NG48 757 aa25.41■■□□□ 1.66
HLA-F-222ENST00000462777 MXD3Q9BW11 206 aa25.41■■□□□ 1.66
HLA-F-222ENST00000462777 CASP8AP2Q9UKL3 1982 aa25.41■■□□□ 1.66
HLA-F-222ENST00000462777 WNT10BO00744 389 aa25.4■■□□□ 1.66
HLA-F-222ENST00000462777 CCDC184Q52MB2 194 aa25.4■■□□□ 1.66
HLA-F-222ENST00000462777 UBE2Q2LH0YL09 131 aa25.39■■□□□ 1.66
HLA-F-222ENST00000462777 CSF1RP07333 972 aa25.39■■□□□ 1.66
HLA-F-222ENST00000462777 TXNRD3Q86VQ6 643 aa25.39■■□□□ 1.66
HLA-F-222ENST00000462777 SCAF8Q9UPN6 1271 aaKnown RBP25.39■■□□□ 1.66
HLA-F-222ENST00000462777 ANKRD18BA2A2Z9 1011 aa25.38■■□□□ 1.65
HLA-F-222ENST00000462777 PRAMEF18Q5VWM3 479 aa25.38■■□□□ 1.65
HLA-F-222ENST00000462777 MOB2Q70IA6 237 aa25.37■■□□□ 1.65
HLA-F-222ENST00000462777 APOBEC3FQ8IUX4 373 aaKnown RBP25.37■■□□□ 1.65
HLA-F-222ENST00000462777 CASP7P55210 303 aa25.36■■□□□ 1.65
HLA-F-222ENST00000462777 GTF2IP78347 998 aa25.36■■□□□ 1.65
HLA-F-222ENST00000462777 CHRNDQ07001 517 aa25.36■■□□□ 1.65
HLA-F-222ENST00000462777 ARMC9Q7Z3E5 817 aa25.36■■□□□ 1.65
HLA-F-222ENST00000462777 KIAA0825Q8IV33 1275 aa25.36■■□□□ 1.65
HLA-F-222ENST00000462777 MRS2Q9HD23 443 aa25.36■■□□□ 1.65
HLA-F-222ENST00000462777 FANCIQ9NVI1 1328 aa25.36■■□□□ 1.65
HLA-F-222ENST00000462777 SASH1O94885 1247 aa25.35■■□□□ 1.65
HLA-F-222ENST00000462777 IFIT5Q13325 482 aaKnown RBP25.35■■□□□ 1.65
HLA-F-222ENST00000462777 CTU1Q7Z7A3 348 aaKnown RBP25.35■■□□□ 1.65
HLA-F-222ENST00000462777 WDR63Q8IWG1 891 aa25.35■■□□□ 1.65
HLA-F-222ENST00000462777 PAPPA2Q9BXP8 1791 aa25.35■■□□□ 1.65
HLA-F-222ENST00000462777 VAMP4O75379 141 aa25.34■■□□□ 1.65
HLA-F-222ENST00000462777 CD209Q9NNX6 404 aa25.34■■□□□ 1.65
HLA-F-222ENST00000462777 CHMP3Q9Y3E7 222 aa25.34■■□□□ 1.65
HLA-F-222ENST00000462777 KLRK1P26718 216 aa25.33■■□□□ 1.65
HLA-F-222ENST00000462777 SALL2Q9Y467 1007 aaPredicted RBP25.33■■□□□ 1.65
HLA-F-222ENST00000462777 PSME4Q14997 1843 aa25.32■■□□□ 1.64
HLA-F-222ENST00000462777 EXOSC9Q06265 439 aaKnown RBP25.31■■□□□ 1.64
HLA-F-222ENST00000462777 SREBF2Q12772 1141 aa25.31■■□□□ 1.64
HLA-F-222ENST00000462777 DLGAP5Q15398 846 aa25.31■■□□□ 1.64
HLA-F-222ENST00000462777 ANP32CO43423 234 aa25.3■■□□□ 1.64
HLA-F-222ENST00000462777 TM4SF4P48230 202 aa25.3■■□□□ 1.64
HLA-F-222ENST00000462777 PKN2Q16513 984 aaKnown RBP25.3■■□□□ 1.64
HLA-F-222ENST00000462777 ZNF804AQ7Z570 1209 aa25.3■■□□□ 1.64
HLA-F-222ENST00000462777 MYH3P11055 1940 aa25.29■■□□□ 1.64
HLA-F-222ENST00000462777 TAF5LO75529 589 aa25.29■■□□□ 1.64
HLA-F-222ENST00000462777 PRKG1Q13976 671 aa25.29■■□□□ 1.64
HLA-F-222ENST00000462777 TAF7LQ5H9L4 462 aa25.29■■□□□ 1.64
HLA-F-222ENST00000462777 C15orf52Q6ZUT6 534 aaKnown RBP25.29■■□□□ 1.64
HLA-F-222ENST00000462777 MYO1BO43795 1136 aa25.28■■□□□ 1.64
HLA-F-222ENST00000462777 TBC1D8O95759 1140 aa25.28■■□□□ 1.64
HLA-F-222ENST00000462777 PTPN12Q05209 780 aaKnown RBP25.28■■□□□ 1.64
HLA-F-222ENST00000462777 MKRN3Q13064 507 aaKnown RBP25.28■■□□□ 1.64
HLA-F-222ENST00000462777 CCDC57Q2TAC2 916 aa25.28■■□□□ 1.64
HLA-F-222ENST00000462777 HELBQ8NG08 1087 aaPredicted RBP25.28■■□□□ 1.64
HLA-F-222ENST00000462777 ZBED3Q96IU2 234 aaPredicted RBP25.28■■□□□ 1.64
HLA-F-222ENST00000462777 F6X3S4 739 aa25.27■■□□□ 1.64
HLA-F-222ENST00000462777 FOXO4P98177 505 aa25.27■■□□□ 1.64
HLA-F-222ENST00000462777 BEND3Q5T5X7 828 aa25.27■■□□□ 1.64
HLA-F-222ENST00000462777 DEFB129Q9H1M3 183 aa25.27■■□□□ 1.64
HLA-F-222ENST00000462777 ANGEL1Q9UNK9 670 aaKnown RBP25.27■■□□□ 1.64
HLA-F-222ENST00000462777 AKAP11Q9UKA4 1901 aa25.27■■□□□ 1.64
HLA-F-222ENST00000462777 SOX10P56693 466 aa25.26■■□□□ 1.63
HLA-F-222ENST00000462777 LMBR1LQ6UX01 489 aa25.26■■□□□ 1.63
HLA-F-222ENST00000462777 MTMR14Q8NCE2 650 aa25.26■■□□□ 1.63
HLA-F-222ENST00000462777 ZNF296Q8WUU4 475 aaPredicted RBP25.26■■□□□ 1.63
HLA-F-222ENST00000462777 C9orf78Q9NZ63 289 aaPredicted RBP25.26■■□□□ 1.63
HLA-F-222ENST00000462777 PPP1R12BO60237 982 aaPredicted RBP25.25■■□□□ 1.63
HLA-F-222ENST00000462777 IL1R1P14778 569 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms