RNA–Protein interactions for RNA: ENST00000461859.1

TUFT1-205, Transcript of tuftelin 1, humanhuman

TSL 2

Gene TUFT1, Length 749 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-205ENST00000461859 COL22A1Q8NFW1 1626 aaPredicted RBP9.42□□□□□ -0.9
TUFT1-205ENST00000461859 PRAG1Q86YV5 1406 aa9.42□□□□□ -0.9
TUFT1-205ENST00000461859 NPHP3Q7Z494 1330 aa9.42□□□□□ -0.9
TUFT1-205ENST00000461859 PHF20L1A8MW92 1017 aa9.42□□□□□ -0.9
TUFT1-205ENST00000461859 GDF11O95390 407 aa9.42□□□□□ -0.9
TUFT1-205ENST00000461859 ATP4AP20648 1035 aa9.42□□□□□ -0.9
TUFT1-205ENST00000461859 FGFR3P22607 806 aa9.42□□□□□ -0.9
TUFT1-205ENST00000461859 UBAP2LQ14157 1087 aaKnown RBP9.42□□□□□ -0.9
TUFT1-205ENST00000461859 SCHIP1Q9P0W5 487 aaPredicted RBP9.42□□□□□ -0.9
TUFT1-205ENST00000461859 USP21Q9UK80 565 aa9.42□□□□□ -0.9
TUFT1-205ENST00000461859 GNEQ9Y223 722 aaKnown RBP9.42□□□□□ -0.9
TUFT1-205ENST00000461859 PCDHGC4Q9Y5F7 938 aa9.42□□□□□ -0.9
TUFT1-205ENST00000461859 GJA3Q9Y6H8 435 aa9.42□□□□□ -0.9
TUFT1-205ENST00000461859 ANKRD30BQ9BXX2 1392 aa9.41□□□□□ -0.9
TUFT1-205ENST00000461859 ADGRF5Q8IZF2 1346 aa9.41□□□□□ -0.9
TUFT1-205ENST00000461859 ATG7O95352 703 aa9.41□□□□□ -0.9
TUFT1-205ENST00000461859 BMP4P12644 408 aa9.41□□□□□ -0.9
TUFT1-205ENST00000461859 XPCQ01831 940 aaPredicted RBP9.41□□□□□ -0.9
TUFT1-205ENST00000461859 GOLGA6L1Q8N7Z2 621 aa9.41□□□□□ -0.9
TUFT1-205ENST00000461859 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
TUFT1-205ENST00000461859 FMN2Q9NZ56 1722 aa9.41□□□□□ -0.9
TUFT1-205ENST00000461859 LRPPRCP42704 1394 aaKnown RBP9.4□□□□□ -0.9
TUFT1-205ENST00000461859 KIF1AQ12756 1690 aa9.4□□□□□ -0.9
TUFT1-205ENST00000461859 OIP5O43482 229 aa9.4□□□□□ -0.9
TUFT1-205ENST00000461859 FOXO3O43524 673 aa9.4□□□□□ -0.9
TUFT1-205ENST00000461859 CDK11BP21127 795 aaKnown RBP9.4□□□□□ -0.9
TUFT1-205ENST00000461859 IRS1P35568 1242 aa9.4□□□□□ -0.9
TUFT1-205ENST00000461859 LARGE2Q8N3Y3 721 aa9.4□□□□□ -0.9
TUFT1-205ENST00000461859 BEND7Q8N7W2 519 aaPredicted RBP9.4□□□□□ -0.9
TUFT1-205ENST00000461859 ABHD17AQ96GS6 310 aa9.4□□□□□ -0.9
TUFT1-205ENST00000461859 UCN2Q96RP3 112 aa9.4□□□□□ -0.9
TUFT1-205ENST00000461859 DNAAF2Q9NVR5 837 aaKnown RBP9.4□□□□□ -0.9
TUFT1-205ENST00000461859 TRPC5Q9UL62 973 aaPredicted RBP9.4□□□□□ -0.9
TUFT1-205ENST00000461859 RGPD8O14715 1765 aaPredicted RBP9.4□□□□□ -0.91
TUFT1-205ENST00000461859 ATAD2Q6PL18 1390 aa9.39□□□□□ -0.91
TUFT1-205ENST00000461859 A0A1W2PNR3 127 aa9.39□□□□□ -0.91
TUFT1-205ENST00000461859 RBM47A0AV96 593 aaKnown RBP9.39□□□□□ -0.91
TUFT1-205ENST00000461859 PALM3A6NDB9 673 aaPredicted RBP9.39□□□□□ -0.91
TUFT1-205ENST00000461859 TMEM88BA6NKF7 163 aa9.39□□□□□ -0.91
TUFT1-205ENST00000461859 ATXN7O15265 892 aaPredicted RBP9.39□□□□□ -0.91
TUFT1-205ENST00000461859 BNIP3LO60238 219 aa9.39□□□□□ -0.91
TUFT1-205ENST00000461859 TMEM132EQ6IEE7 984 aa9.39□□□□□ -0.91
TUFT1-205ENST00000461859 WAPLQ7Z5K2 1190 aa9.39□□□□□ -0.91
TUFT1-205ENST00000461859 ZNF295-AS1Q8N0V1 137 aa9.39□□□□□ -0.91
TUFT1-205ENST00000461859 TPCN2Q8NHX9 752 aa9.39□□□□□ -0.91
TUFT1-205ENST00000461859 KLRG1Q96E93 195 aa9.39□□□□□ -0.91
TUFT1-205ENST00000461859 MPHOSPH9Q99550 1183 aa9.39□□□□□ -0.91
TUFT1-205ENST00000461859 ZCCHC2Q9C0B9 1178 aaKnown RBP9.39□□□□□ -0.91
TUFT1-205ENST00000461859 NDFIP2Q9NV92 336 aa9.39□□□□□ -0.91
TUFT1-205ENST00000461859 CHMP3Q9Y3E7 222 aa9.39□□□□□ -0.91
TUFT1-205ENST00000461859 PXDNQ92626 1479 aa9.39□□□□□ -0.91
TUFT1-205ENST00000461859 SPATA31E1Q6ZUB1 1445 aa9.39□□□□□ -0.91
TUFT1-205ENST00000461859 CARNS1A5YM72 827 aa9.38□□□□□ -0.91
TUFT1-205ENST00000461859 LMOD1P29536 600 aaPredicted RBP9.38□□□□□ -0.91
TUFT1-205ENST00000461859 GSK3AP49840 483 aa9.38□□□□□ -0.91
TUFT1-205ENST00000461859 TEAD4Q15561 434 aa9.38□□□□□ -0.91
TUFT1-205ENST00000461859 CCDC102BQ68D86 513 aa9.38□□□□□ -0.91
TUFT1-205ENST00000461859 BICDL1Q6ZP65 573 aa9.38□□□□□ -0.91
TUFT1-205ENST00000461859 MKRN1Q9UHC7 482 aaKnown RBP9.38□□□□□ -0.91
TUFT1-205ENST00000461859 GPC6Q9Y625 555 aaPredicted RBP9.38□□□□□ -0.91
TUFT1-205ENST00000461859 MYOM2P54296 1465 aa9.38□□□□□ -0.91
TUFT1-205ENST00000461859 TECPR2O15040 1411 aa9.38□□□□□ -0.91
TUFT1-205ENST00000461859 YTHDC2Q9H6S0 1430 aaKnown RBP9.38□□□□□ -0.91
TUFT1-205ENST00000461859 M0R2N6 131 aa9.37□□□□□ -0.91
TUFT1-205ENST00000461859 SLC9A9Q8IVB4 645 aa9.37□□□□□ -0.91
TUFT1-205ENST00000461859 OGFOD1Q8N543 542 aa9.37□□□□□ -0.91
TUFT1-205ENST00000461859 PIK3C2GO75747 1445 aa9.37□□□□□ -0.91
TUFT1-205ENST00000461859 ATRNO75882 1429 aa9.37□□□□□ -0.91
TUFT1-205ENST00000461859 ABCC11Q96J66 1382 aa9.37□□□□□ -0.91
TUFT1-205ENST00000461859 PLEKHH1Q9ULM0 1364 aa9.37□□□□□ -0.91
TUFT1-205ENST00000461859 UNCXA6NJT0 531 aa9.36□□□□□ -0.91
TUFT1-205ENST00000461859 ERCC3P19447 782 aa9.36□□□□□ -0.91
TUFT1-205ENST00000461859 EPHA4P54764 986 aa9.36□□□□□ -0.91
TUFT1-205ENST00000461859 FOXK2Q01167 660 aa9.36□□□□□ -0.91
TUFT1-205ENST00000461859 L3MBTL2Q969R5 705 aa9.36□□□□□ -0.91
TUFT1-205ENST00000461859 IGSF5Q9NSI5 407 aa9.36□□□□□ -0.91
TUFT1-205ENST00000461859 ZNF232Q9UNY5 417 aa9.36□□□□□ -0.91
TUFT1-205ENST00000461859 USP3Q9Y6I4 520 aa9.36□□□□□ -0.91
TUFT1-205ENST00000461859 DNMT3AQ9Y6K1 912 aaPredicted RBP9.36□□□□□ -0.91
TUFT1-205ENST00000461859 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.36□□□□□ -0.91
TUFT1-205ENST00000461859 SERTM1A2A2V5 107 aa9.35□□□□□ -0.91
TUFT1-205ENST00000461859 NOS2P35228 1153 aa9.35□□□□□ -0.91
TUFT1-205ENST00000461859 CLDN10P78369 228 aa9.35□□□□□ -0.91
TUFT1-205ENST00000461859 SAFB2Q14151 953 aaKnown RBP eCLIP9.35□□□□□ -0.91
TUFT1-205ENST00000461859 FAM182BQ5T319 152 aa9.35□□□□□ -0.91
TUFT1-205ENST00000461859 SAMD5Q5TGI4 173 aa9.35□□□□□ -0.91
TUFT1-205ENST00000461859 SLCO4C1Q6ZQN7 724 aa9.35□□□□□ -0.91
TUFT1-205ENST00000461859 SIX5Q8N196 739 aa9.35□□□□□ -0.91
TUFT1-205ENST00000461859 GALNT6Q8NCL4 622 aa9.35□□□□□ -0.91
TUFT1-205ENST00000461859 ZIC5Q96T25 663 aa9.35□□□□□ -0.91
TUFT1-205ENST00000461859 NEUROD4Q9HD90 331 aa9.35□□□□□ -0.91
TUFT1-205ENST00000461859 DHX57Q6P158 1386 aaKnown RBP9.35□□□□□ -0.91
TUFT1-205ENST00000461859 USP32Q8NFA0 1604 aa9.34□□□□□ -0.91
TUFT1-205ENST00000461859 KHNYNO15037 678 aaKnown RBP9.34□□□□□ -0.91
TUFT1-205ENST00000461859 ZBTB7BO15156 539 aaPredicted RBP9.34□□□□□ -0.91
TUFT1-205ENST00000461859 FAM157BP0CG42 384 aa9.34□□□□□ -0.91
TUFT1-205ENST00000461859 ARAFP10398 606 aa9.34□□□□□ -0.91
TUFT1-205ENST00000461859 PSMA6P60900 246 aaKnown RBP9.34□□□□□ -0.91
TUFT1-205ENST00000461859 KRT28Q7Z3Y7 464 aa9.34□□□□□ -0.91
TUFT1-205ENST00000461859 TNS4Q8IZW8 715 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms