RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 NLRP2Q9NX02 1062 aa7.6□□□□□ -1.19
PRPF4B-202ENST00000461612 PODXL2Q9NZ53 605 aa7.6□□□□□ -1.19
PRPF4B-202ENST00000461612 STK17AQ9UEE5 414 aa7.6□□□□□ -1.19
PRPF4B-202ENST00000461612 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.6□□□□□ -1.19
PRPF4B-202ENST00000461612 A0A1W2PP55 124 aa7.59□□□□□ -1.19
PRPF4B-202ENST00000461612 GIPC1O14908 333 aa7.59□□□□□ -1.19
PRPF4B-202ENST00000461612 PRPF40AO75400 957 aaKnown RBP7.59□□□□□ -1.19
PRPF4B-202ENST00000461612 GRIK5Q16478 980 aa7.59□□□□□ -1.19
PRPF4B-202ENST00000461612 CEP135Q66GS9 1140 aa7.59□□□□□ -1.19
PRPF4B-202ENST00000461612 PODNQ7Z5L7 613 aa7.59□□□□□ -1.19
PRPF4B-202ENST00000461612 NXPE3Q969Y0 559 aa7.59□□□□□ -1.19
PRPF4B-202ENST00000461612 SCARF2Q96GP6 870 aaPredicted RBP7.59□□□□□ -1.19
PRPF4B-202ENST00000461612 ZKSCAN3Q9BRR0 538 aa7.59□□□□□ -1.19
PRPF4B-202ENST00000461612 NPHS2Q9NP85 383 aa7.59□□□□□ -1.19
PRPF4B-202ENST00000461612 PDE2AO00408 941 aaPredicted RBP7.58□□□□□ -1.2
PRPF4B-202ENST00000461612 AFF1P51825 1210 aaKnown RBP7.58□□□□□ -1.2
PRPF4B-202ENST00000461612 ATP11AP98196 1134 aa7.58□□□□□ -1.2
PRPF4B-202ENST00000461612 LINC00114Q6XXX2 140 aa7.58□□□□□ -1.2
PRPF4B-202ENST00000461612 FBXO33Q7Z6M2 555 aa7.58□□□□□ -1.2
PRPF4B-202ENST00000461612 BHLHE41Q9C0J9 482 aaPredicted RBP7.58□□□□□ -1.2
PRPF4B-202ENST00000461612 ADAM19Q9H013 955 aa7.58□□□□□ -1.2
PRPF4B-202ENST00000461612 MUC3BQ9H195 1237 aa7.58□□□□□ -1.2
PRPF4B-202ENST00000461612 SUV39H2Q9H5I1 410 aa7.58□□□□□ -1.2
PRPF4B-202ENST00000461612 PPP4R2Q9NY27 417 aa7.58□□□□□ -1.2
PRPF4B-202ENST00000461612 TRAK1Q9UPV9 953 aa7.58□□□□□ -1.2
PRPF4B-202ENST00000461612 SPDYE3A6NKU9 549 aa7.57□□□□□ -1.2
PRPF4B-202ENST00000461612 FAM177BA6PVY3 158 aa7.57□□□□□ -1.2
PRPF4B-202ENST00000461612 GNB5O14775 395 aa7.57□□□□□ -1.2
PRPF4B-202ENST00000461612 GADD45BO75293 160 aaPredicted RBP7.57□□□□□ -1.2
PRPF4B-202ENST00000461612 NID1P14543 1247 aa7.57□□□□□ -1.2
PRPF4B-202ENST00000461612 PTPRAP18433 802 aa7.57□□□□□ -1.2
PRPF4B-202ENST00000461612 ITGAEP38570 1179 aa7.57□□□□□ -1.2
PRPF4B-202ENST00000461612 POP1Q99575 1024 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-202ENST00000461612 SRCIN1Q9C0H9 1055 aa7.57□□□□□ -1.2
PRPF4B-202ENST00000461612 LIN7BQ9HAP6 207 aa7.57□□□□□ -1.2
PRPF4B-202ENST00000461612 LATS2Q9NRM7 1088 aa7.57□□□□□ -1.2
PRPF4B-202ENST00000461612 WWC3Q9ULE0 1092 aa7.57□□□□□ -1.2
PRPF4B-202ENST00000461612 ACPPP15309 386 aa7.56□□□□□ -1.2
PRPF4B-202ENST00000461612 SNRPNP63162 240 aaKnown RBP7.56□□□□□ -1.2
PRPF4B-202ENST00000461612 COL9A3Q14050 684 aaPredicted RBP7.56□□□□□ -1.2
PRPF4B-202ENST00000461612 ZNF326Q5BKZ1 582 aaKnown RBP7.56□□□□□ -1.2
PRPF4B-202ENST00000461612 MSL1Q68DK7 614 aa7.56□□□□□ -1.2
PRPF4B-202ENST00000461612 ILDR2Q71H61 639 aa7.56□□□□□ -1.2
PRPF4B-202ENST00000461612 WFDC8Q8IUA0 241 aa7.56□□□□□ -1.2
PRPF4B-202ENST00000461612 CCNJLQ8IV13 435 aa7.56□□□□□ -1.2
PRPF4B-202ENST00000461612 RGS22Q8NE09 1264 aa7.56□□□□□ -1.2
PRPF4B-202ENST00000461612 EPS8L3Q8TE67 593 aaKnown RBP7.56□□□□□ -1.2
PRPF4B-202ENST00000461612 BCL2L13Q9BXK5 485 aa7.56□□□□□ -1.2
PRPF4B-202ENST00000461612 EHD4Q9H223 541 aa7.56□□□□□ -1.2
PRPF4B-202ENST00000461612 TRIM33Q9UPN9 1127 aa7.56□□□□□ -1.2
PRPF4B-202ENST00000461612 SPG7Q9UQ90 795 aa7.56□□□□□ -1.2
PRPF4B-202ENST00000461612 CDC27P30260 824 aa7.55□□□□□ -1.2
PRPF4B-202ENST00000461612 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.55□□□□□ -1.2
PRPF4B-202ENST00000461612 GDF6Q6KF10 455 aaPredicted RBP7.55□□□□□ -1.2
PRPF4B-202ENST00000461612 PRPF40BQ6NWY9 871 aaKnown RBP7.55□□□□□ -1.2
PRPF4B-202ENST00000461612 C8orf86Q6ZUL3 223 aa7.55□□□□□ -1.2
PRPF4B-202ENST00000461612 TCF12Q99081 682 aa7.55□□□□□ -1.2
PRPF4B-202ENST00000461612 BCL11AQ9H165 835 aa7.55□□□□□ -1.2
PRPF4B-202ENST00000461612 ZFYVE1Q9HBF4 777 aa7.55□□□□□ -1.2
PRPF4B-202ENST00000461612 NOP53Q9NZM5 478 aaKnown RBP7.55□□□□□ -1.2
PRPF4B-202ENST00000461612 SCRIBQ14160 1630 aa7.54□□□□□ -1.2
PRPF4B-202ENST00000461612 CC2D2AQ9P2K1 1620 aa7.54□□□□□ -1.2
PRPF4B-202ENST00000461612 PTPN12Q05209 780 aaKnown RBP7.54□□□□□ -1.2
PRPF4B-202ENST00000461612 GRM2Q14416 872 aa7.54□□□□□ -1.2
PRPF4B-202ENST00000461612 DTWD1Q8N5C7 304 aa7.54□□□□□ -1.2
PRPF4B-202ENST00000461612 BSNDQ8WZ55 320 aa7.54□□□□□ -1.2
PRPF4B-202ENST00000461612 SRA1Q9HD15 236 aaKnown RBP7.54□□□□□ -1.2
PRPF4B-202ENST00000461612 CNTNAP5Q8WYK1 1306 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 UNC13AQ9UPW8 1703 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 TRPA1O75762 1119 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 XRCC5P13010 732 aaKnown RBP7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 GNA15P30679 374 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 IRS1P35568 1242 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 BAG6P46379 1132 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 CABP4P57796 275 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 XPCQ01831 940 aaPredicted RBP7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 TRAPPC3LQ5T215 181 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 ALYREFQ86V81 257 aaKnown RBP7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 MAP4K3Q8IVH8 894 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 IL22RA1Q8N6P7 574 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 DCAF11Q8TEB1 546 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 HHIPQ96QV1 700 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 SETDB2Q96T68 719 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 DUSP9Q99956 384 aaKnown RBP7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 PLVAPQ9BX97 442 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 BCO2Q9BYV7 579 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 SOX13Q9UN79 622 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 PPME1Q9Y570 386 aa7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 EIF4G1Q04637 1599 aaKnown RBP7.53□□□□□ -1.2
PRPF4B-202ENST00000461612 A0A096LPE4 126 aa7.52□□□□□ -1.21
PRPF4B-202ENST00000461612 A0A1W2PPZ6 126 aa7.52□□□□□ -1.21
PRPF4B-202ENST00000461612 RBM47A0AV96 593 aaKnown RBP7.52□□□□□ -1.21
PRPF4B-202ENST00000461612 RNF225M0QZC1 329 aaPredicted RBP7.52□□□□□ -1.21
PRPF4B-202ENST00000461612 EIF4EBP3O60516 100 aaPredicted RBP7.52□□□□□ -1.21
PRPF4B-202ENST00000461612 ITPKAP23677 461 aa7.52□□□□□ -1.21
PRPF4B-202ENST00000461612 DAB2P98082 770 aa7.52□□□□□ -1.21
PRPF4B-202ENST00000461612 PI16Q6UXB8 463 aa7.52□□□□□ -1.21
PRPF4B-202ENST00000461612 GLIS3Q8NEA6 775 aa7.52□□□□□ -1.21
PRPF4B-202ENST00000461612 GIPC2Q8TF65 315 aa7.52□□□□□ -1.21
PRPF4B-202ENST00000461612 WNT8BQ93098 351 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms