RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 FBXW7Q969H0 707 aa19.35■□□□□ 0.69
VARS-219ENST00000461328 ZNF609O15014 1411 aa19.34■□□□□ 0.69
VARS-219ENST00000461328 UTYO14607 1347 aa19.34■□□□□ 0.69
VARS-219ENST00000461328 TAF5LO75529 589 aa19.34■□□□□ 0.69
VARS-219ENST00000461328 KLRK1P26718 216 aa19.34■□□□□ 0.69
VARS-219ENST00000461328 BRPF1P55201 1214 aaPredicted RBP19.34■□□□□ 0.69
VARS-219ENST00000461328 DEFB115Q30KQ5 88 aa19.34■□□□□ 0.69
VARS-219ENST00000461328 LDHAL6AQ6ZMR3 332 aa19.34■□□□□ 0.69
VARS-219ENST00000461328 TXNRD3Q86VQ6 643 aa19.34■□□□□ 0.69
VARS-219ENST00000461328 HELBQ8NG08 1087 aaPredicted RBP19.34■□□□□ 0.69
VARS-219ENST00000461328 ZNF594Q96JF6 807 aaPredicted RBP19.34■□□□□ 0.69
VARS-219ENST00000461328 CNNM1Q9NRU3 951 aa19.34■□□□□ 0.69
VARS-219ENST00000461328 PSME4Q14997 1843 aa19.34■□□□□ 0.69
VARS-219ENST00000461328 RASSF10A6NK89 507 aa19.33■□□□□ 0.68
VARS-219ENST00000461328 CELF2O95319 508 aaKnown RBP19.33■□□□□ 0.68
VARS-219ENST00000461328 HSPA1AP0DMV8 641 aaKnown RBP19.33■□□□□ 0.68
VARS-219ENST00000461328 HSPA1BP0DMV9 641 aaKnown RBP19.33■□□□□ 0.68
VARS-219ENST00000461328 VEGFBP49765 207 aa19.33■□□□□ 0.68
VARS-219ENST00000461328 CST9Q5W186 159 aa19.33■□□□□ 0.68
VARS-219ENST00000461328 FRAT1Q92837 279 aaPredicted RBP19.33■□□□□ 0.68
VARS-219ENST00000461328 BICC1Q9H694 974 aaKnown RBP19.33■□□□□ 0.68
VARS-219ENST00000461328 ZNF408Q9H9D4 720 aa19.33■□□□□ 0.68
VARS-219ENST00000461328 TRPM7Q96QT4 1865 aa19.33■□□□□ 0.68
VARS-219ENST00000461328 USP17L8P0C7I0 530 aa19.32■□□□□ 0.68
VARS-219ENST00000461328 ZNF280AP59817 542 aaPredicted RBP19.32■□□□□ 0.68
VARS-219ENST00000461328 USP48Q86UV5 1035 aa19.32■□□□□ 0.68
VARS-219ENST00000461328 DCPSQ96C86 337 aaKnown RBP19.32■□□□□ 0.68
VARS-219ENST00000461328 KAZALD1Q96I82 304 aa19.32■□□□□ 0.68
VARS-219ENST00000461328 SNAP23O00161 211 aa19.31■□□□□ 0.68
VARS-219ENST00000461328 IPO8O15397 1037 aaKnown RBP19.31■□□□□ 0.68
VARS-219ENST00000461328 PLIN1O60240 522 aa19.31■□□□□ 0.68
VARS-219ENST00000461328 DACT2Q5SW24 774 aa19.31■□□□□ 0.68
VARS-219ENST00000461328 STRIP1Q5VSL9 837 aa19.31■□□□□ 0.68
VARS-219ENST00000461328 PAXIP1Q6ZW49 1069 aaPredicted RBP19.31■□□□□ 0.68
VARS-219ENST00000461328 KRT26Q7Z3Y9 468 aa19.31■□□□□ 0.68
VARS-219ENST00000461328 GMLQ99445 158 aa19.31■□□□□ 0.68
VARS-219ENST00000461328 USP44Q9H0E7 712 aa19.31■□□□□ 0.68
VARS-219ENST00000461328 MYO3BQ8WXR4 1341 aa19.3■□□□□ 0.68
VARS-219ENST00000461328 BCAR3O75815 825 aa19.3■□□□□ 0.68
VARS-219ENST00000461328 MXD3Q9BW11 206 aa19.3■□□□□ 0.68
VARS-219ENST00000461328 GGA3Q9NZ52 723 aa19.3■□□□□ 0.68
VARS-219ENST00000461328 TLL2Q9Y6L7 1015 aa19.3■□□□□ 0.68
VARS-219ENST00000461328 A0A1B0GUL6 1792 aa19.29■□□□□ 0.68
VARS-219ENST00000461328 UBTFL1P0CB47 393 aaPredicted RBP19.29■□□□□ 0.68
VARS-219ENST00000461328 RABL6Q3YEC7 729 aaPredicted RBP19.29■□□□□ 0.68
VARS-219ENST00000461328 TTLL5Q6EMB2 1281 aa19.29■□□□□ 0.68
VARS-219ENST00000461328 C15orf52Q6ZUT6 534 aaKnown RBP19.29■□□□□ 0.68
VARS-219ENST00000461328 OGFOD1Q8N543 542 aa19.29■□□□□ 0.68
VARS-219ENST00000461328 ARHGAP45Q92619 1136 aa19.29■□□□□ 0.68
VARS-219ENST00000461328 CD209Q9NNX6 404 aa19.29■□□□□ 0.68
VARS-219ENST00000461328 MYOZ2Q9NPC6 264 aa19.29■□□□□ 0.68
VARS-219ENST00000461328 WDR33Q9C0J8 1336 aaKnown RBP19.28■□□□□ 0.68
VARS-219ENST00000461328 GTF2IP78347 998 aa19.28■□□□□ 0.68
VARS-219ENST00000461328 ZNF804AQ7Z570 1209 aa19.28■□□□□ 0.68
VARS-219ENST00000461328 SULF1Q8IWU6 871 aa19.28■□□□□ 0.68
VARS-219ENST00000461328 ANKRD44Q8N8A2 993 aa19.28■□□□□ 0.68
VARS-219ENST00000461328 ASTN2O75129 1339 aaPredicted RBP19.27■□□□□ 0.68
VARS-219ENST00000461328 IRS2Q9Y4H2 1338 aa19.27■□□□□ 0.68
VARS-219ENST00000461328 ADM5C9JUS6 153 aa19.27■□□□□ 0.68
VARS-219ENST00000461328 ECE1P42892 770 aa19.27■□□□□ 0.68
VARS-219ENST00000461328 GRM1Q13255 1194 aa19.27■□□□□ 0.68
VARS-219ENST00000461328 SCARF1Q14162 830 aa19.27■□□□□ 0.68
VARS-219ENST00000461328 ANGEL2Q5VTE6 544 aaKnown RBP19.27■□□□□ 0.68
VARS-219ENST00000461328 DLK2Q6UY11 383 aa19.27■□□□□ 0.68
VARS-219ENST00000461328 PUS3Q9BZE2 481 aaKnown RBP19.27■□□□□ 0.68
VARS-219ENST00000461328 TRIM27P14373 513 aa19.26■□□□□ 0.67
VARS-219ENST00000461328 CYP4F22Q6NT55 531 aa19.26■□□□□ 0.67
VARS-219ENST00000461328 ATF7IPQ6VMQ6 1270 aa19.26■□□□□ 0.67
VARS-219ENST00000461328 SAPCD2Q86UD0 394 aa19.26■□□□□ 0.67
VARS-219ENST00000461328 CAPNS2Q96L46 248 aa19.26■□□□□ 0.67
VARS-219ENST00000461328 HDAC5Q9UQL6 1122 aa19.26■□□□□ 0.67
VARS-219ENST00000461328 MROH5Q6ZUA9 1318 aa19.25■□□□□ 0.67
VARS-219ENST00000461328 CLUAP1Q96AJ1 413 aa19.25■□□□□ 0.67
VARS-219ENST00000461328 AIDAQ96BJ3 306 aa19.25■□□□□ 0.67
VARS-219ENST00000461328 HDAC9Q9UKV0 1011 aa19.25■□□□□ 0.67
VARS-219ENST00000461328 ZNF646O15015 1829 aaPredicted RBP19.25■□□□□ 0.67
VARS-219ENST00000461328 PCNTO95613 3336 aa19.25■□□□□ 0.67
VARS-219ENST00000461328 IL1R1P14778 569 aa19.24■□□□□ 0.67
VARS-219ENST00000461328 UBE4AQ14139 1066 aa19.24■□□□□ 0.67
VARS-219ENST00000461328 ZKSCAN2Q63HK3 967 aa19.24■□□□□ 0.67
VARS-219ENST00000461328 KIAA0825Q8IV33 1275 aa19.24■□□□□ 0.67
VARS-219ENST00000461328 MEIS3Q99687 375 aa19.24■□□□□ 0.67
VARS-219ENST00000461328 RIPOR2Q9Y4F9 1068 aa19.24■□□□□ 0.67
VARS-219ENST00000461328 MMP14P50281 582 aa19.23■□□□□ 0.67
VARS-219ENST00000461328 METTL24Q5JXM2 366 aa19.23■□□□□ 0.67
VARS-219ENST00000461328 INTS3Q68E01 1043 aaKnown RBP19.23■□□□□ 0.67
VARS-219ENST00000461328 HHIPL1Q96JK4 782 aa19.23■□□□□ 0.67
VARS-219ENST00000461328 TNNQ9UQP3 1299 aa19.23■□□□□ 0.67
VARS-219ENST00000461328 LRRFIP2Q9Y608 721 aaKnown RBP19.23■□□□□ 0.67
VARS-219ENST00000461328 PITPNM2Q9BZ72 1349 aa19.23■□□□□ 0.67
VARS-219ENST00000461328 GNAI3P08754 354 aa19.22■□□□□ 0.67
VARS-219ENST00000461328 NBPF9Q3BBW0 867 aa19.22■□□□□ 0.67
VARS-219ENST00000461328 LRRC24Q50LG9 513 aa19.22■□□□□ 0.67
VARS-219ENST00000461328 COL13A1Q5TAT6 717 aaPredicted RBP19.22■□□□□ 0.67
VARS-219ENST00000461328 FTSJ3Q8IY81 847 aaKnown RBP19.22■□□□□ 0.67
VARS-219ENST00000461328 C2orf69Q8N8R5 385 aa19.22■□□□□ 0.67
VARS-219ENST00000461328 KLHDC4Q8TBB5 520 aa19.22■□□□□ 0.67
VARS-219ENST00000461328 CDCA5Q96FF9 252 aa19.22■□□□□ 0.67
VARS-219ENST00000461328 GBA2Q9HCG7 927 aaPredicted RBP19.22■□□□□ 0.67
VARS-219ENST00000461328 POLR2AP24928 1970 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms