RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 METTL24Q5JXM2 366 aa20.2■□□□□ 0.82
SHANK1-205ENST00000461154 HELBQ8NG08 1087 aaPredicted RBP20.2■□□□□ 0.82
SHANK1-205ENST00000461154 SCN4AP35499 1836 aa20.2■□□□□ 0.82
SHANK1-205ENST00000461154 SCNN1DP51172 638 aa20.19■□□□□ 0.82
SHANK1-205ENST00000461154 ATP8B2P98198 1209 aa20.19■□□□□ 0.82
SHANK1-205ENST00000461154 CHADLQ6NUI6 762 aa20.19■□□□□ 0.82
SHANK1-205ENST00000461154 LDHDQ86WU2 507 aa20.19■□□□□ 0.82
SHANK1-205ENST00000461154 SIL1Q9H173 461 aa20.19■□□□□ 0.82
SHANK1-205ENST00000461154 ZBTB40Q9NUA8 1239 aa20.19■□□□□ 0.82
SHANK1-205ENST00000461154 UBE4AQ14139 1066 aa20.18■□□□□ 0.82
SHANK1-205ENST00000461154 EAPPQ56P03 285 aaPredicted RBP20.18■□□□□ 0.82
SHANK1-205ENST00000461154 GPRC5DQ9NZD1 345 aa20.18■□□□□ 0.82
SHANK1-205ENST00000461154 PNMA6EA0A0J9YXQ4 647 aa20.17■□□□□ 0.82
SHANK1-205ENST00000461154 IL15P40933 162 aaPredicted RBP20.17■□□□□ 0.82
SHANK1-205ENST00000461154 EPS15P42566 896 aa20.17■□□□□ 0.82
SHANK1-205ENST00000461154 GMPSP49915 693 aaPredicted RBP20.17■□□□□ 0.82
SHANK1-205ENST00000461154 PODNQ7Z5L7 613 aa20.17■□□□□ 0.82
SHANK1-205ENST00000461154 PA2G4Q9UQ80 394 aaKnown RBP20.17■□□□□ 0.82
SHANK1-205ENST00000461154 PSMD14O00487 310 aa20.16■□□□□ 0.82
SHANK1-205ENST00000461154 PDE8BO95263 885 aa20.16■□□□□ 0.82
SHANK1-205ENST00000461154 POTEIP0CG38 1075 aa20.16■□□□□ 0.82
SHANK1-205ENST00000461154 POTEJP0CG39 1038 aa20.16■□□□□ 0.82
SHANK1-205ENST00000461154 APLP1P51693 650 aa20.16■□□□□ 0.82
SHANK1-205ENST00000461154 POLA2Q14181 598 aa20.16■□□□□ 0.82
SHANK1-205ENST00000461154 CEP85Q6P2H3 762 aa20.16■□□□□ 0.82
SHANK1-205ENST00000461154 C15orf52Q6ZUT6 534 aaKnown RBP20.16■□□□□ 0.82
SHANK1-205ENST00000461154 ATG9AQ7Z3C6 839 aa20.16■□□□□ 0.82
SHANK1-205ENST00000461154 SSH3Q8TE77 659 aa20.16■□□□□ 0.82
SHANK1-205ENST00000461154 CLEC11AQ9Y240 323 aa20.16■□□□□ 0.82
SHANK1-205ENST00000461154 WTIPA6NIX2 430 aaPredicted RBP20.15■□□□□ 0.82
SHANK1-205ENST00000461154 RPS12P25398 132 aaKnown RBP20.15■□□□□ 0.82
SHANK1-205ENST00000461154 USP50Q70EL3 339 aaPredicted RBP20.15■□□□□ 0.82
SHANK1-205ENST00000461154 RPAP2Q8IXW5 612 aaPredicted RBP20.15■□□□□ 0.82
SHANK1-205ENST00000461154 VGLL2Q8N8G2 317 aa20.15■□□□□ 0.82
SHANK1-205ENST00000461154 DPF2Q92785 391 aa20.15■□□□□ 0.82
SHANK1-205ENST00000461154 COA1Q9GZY4 146 aa20.15■□□□□ 0.82
SHANK1-205ENST00000461154 ADARB2Q9NS39 739 aaKnown RBP20.15■□□□□ 0.82
SHANK1-205ENST00000461154 CEP126Q9P2H0 1117 aa20.15■□□□□ 0.82
SHANK1-205ENST00000461154 VIL1P09327 827 aaKnown RBP20.14■□□□□ 0.81
SHANK1-205ENST00000461154 G3BP1Q13283 466 aaKnown RBP eCLIP20.14■□□□□ 0.81
SHANK1-205ENST00000461154 PUM3Q15397 648 aaKnown RBP20.14■□□□□ 0.81
SHANK1-205ENST00000461154 KCNQ5Q9NR82 932 aa20.14■□□□□ 0.81
SHANK1-205ENST00000461154 H7C1D1 291 aa20.13■□□□□ 0.81
SHANK1-205ENST00000461154 SNAP23O00161 211 aa20.13■□□□□ 0.81
SHANK1-205ENST00000461154 HMMRO75330 724 aa20.13■□□□□ 0.81
SHANK1-205ENST00000461154 ZNF804AQ7Z570 1209 aa20.13■□□□□ 0.81
SHANK1-205ENST00000461154 CNOT7Q9UIV1 285 aaKnown RBP20.13■□□□□ 0.81
SHANK1-205ENST00000461154 ZBTB12Q9Y330 459 aaPredicted RBP20.13■□□□□ 0.81
SHANK1-205ENST00000461154 IFIT1P09914 478 aaKnown RBP20.12■□□□□ 0.81
SHANK1-205ENST00000461154 KLRK1P26718 216 aa20.12■□□□□ 0.81
SHANK1-205ENST00000461154 TXNRD3Q86VQ6 643 aa20.12■□□□□ 0.81
SHANK1-205ENST00000461154 SUPT16HQ9Y5B9 1047 aaKnown RBP20.12■□□□□ 0.81
SHANK1-205ENST00000461154 IRS2Q9Y4H2 1338 aa20.11■□□□□ 0.81
SHANK1-205ENST00000461154 USP17L3A6NCW0 530 aa20.11■□□□□ 0.81
SHANK1-205ENST00000461154 USP17L4A6NCW7 530 aa20.11■□□□□ 0.81
SHANK1-205ENST00000461154 SLC5A1P13866 664 aa20.11■□□□□ 0.81
SHANK1-205ENST00000461154 OS9Q13438 667 aaPredicted RBP20.11■□□□□ 0.81
SHANK1-205ENST00000461154 USP17L1Q7RTZ2 530 aa20.11■□□□□ 0.81
SHANK1-205ENST00000461154 LPIN2Q92539 896 aa20.11■□□□□ 0.81
SHANK1-205ENST00000461154 SURF6O75683 361 aaKnown RBP20.1■□□□□ 0.81
SHANK1-205ENST00000461154 CAVIN4Q5BKX8 364 aa20.1■□□□□ 0.81
SHANK1-205ENST00000461154 MICALL2Q8IY33 904 aa20.1■□□□□ 0.81
SHANK1-205ENST00000461154 AGBL3Q8NEM8 1001 aa20.1■□□□□ 0.81
SHANK1-205ENST00000461154 CD209Q9NNX6 404 aa20.1■□□□□ 0.81
SHANK1-205ENST00000461154 AKAP2Q9Y2D5 859 aa20.1■□□□□ 0.81
SHANK1-205ENST00000461154 PSME4Q14997 1843 aa20.09■□□□□ 0.81
SHANK1-205ENST00000461154 FGFR2P21802 821 aa20.09■□□□□ 0.81
SHANK1-205ENST00000461154 ATP2B3Q16720 1220 aa20.09■□□□□ 0.81
SHANK1-205ENST00000461154 RSBN1LQ6PCB5 846 aaPredicted RBP20.09■□□□□ 0.81
SHANK1-205ENST00000461154 VPS37DQ86XT2 251 aa20.09■□□□□ 0.81
SHANK1-205ENST00000461154 CNTROBQ8N137 903 aa20.09■□□□□ 0.81
SHANK1-205ENST00000461154 CRBNQ96SW2 442 aa20.09■□□□□ 0.81
SHANK1-205ENST00000461154 NOP58Q9Y2X3 529 aaKnown RBP20.09■□□□□ 0.81
SHANK1-205ENST00000461154 SCN9AQ15858 1988 aa20.08■□□□□ 0.81
SHANK1-205ENST00000461154 HIBADHP31937 336 aaKnown RBP20.08■□□□□ 0.81
SHANK1-205ENST00000461154 HSP90AB4PQ58FF6 505 aa20.08■□□□□ 0.81
SHANK1-205ENST00000461154 STRIP1Q5VSL9 837 aa20.08■□□□□ 0.81
SHANK1-205ENST00000461154 MAP1SQ66K74 1059 aaPredicted RBP20.08■□□□□ 0.81
SHANK1-205ENST00000461154 ITGBL1O95965 494 aaPredicted RBP20.07■□□□□ 0.8
SHANK1-205ENST00000461154 IL1R1P14778 569 aa20.07■□□□□ 0.8
SHANK1-205ENST00000461154 GYG1P46976 350 aa20.07■□□□□ 0.8
SHANK1-205ENST00000461154 TFCP2Q12800 502 aa20.07■□□□□ 0.8
SHANK1-205ENST00000461154 AAMPQ13685 434 aa20.07■□□□□ 0.8
SHANK1-205ENST00000461154 ZC3H15Q8WU90 426 aaKnown RBP20.07■□□□□ 0.8
SHANK1-205ENST00000461154 TTLL5Q6EMB2 1281 aa20.06■□□□□ 0.8
SHANK1-205ENST00000461154 FBXO33Q7Z6M2 555 aa20.06■□□□□ 0.8
SHANK1-205ENST00000461154 ERC1Q8IUD2 1116 aa20.06■□□□□ 0.8
SHANK1-205ENST00000461154 FBXW7Q969H0 707 aa20.06■□□□□ 0.8
SHANK1-205ENST00000461154 FAM84BQ96KN1 310 aaPredicted RBP20.06■□□□□ 0.8
SHANK1-205ENST00000461154 MYO3BQ8WXR4 1341 aa20.05■□□□□ 0.8
SHANK1-205ENST00000461154 PASKQ96RG2 1323 aa20.05■□□□□ 0.8
SHANK1-205ENST00000461154 ZNF609O15014 1411 aa20.05■□□□□ 0.8
SHANK1-205ENST00000461154 SHTN1A0MZ66 631 aa20.05■□□□□ 0.8
SHANK1-205ENST00000461154 DACT2Q5SW24 774 aa20.05■□□□□ 0.8
SHANK1-205ENST00000461154 SIRT2Q8IXJ6 389 aa20.05■□□□□ 0.8
SHANK1-205ENST00000461154 GMLQ99445 158 aa20.05■□□□□ 0.8
SHANK1-205ENST00000461154 PGAP2Q9UHJ9 254 aa20.05■□□□□ 0.8
SHANK1-205ENST00000461154 ADAMTSL1Q8N6G6 1762 aa20.05■□□□□ 0.8
SHANK1-205ENST00000461154 ARAP2Q8WZ64 1704 aa20.05■□□□□ 0.8
SHANK1-205ENST00000461154 SASH1O94885 1247 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms