RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 GAS2L3Q86XJ1 694 aa24.07■■□□□ 1.44
CCM2-203ENST00000461377 LAMB2P55268 1798 aa24.07■■□□□ 1.44
CCM2-203ENST00000461377 HSP90B1P14625 803 aaKnown RBP24.07■■□□□ 1.44
CCM2-203ENST00000461377 FGFR2P21802 821 aa24.07■■□□□ 1.44
CCM2-203ENST00000461377 PUM3Q15397 648 aaKnown RBP24.07■■□□□ 1.44
CCM2-203ENST00000461377 ZNF652Q9Y2D9 606 aa24.07■■□□□ 1.44
CCM2-203ENST00000461377 APPBP2Q92624 585 aa24.06■■□□□ 1.44
CCM2-203ENST00000461377 GRPEL1Q9HAV7 217 aa24.06■■□□□ 1.44
CCM2-203ENST00000461377 ARAP2Q8WZ64 1704 aa24.06■■□□□ 1.44
CCM2-203ENST00000461377 HMGB1P09429 215 aaKnown RBP24.05■■□□□ 1.44
CCM2-203ENST00000461377 NCLP19338 710 aaKnown RBP24.05■■□□□ 1.44
CCM2-203ENST00000461377 ARID4AP29374 1257 aaPredicted RBP24.05■■□□□ 1.44
CCM2-203ENST00000461377 CAVIN1Q6NZI2 390 aaKnown RBP24.05■■□□□ 1.44
CCM2-203ENST00000461377 CLEC4GQ6UXB4 293 aa24.05■■□□□ 1.44
CCM2-203ENST00000461377 LPIN2Q92539 896 aa24.05■■□□□ 1.44
CCM2-203ENST00000461377 F13A1P00488 732 aa24.05■■□□□ 1.44
CCM2-203ENST00000461377 CCDC152Q4G0S7 254 aa24.05■■□□□ 1.44
CCM2-203ENST00000461377 MTMR6Q9Y217 621 aa24.05■■□□□ 1.44
CCM2-203ENST00000461377 AKAP11Q9UKA4 1901 aa24.05■■□□□ 1.44
CCM2-203ENST00000461377 SPATA31A6Q5VVP1 1343 aa24.05■■□□□ 1.44
CCM2-203ENST00000461377 CNTNAP4Q9C0A0 1308 aa24.05■■□□□ 1.44
CCM2-203ENST00000461377 MBD3O95983 291 aa24.04■■□□□ 1.44
CCM2-203ENST00000461377 THSD7AQ9UPZ6 1657 aa24.04■■□□□ 1.44
CCM2-203ENST00000461377 ZNF445P59923 1031 aa24.03■■□□□ 1.44
CCM2-203ENST00000461377 WASHC4Q2M389 1173 aa24.03■■□□□ 1.44
CCM2-203ENST00000461377 CCDC102BQ68D86 513 aa24.03■■□□□ 1.44
CCM2-203ENST00000461377 Q6ZUG5 572 aa24.03■■□□□ 1.44
CCM2-203ENST00000461377 SEC31BQ9NQW1 1179 aa24.03■■□□□ 1.44
CCM2-203ENST00000461377 UQCRFS1P1P0C7P4 283 aa24.03■■□□□ 1.44
CCM2-203ENST00000461377 PHKA1P46020 1223 aa24.03■■□□□ 1.44
CCM2-203ENST00000461377 TTF1Q15361 905 aaPredicted RBP24.03■■□□□ 1.44
CCM2-203ENST00000461377 TMEM87AQ8NBN3 555 aa24.03■■□□□ 1.44
CCM2-203ENST00000461377 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.03■■□□□ 1.44
CCM2-203ENST00000461377 RGL2O15211 777 aa24.02■■□□□ 1.44
CCM2-203ENST00000461377 FOXP2O15409 715 aa24.02■■□□□ 1.44
CCM2-203ENST00000461377 PDIA4P13667 645 aaKnown RBP24.02■■□□□ 1.44
CCM2-203ENST00000461377 ZSCAN23Q3MJ62 389 aa24.02■■□□□ 1.44
CCM2-203ENST00000461377 DHX32Q7L7V1 743 aaKnown RBP24.02■■□□□ 1.44
CCM2-203ENST00000461377 HELBQ8NG08 1087 aaPredicted RBP24.02■■□□□ 1.44
CCM2-203ENST00000461377 MPHOSPH8Q99549 860 aa24.02■■□□□ 1.44
CCM2-203ENST00000461377 USP21Q9UK80 565 aa24.02■■□□□ 1.44
CCM2-203ENST00000461377 E7EWF7 191 aa24.02■■□□□ 1.43
CCM2-203ENST00000461377 ZSCAN25Q6NSZ9 544 aa24.02■■□□□ 1.43
CCM2-203ENST00000461377 ATP6V1DQ9Y5K8 247 aa24.02■■□□□ 1.43
CCM2-203ENST00000461377 A0A0G2JLW4 131 aa24.01■■□□□ 1.43
CCM2-203ENST00000461377 SLC5A1P13866 664 aa24.01■■□□□ 1.43
CCM2-203ENST00000461377 ADD2P35612 726 aa24.01■■□□□ 1.43
CCM2-203ENST00000461377 EXOSC10Q01780 885 aaKnown RBP24.01■■□□□ 1.43
CCM2-203ENST00000461377 FOXD4L6Q3SYB3 417 aaPredicted RBP24.01■■□□□ 1.43
CCM2-203ENST00000461377 FOXD4L3Q6VB84 417 aaPredicted RBP24.01■■□□□ 1.43
CCM2-203ENST00000461377 PTF1AQ7RTS3 328 aa24.01■■□□□ 1.43
CCM2-203ENST00000461377 GTF3C6Q969F1 213 aa24.01■■□□□ 1.43
CCM2-203ENST00000461377 PUS7LQ9H0K6 701 aaKnown RBP24.01■■□□□ 1.43
CCM2-203ENST00000461377 NSFL1CQ9UNZ2 370 aaKnown RBP24.01■■□□□ 1.43
CCM2-203ENST00000461377 ATRNO75882 1429 aa24.01■■□□□ 1.43
CCM2-203ENST00000461377 DTNBO60941 627 aa24■■□□□ 1.43
CCM2-203ENST00000461377 CTNNA3Q9UI47 895 aa24■■□□□ 1.43
CCM2-203ENST00000461377 MYH7P12883 1935 aa24■■□□□ 1.43
CCM2-203ENST00000461377 LAMA4Q16363 1823 aa24■■□□□ 1.43
CCM2-203ENST00000461377 AGXT2Q9BYV1 514 aa24■■□□□ 1.43
CCM2-203ENST00000461377 PIH1D3Q9NQM4 214 aaKnown RBP24■■□□□ 1.43
CCM2-203ENST00000461377 RBM27Q9P2N5 1060 aaKnown RBP24■■□□□ 1.43
CCM2-203ENST00000461377 IGHMBP2P38935 993 aaKnown RBP23.99■■□□□ 1.43
CCM2-203ENST00000461377 STK3Q13188 491 aa23.99■■□□□ 1.43
CCM2-203ENST00000461377 TTLL5Q6EMB2 1281 aa23.99■■□□□ 1.43
CCM2-203ENST00000461377 USP48Q86UV5 1035 aa23.99■■□□□ 1.43
CCM2-203ENST00000461377 PANK2Q9BZ23 570 aa23.99■■□□□ 1.43
CCM2-203ENST00000461377 SCN7AQ01118 1682 aa23.99■■□□□ 1.43
CCM2-203ENST00000461377 NHSQ6T4R5 1651 aa23.99■■□□□ 1.43
CCM2-203ENST00000461377 PDCP20941 246 aa23.98■■□□□ 1.43
CCM2-203ENST00000461377 KCNQ4P56696 695 aa23.98■■□□□ 1.43
CCM2-203ENST00000461377 RC3H1Q5TC82 1133 aaKnown RBP23.98■■□□□ 1.43
CCM2-203ENST00000461377 LARP1BQ659C4 914 aaKnown RBP23.98■■□□□ 1.43
CCM2-203ENST00000461377 BRF1Q92994 677 aa23.98■■□□□ 1.43
CCM2-203ENST00000461377 GDPD2Q9HCC8 539 aa23.98■■□□□ 1.43
CCM2-203ENST00000461377 GPAA1O43292 621 aa23.98■■□□□ 1.43
CCM2-203ENST00000461377 TMEM63CQ9P1W3 806 aa23.98■■□□□ 1.43
CCM2-203ENST00000461377 CNPY2Q9Y2B0 182 aa23.98■■□□□ 1.43
CCM2-203ENST00000461377 UBE3CQ15386 1083 aa23.97■■□□□ 1.43
CCM2-203ENST00000461377 LRRC2Q9BYS8 371 aa23.97■■□□□ 1.43
CCM2-203ENST00000461377 VPS37CA5D8V6 355 aaPredicted RBP23.96■■□□□ 1.43
CCM2-203ENST00000461377 SLC9C2Q5TAH2 1124 aa23.96■■□□□ 1.43
CCM2-203ENST00000461377 BTAF1O14981 1849 aa23.96■■□□□ 1.43
CCM2-203ENST00000461377 FGAP02671 866 aa23.96■■□□□ 1.43
CCM2-203ENST00000461377 IMMTQ16891 758 aaKnown RBP23.96■■□□□ 1.43
CCM2-203ENST00000461377 PFKFB2O60825 505 aa23.95■■□□□ 1.42
CCM2-203ENST00000461377 GADD45BO75293 160 aaPredicted RBP23.95■■□□□ 1.42
CCM2-203ENST00000461377 FGD1P98174 961 aa23.95■■□□□ 1.42
CCM2-203ENST00000461377 ERFEQ4G0M1 354 aa23.95■■□□□ 1.42
CCM2-203ENST00000461377 SPATA5Q8NB90 893 aa23.95■■□□□ 1.42
CCM2-203ENST00000461377 SNAP23O00161 211 aa23.94■■□□□ 1.42
CCM2-203ENST00000461377 RPS6KA4O75676 772 aa23.94■■□□□ 1.42
CCM2-203ENST00000461377 SF3B3Q15393 1217 aaKnown RBP23.94■■□□□ 1.42
CCM2-203ENST00000461377 FBXL16Q8N461 479 aa23.94■■□□□ 1.42
CCM2-203ENST00000461377 CDC5LQ99459 802 aaKnown RBP23.94■■□□□ 1.42
CCM2-203ENST00000461377 BCL2L12Q9HB09 334 aa23.94■■□□□ 1.42
CCM2-203ENST00000461377 IDH1O75874 414 aaKnown RBP23.94■■□□□ 1.42
CCM2-203ENST00000461377 PDE6AP16499 860 aa23.94■■□□□ 1.42
CCM2-203ENST00000461377 COL4A1P02462 1669 aa23.93■■□□□ 1.42
CCM2-203ENST00000461377 TCRBV5S4A2TA0A5A2 114 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms