RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 SUCLG2Q96I99 432 aa19.67■□□□□ 0.74
NUP50-213ENST00000461437 SRCIN1Q9C0H9 1055 aa19.67■□□□□ 0.74
NUP50-213ENST00000461437 C9orf78Q9NZ63 289 aaPredicted RBP19.67■□□□□ 0.74
NUP50-213ENST00000461437 SCAF8Q9UPN6 1271 aaKnown RBP19.67■□□□□ 0.74
NUP50-213ENST00000461437 ZNF804BA4D1E1 1349 aa19.67■□□□□ 0.74
NUP50-213ENST00000461437 WDR33Q9C0J8 1336 aaKnown RBP19.67■□□□□ 0.74
NUP50-213ENST00000461437 USP17L3A6NCW0 530 aa19.66■□□□□ 0.74
NUP50-213ENST00000461437 USP17L4A6NCW7 530 aa19.66■□□□□ 0.74
NUP50-213ENST00000461437 CDC37L1Q7L3B6 337 aa19.66■□□□□ 0.74
NUP50-213ENST00000461437 USP17L1Q7RTZ2 530 aa19.66■□□□□ 0.74
NUP50-213ENST00000461437 ZC3H15Q8WU90 426 aaKnown RBP19.66■□□□□ 0.74
NUP50-213ENST00000461437 NBPF7P0C2Y1 421 aaPredicted RBP19.65■□□□□ 0.74
NUP50-213ENST00000461437 IFIT5Q13325 482 aaKnown RBP19.65■□□□□ 0.74
NUP50-213ENST00000461437 KAZALD1Q96I82 304 aa19.65■□□□□ 0.74
NUP50-213ENST00000461437 GGA3Q9NZ52 723 aa19.65■□□□□ 0.74
NUP50-213ENST00000461437 LEMD3Q9Y2U8 911 aa19.65■□□□□ 0.74
NUP50-213ENST00000461437 TLL2Q9Y6L7 1015 aa19.65■□□□□ 0.74
NUP50-213ENST00000461437 THSD7BQ9C0I4 1608 aa19.65■□□□□ 0.74
NUP50-213ENST00000461437 PLIN1O60240 522 aa19.64■□□□□ 0.73
NUP50-213ENST00000461437 ALDH1L1O75891 902 aa19.64■□□□□ 0.73
NUP50-213ENST00000461437 KCNJ4P48050 445 aa19.64■□□□□ 0.73
NUP50-213ENST00000461437 KRT26Q7Z3Y9 468 aa19.64■□□□□ 0.73
NUP50-213ENST00000461437 PODNQ7Z5L7 613 aa19.64■□□□□ 0.73
NUP50-213ENST00000461437 CAPNS2Q96L46 248 aa19.64■□□□□ 0.73
NUP50-213ENST00000461437 GMLQ99445 158 aa19.64■□□□□ 0.73
NUP50-213ENST00000461437 ANKRD2Q9GZV1 360 aa19.64■□□□□ 0.73
NUP50-213ENST00000461437 AOC2O75106 756 aa19.63■□□□□ 0.73
NUP50-213ENST00000461437 AGBL3Q8NEM8 1001 aa19.63■□□□□ 0.73
NUP50-213ENST00000461437 IRS2Q9Y4H2 1338 aa19.62■□□□□ 0.73
NUP50-213ENST00000461437 CCER2I3L3R5 266 aa19.62■□□□□ 0.73
NUP50-213ENST00000461437 SCARF1Q14162 830 aa19.62■□□□□ 0.73
NUP50-213ENST00000461437 TAF7LQ5H9L4 462 aa19.62■□□□□ 0.73
NUP50-213ENST00000461437 DACT2Q5SW24 774 aa19.62■□□□□ 0.73
NUP50-213ENST00000461437 SAPCD2Q86UD0 394 aa19.62■□□□□ 0.73
NUP50-213ENST00000461437 DCPSQ96C86 337 aaKnown RBP19.62■□□□□ 0.73
NUP50-213ENST00000461437 PUS3Q9BZE2 481 aaKnown RBP19.62■□□□□ 0.73
NUP50-213ENST00000461437 COA1Q9GZY4 146 aa19.62■□□□□ 0.73
NUP50-213ENST00000461437 ZNF609O15014 1411 aa19.61■□□□□ 0.73
NUP50-213ENST00000461437 USP17L8P0C7I0 530 aa19.61■□□□□ 0.73
NUP50-213ENST00000461437 ZNF280AP59817 542 aaPredicted RBP19.61■□□□□ 0.73
NUP50-213ENST00000461437 CCDC57Q2TAC2 916 aa19.61■□□□□ 0.73
NUP50-213ENST00000461437 ANGEL2Q5VTE6 544 aaKnown RBP19.61■□□□□ 0.73
NUP50-213ENST00000461437 MYOZ2Q9NPC6 264 aa19.61■□□□□ 0.73
NUP50-213ENST00000461437 JAG2Q9Y219 1238 aa19.61■□□□□ 0.73
NUP50-213ENST00000461437 GTF2IP78347 998 aa19.6■□□□□ 0.73
NUP50-213ENST00000461437 BICC1Q9H694 974 aaKnown RBP19.6■□□□□ 0.73
NUP50-213ENST00000461437 CNNM1Q9NRU3 951 aa19.6■□□□□ 0.73
NUP50-213ENST00000461437 SMC4Q9NTJ3 1288 aa19.6■□□□□ 0.73
NUP50-213ENST00000461437 WBP1LQ9NX94 342 aa19.6■□□□□ 0.73
NUP50-213ENST00000461437 NBPF9Q3BBW0 867 aa19.59■□□□□ 0.73
NUP50-213ENST00000461437 LDHAL6AQ6ZMR3 332 aa19.59■□□□□ 0.73
NUP50-213ENST00000461437 TRMT2AQ8IZ69 625 aaKnown RBP19.59■□□□□ 0.73
NUP50-213ENST00000461437 CD209Q9NNX6 404 aa19.59■□□□□ 0.73
NUP50-213ENST00000461437 PTPRCP08575 1304 aa19.58■□□□□ 0.73
NUP50-213ENST00000461437 STRIP1Q5VSL9 837 aa19.58■□□□□ 0.72
NUP50-213ENST00000461437 TTLL5Q6EMB2 1281 aa19.58■□□□□ 0.72
NUP50-213ENST00000461437 KIAA0825Q8IV33 1275 aa19.58■□□□□ 0.72
NUP50-213ENST00000461437 ANKRD44Q8N8A2 993 aa19.58■□□□□ 0.72
NUP50-213ENST00000461437 AIDAQ96BJ3 306 aa19.58■□□□□ 0.72
NUP50-213ENST00000461437 UTYO14607 1347 aa19.57■□□□□ 0.72
NUP50-213ENST00000461437 SASH1O94885 1247 aa19.57■□□□□ 0.72
NUP50-213ENST00000461437 ECE1P42892 770 aa19.57■□□□□ 0.72
NUP50-213ENST00000461437 HUNKP57058 714 aa19.57■□□□□ 0.72
NUP50-213ENST00000461437 PRAMEF18Q5VWM3 479 aa19.57■□□□□ 0.72
NUP50-213ENST00000461437 SULF1Q8IWU6 871 aa19.57■□□□□ 0.72
NUP50-213ENST00000461437 KLHDC4Q8TBB5 520 aa19.57■□□□□ 0.72
NUP50-213ENST00000461437 CDCA5Q96FF9 252 aa19.57■□□□□ 0.72
NUP50-213ENST00000461437 ZIC5Q96T25 663 aa19.57■□□□□ 0.72
NUP50-213ENST00000461437 TSKSQ9UJT2 592 aa19.57■□□□□ 0.72
NUP50-213ENST00000461437 ECM29Q5VYK3 1845 aa19.56■□□□□ 0.72
NUP50-213ENST00000461437 LBX1P52954 281 aa19.56■□□□□ 0.72
NUP50-213ENST00000461437 CERS5Q8N5B7 392 aa19.56■□□□□ 0.72
NUP50-213ENST00000461437 GBA2Q9HCG7 927 aaPredicted RBP19.56■□□□□ 0.72
NUP50-213ENST00000461437 PCDHAC2Q9Y5I4 1007 aa19.56■□□□□ 0.72
NUP50-213ENST00000461437 ALDH1L2Q3SY69 923 aa19.55■□□□□ 0.72
NUP50-213ENST00000461437 LRRC24Q50LG9 513 aa19.55■□□□□ 0.72
NUP50-213ENST00000461437 MIER1Q8N108 512 aa19.55■□□□□ 0.72
NUP50-213ENST00000461437 USP44Q9H0E7 712 aa19.55■□□□□ 0.72
NUP50-213ENST00000461437 NOB1Q9ULX3 412 aaKnown RBP19.55■□□□□ 0.72
NUP50-213ENST00000461437 F8W031 263 aaPredicted RBP19.54■□□□□ 0.72
NUP50-213ENST00000461437 HSPA8P11142 646 aaKnown RBP19.54■□□□□ 0.72
NUP50-213ENST00000461437 CTCFP49711 727 aaPredicted RBP19.54■□□□□ 0.72
NUP50-213ENST00000461437 MOB2Q70IA6 237 aa19.54■□□□□ 0.72
NUP50-213ENST00000461437 CASP8AP2Q9UKL3 1982 aa19.53■□□□□ 0.72
NUP50-213ENST00000461437 WNT10BO00744 389 aa19.53■□□□□ 0.72
NUP50-213ENST00000461437 GYG1P46976 350 aa19.53■□□□□ 0.72
NUP50-213ENST00000461437 MAP2K1Q02750 393 aaPredicted RBP19.53■□□□□ 0.72
NUP50-213ENST00000461437 RABL6Q3YEC7 729 aaPredicted RBP19.53■□□□□ 0.72
NUP50-213ENST00000461437 MYO3BQ8WXR4 1341 aa19.52■□□□□ 0.72
NUP50-213ENST00000461437 ARAP2Q8WZ64 1704 aa19.52■□□□□ 0.72
NUP50-213ENST00000461437 C15orf52Q6ZUT6 534 aaKnown RBP19.52■□□□□ 0.72
NUP50-213ENST00000461437 ZNF804AQ7Z570 1209 aa19.52■□□□□ 0.72
NUP50-213ENST00000461437 OGFOD1Q8N543 542 aa19.52■□□□□ 0.72
NUP50-213ENST00000461437 MYH13Q9UKX3 1938 aa19.51■□□□□ 0.71
NUP50-213ENST00000461437 IL1R1P14778 569 aa19.51■□□□□ 0.71
NUP50-213ENST00000461437 C2orf69Q8N8R5 385 aa19.51■□□□□ 0.71
NUP50-213ENST00000461437 RIPOR2Q9Y4F9 1068 aa19.51■□□□□ 0.71
NUP50-213ENST00000461437 AOX1Q06278 1338 aa19.51■□□□□ 0.71
NUP50-213ENST00000461437 PAPPA2Q9BXP8 1791 aa19.5■□□□□ 0.71
NUP50-213ENST00000461437 RGMBQ6NW40 437 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms