RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.03□□□□□ -0.32
RTF1-202ENST00000462276 ZNF609O15014 1411 aa13.03□□□□□ -0.32
RTF1-202ENST00000462276 TNRC6CQ9HCJ0 1690 aaKnown RBP13.02□□□□□ -0.32
RTF1-202ENST00000462276 UFL1O94874 794 aa13.02□□□□□ -0.33
RTF1-202ENST00000462276 HIBADHP31937 336 aaKnown RBP13.02□□□□□ -0.33
RTF1-202ENST00000462276 TTC22Q5TAA0 569 aa13.02□□□□□ -0.33
RTF1-202ENST00000462276 FBXO33Q7Z6M2 555 aa13.02□□□□□ -0.33
RTF1-202ENST00000462276 VPS37DQ86XT2 251 aa13.02□□□□□ -0.33
RTF1-202ENST00000462276 OTUD7AQ8TE49 926 aaPredicted RBP13.02□□□□□ -0.33
RTF1-202ENST00000462276 PSMD1Q99460 953 aa13.02□□□□□ -0.33
RTF1-202ENST00000462276 ZC3H12CQ9C0D7 883 aaKnown RBP13.02□□□□□ -0.33
RTF1-202ENST00000462276 UTRNP46939 3433 aa13.01□□□□□ -0.33
RTF1-202ENST00000462276 C6orf229H3BNL8 230 aa13.01□□□□□ -0.33
RTF1-202ENST00000462276 EIF5BO60841 1220 aaKnown RBP13.01□□□□□ -0.33
RTF1-202ENST00000462276 TTC39AQ5SRH9 613 aa13.01□□□□□ -0.33
RTF1-202ENST00000462276 CCDC102BQ68D86 513 aa13.01□□□□□ -0.33
RTF1-202ENST00000462276 ZNF804AQ7Z570 1209 aa13.01□□□□□ -0.33
RTF1-202ENST00000462276 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
RTF1-202ENST00000462276 PI4K2BQ8TCG2 481 aa13.01□□□□□ -0.33
RTF1-202ENST00000462276 FAM84BQ96KN1 310 aaPredicted RBP13.01□□□□□ -0.33
RTF1-202ENST00000462276 FHDC1Q9C0D6 1143 aaPredicted RBP13.01□□□□□ -0.33
RTF1-202ENST00000462276 BCL11AQ9H165 835 aa13.01□□□□□ -0.33
RTF1-202ENST00000462276 MED23Q9ULK4 1368 aa13□□□□□ -0.33
RTF1-202ENST00000462276 PDS5AQ29RF7 1337 aaKnown RBP13□□□□□ -0.33
RTF1-202ENST00000462276 C21orf2O43822 256 aa13□□□□□ -0.33
RTF1-202ENST00000462276 ARID4AP29374 1257 aaPredicted RBP13□□□□□ -0.33
RTF1-202ENST00000462276 ADORA1P30542 326 aa13□□□□□ -0.33
RTF1-202ENST00000462276 WASHC4Q2M389 1173 aa13□□□□□ -0.33
RTF1-202ENST00000462276 LRRFIP1Q32MZ4 808 aaKnown RBP13□□□□□ -0.33
RTF1-202ENST00000462276 TMED8Q6PL24 325 aaPredicted RBP13□□□□□ -0.33
RTF1-202ENST00000462276 HAUS7Q99871 368 aa13□□□□□ -0.33
RTF1-202ENST00000462276 SYT17Q9BSW7 474 aa13□□□□□ -0.33
RTF1-202ENST00000462276 TLR7Q9NYK1 1049 aaKnown RBP13□□□□□ -0.33
RTF1-202ENST00000462276 POLLQ9UGP5 575 aa13□□□□□ -0.33
RTF1-202ENST00000462276 IRS2Q9Y4H2 1338 aa12.99□□□□□ -0.33
RTF1-202ENST00000462276 TTF1Q15361 905 aaPredicted RBP12.99□□□□□ -0.33
RTF1-202ENST00000462276 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
RTF1-202ENST00000462276 EVI5LQ96CN4 794 aa12.99□□□□□ -0.33
RTF1-202ENST00000462276 COA1Q9GZY4 146 aa12.99□□□□□ -0.33
RTF1-202ENST00000462276 DENND2AQ9ULE3 1009 aa12.99□□□□□ -0.33
RTF1-202ENST00000462276 ANKRD31Q8N7Z5 1873 aa12.99□□□□□ -0.33
RTF1-202ENST00000462276 SNAP23O00161 211 aa12.98□□□□□ -0.33
RTF1-202ENST00000462276 PHKA1P46020 1223 aa12.98□□□□□ -0.33
RTF1-202ENST00000462276 BCAMP50895 628 aa12.98□□□□□ -0.33
RTF1-202ENST00000462276 FKBP4Q02790 459 aaKnown RBP eCLIP12.98□□□□□ -0.33
RTF1-202ENST00000462276 PODNQ7Z5L7 613 aa12.98□□□□□ -0.33
RTF1-202ENST00000462276 BOLA2Q9H3K6 86 aa12.98□□□□□ -0.33
RTF1-202ENST00000462276 BCS1LQ9Y276 419 aa12.98□□□□□ -0.33
RTF1-202ENST00000462276 LTBP3Q9NS15 1303 aa12.97□□□□□ -0.33
RTF1-202ENST00000462276 G3V3G9 751 aa12.97□□□□□ -0.33
RTF1-202ENST00000462276 HIP1O00291 1037 aa12.97□□□□□ -0.33
RTF1-202ENST00000462276 FRAT2O75474 233 aaPredicted RBP12.97□□□□□ -0.33
RTF1-202ENST00000462276 IL1R1P14778 569 aa12.97□□□□□ -0.33
RTF1-202ENST00000462276 GYG1P46976 350 aa12.97□□□□□ -0.33
RTF1-202ENST00000462276 KIAA2012Q0VF49 1180 aa12.97□□□□□ -0.33
RTF1-202ENST00000462276 DCAF8Q5TAQ9 597 aa12.97□□□□□ -0.33
RTF1-202ENST00000462276 ZGPATQ8N5A5 531 aaKnown RBP12.97□□□□□ -0.33
RTF1-202ENST00000462276 SPATA5Q8NB90 893 aa12.97□□□□□ -0.33
RTF1-202ENST00000462276 NLGN2Q8NFZ4 835 aa12.97□□□□□ -0.33
RTF1-202ENST00000462276 TDRD7Q8NHU6 1098 aaKnown RBP12.97□□□□□ -0.33
RTF1-202ENST00000462276 KIF13BQ9NQT8 1826 aa12.97□□□□□ -0.33
RTF1-202ENST00000462276 GSPT1P15170 499 aaKnown RBP12.96□□□□□ -0.33
RTF1-202ENST00000462276 SDSP20132 328 aa12.96□□□□□ -0.33
RTF1-202ENST00000462276 CASC1Q6TDU7 716 aa12.96□□□□□ -0.33
RTF1-202ENST00000462276 SKAP1Q86WV1 359 aa12.96□□□□□ -0.33
RTF1-202ENST00000462276 WDR66Q8TBY9 1149 aa12.96□□□□□ -0.33
RTF1-202ENST00000462276 TAOK3Q9H2K8 898 aa12.96□□□□□ -0.33
RTF1-202ENST00000462276 CD209Q9NNX6 404 aa12.96□□□□□ -0.33
RTF1-202ENST00000462276 PAG1Q9NWQ8 432 aa12.96□□□□□ -0.33
RTF1-202ENST00000462276 TRIM6-TRIM34B2RNG4 842 aa12.95□□□□□ -0.34
RTF1-202ENST00000462276 MCAMP43121 646 aa12.95□□□□□ -0.34
RTF1-202ENST00000462276 RASGRF1Q13972 1273 aa12.95□□□□□ -0.34
RTF1-202ENST00000462276 TSHZ3Q63HK5 1081 aa12.95□□□□□ -0.34
RTF1-202ENST00000462276 ZSCAN25Q6NSZ9 544 aa12.95□□□□□ -0.34
RTF1-202ENST00000462276 OLFM4Q6UX06 510 aa12.95□□□□□ -0.34
RTF1-202ENST00000462276 TXNRD3Q86VQ6 643 aa12.95□□□□□ -0.34
RTF1-202ENST00000462276 KBTBD3Q8NAB2 608 aa12.95□□□□□ -0.34
RTF1-202ENST00000462276 TBC1D22AQ8WUA7 517 aa12.95□□□□□ -0.34
RTF1-202ENST00000462276 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.95□□□□□ -0.34
RTF1-202ENST00000462276 HMG20BQ9P0W2 317 aa12.95□□□□□ -0.34
RTF1-202ENST00000462276 ZNF219Q9P2Y4 722 aaPredicted RBP12.95□□□□□ -0.34
RTF1-202ENST00000462276 SNED1Q8TER0 1413 aa12.95□□□□□ -0.34
RTF1-202ENST00000462276 SALL1Q9NSC2 1324 aa12.94□□□□□ -0.34
RTF1-202ENST00000462276 COL4A1P02462 1669 aa12.94□□□□□ -0.34
RTF1-202ENST00000462276 WTIPA6NIX2 430 aaPredicted RBP12.94□□□□□ -0.34
RTF1-202ENST00000462276 ZFYP08048 801 aaPredicted RBP12.94□□□□□ -0.34
RTF1-202ENST00000462276 KLRK1P26718 216 aa12.94□□□□□ -0.34
RTF1-202ENST00000462276 SPTY2D1Q68D10 685 aaPredicted RBP12.94□□□□□ -0.34
RTF1-202ENST00000462276 RILPL2Q969X0 211 aa12.94□□□□□ -0.34
RTF1-202ENST00000462276 DNAJC2Q99543 621 aaKnown RBP12.94□□□□□ -0.34
RTF1-202ENST00000462276 SUGT1Q9Y2Z0 365 aa12.94□□□□□ -0.34
RTF1-202ENST00000462276 RFX7Q2KHR2 1363 aa12.94□□□□□ -0.34
RTF1-202ENST00000462276 FAM205AQ6ZU69 1335 aa12.93□□□□□ -0.34
RTF1-202ENST00000462276 GOLIM4O00461 696 aa12.93□□□□□ -0.34
RTF1-202ENST00000462276 PPIP5K2O43314 1243 aa12.93□□□□□ -0.34
RTF1-202ENST00000462276 CDC45O75419 566 aa12.93□□□□□ -0.34
RTF1-202ENST00000462276 YY1P25490 414 aa12.93□□□□□ -0.34
RTF1-202ENST00000462276 ZAP70P43403 619 aa12.93□□□□□ -0.34
RTF1-202ENST00000462276 FKBP1AP62942 108 aaKnown RBP12.93□□□□□ -0.34
RTF1-202ENST00000462276 MAP3K12Q12852 859 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms