RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 FKTNO75072 461 aa15.17■□□□□ 0.02
PCYT1A-213ENST00000460827 MKRN3Q13064 507 aaKnown RBP15.17■□□□□ 0.02
PCYT1A-213ENST00000460827 HDGFL1Q5TGJ6 251 aa15.17■□□□□ 0.02
PCYT1A-213ENST00000460827 USP17L1Q7RTZ2 530 aa15.17■□□□□ 0.02
PCYT1A-213ENST00000460827 LMOD3Q0VAK6 560 aa15.16■□□□□ 0.02
PCYT1A-213ENST00000460827 PODNQ7Z5L7 613 aa15.16■□□□□ 0.02
PCYT1A-213ENST00000460827 ZBTB38Q8NAP3 1195 aaPredicted RBP15.16■□□□□ 0.02
PCYT1A-213ENST00000460827 DBF4Q9UBU7 674 aaPredicted RBP15.16■□□□□ 0.02
PCYT1A-213ENST00000460827 CUL9Q8IWT3 2517 aa15.16■□□□□ 0.02
PCYT1A-213ENST00000460827 RBBP6Q7Z6E9 1792 aaKnown RBP15.16■□□□□ 0.02
PCYT1A-213ENST00000460827 WTIPA6NIX2 430 aaPredicted RBP15.15■□□□□ 0.02
PCYT1A-213ENST00000460827 HOXB7P09629 217 aa15.15■□□□□ 0.02
PCYT1A-213ENST00000460827 PTPN12Q05209 780 aaKnown RBP15.15■□□□□ 0.02
PCYT1A-213ENST00000460827 SREBF2Q12772 1141 aa15.15■□□□□ 0.02
PCYT1A-213ENST00000460827 TTLL12Q14166 644 aaPredicted RBP15.15■□□□□ 0.02
PCYT1A-213ENST00000460827 XDHP47989 1333 aa15.15■□□□□ 0.02
PCYT1A-213ENST00000460827 COL6A3P12111 3177 aa15.14■□□□□ 0.01
PCYT1A-213ENST00000460827 POTEFA5A3E0 1075 aa15.14■□□□□ 0.01
PCYT1A-213ENST00000460827 WNT10BO00744 389 aa15.14■□□□□ 0.01
PCYT1A-213ENST00000460827 DACT2Q5SW24 774 aa15.14■□□□□ 0.01
PCYT1A-213ENST00000460827 MXD3Q9BW11 206 aa15.14■□□□□ 0.01
PCYT1A-213ENST00000460827 HYPKQ9NX55 129 aa15.14■□□□□ 0.01
PCYT1A-213ENST00000460827 LAMB1P07942 1786 aa15.13■□□□□ 0.01
PCYT1A-213ENST00000460827 CCDC152Q4G0S7 254 aa15.13■□□□□ 0.01
PCYT1A-213ENST00000460827 LDLRAD1Q5T700 205 aa15.13■□□□□ 0.01
PCYT1A-213ENST00000460827 SPRYD7Q5W111 196 aa15.13■□□□□ 0.01
PCYT1A-213ENST00000460827 PDE8AO60658 829 aa15.12■□□□□ 0.01
PCYT1A-213ENST00000460827 ATP2B4P23634 1241 aa15.12■□□□□ 0.01
PCYT1A-213ENST00000460827 NF2P35240 595 aa15.12■□□□□ 0.01
PCYT1A-213ENST00000460827 OTOP1Q7RTM1 612 aa15.12■□□□□ 0.01
PCYT1A-213ENST00000460827 CCDC85AQ96PX6 553 aaPredicted RBP15.12■□□□□ 0.01
PCYT1A-213ENST00000460827 TRIM35Q9UPQ4 493 aa15.12■□□□□ 0.01
PCYT1A-213ENST00000460827 LAS1LQ9Y4W2 734 aaKnown RBP15.12■□□□□ 0.01
PCYT1A-213ENST00000460827 SPEF2Q9C093 1822 aa15.12■□□□□ 0.01
PCYT1A-213ENST00000460827 PCCAP05165 728 aaPredicted RBP15.11■□□□□ 0.01
PCYT1A-213ENST00000460827 HSP90B1P14625 803 aaKnown RBP15.11■□□□□ 0.01
PCYT1A-213ENST00000460827 FXR1P51114 621 aaKnown RBP eCLIP15.11■□□□□ 0.01
PCYT1A-213ENST00000460827 PRKG1Q13976 671 aa15.11■□□□□ 0.01
PCYT1A-213ENST00000460827 NEUROD2Q15784 382 aa15.11■□□□□ 0.01
PCYT1A-213ENST00000460827 DUSP27Q5VZP5 1158 aa15.11■□□□□ 0.01
PCYT1A-213ENST00000460827 INTS3Q68E01 1043 aaKnown RBP15.11■□□□□ 0.01
PCYT1A-213ENST00000460827 ARMC9Q7Z3E5 817 aa15.11■□□□□ 0.01
PCYT1A-213ENST00000460827 ANKRD18AQ8IVF6 992 aa15.11■□□□□ 0.01
PCYT1A-213ENST00000460827 JARID2Q92833 1246 aaPredicted RBP15.11■□□□□ 0.01
PCYT1A-213ENST00000460827 TRIM17Q9Y577 477 aa15.11■□□□□ 0.01
PCYT1A-213ENST00000460827 MYH3P11055 1940 aa15.11■□□□□ 0.01
PCYT1A-213ENST00000460827 MED23Q9ULK4 1368 aa15.11■□□□□ 0.01
PCYT1A-213ENST00000460827 SASH1O94885 1247 aa15.1■□□□□ 0.01
PCYT1A-213ENST00000460827 ALDH1A1P00352 501 aa15.1■□□□□ 0.01
PCYT1A-213ENST00000460827 STRIP1Q5VSL9 837 aa15.1■□□□□ 0.01
PCYT1A-213ENST00000460827 RIC3Q7Z5B4 369 aa15.1■□□□□ 0.01
PCYT1A-213ENST00000460827 OGFOD1Q8N543 542 aa15.1■□□□□ 0.01
PCYT1A-213ENST00000460827 CCDC191Q8NCU4 936 aa15.1■□□□□ 0.01
PCYT1A-213ENST00000460827 ZBED3Q96IU2 234 aaPredicted RBP15.1■□□□□ 0.01
PCYT1A-213ENST00000460827 IFNL1Q8IU54 200 aa15.09■□□□□ 0.01
PCYT1A-213ENST00000460827 MYD88Q99836 296 aa15.09■□□□□ 0.01
PCYT1A-213ENST00000460827 PHAXQ9H814 394 aaKnown RBP15.09■□□□□ 0.01
PCYT1A-213ENST00000460827 MINPP1Q9UNW1 487 aa15.09■□□□□ 0.01
PCYT1A-213ENST00000460827 FZD1Q9UP38 647 aa15.09■□□□□ 0.01
PCYT1A-213ENST00000460827 LAMA3Q16787 3333 aa15.08■□□□□ 0
PCYT1A-213ENST00000460827 IGF2BP3O00425 579 aaKnown RBP eCLIP15.08■□□□□ 0
PCYT1A-213ENST00000460827 GOLGA2Q08379 1002 aa15.08■□□□□ 0
PCYT1A-213ENST00000460827 TXNRD3Q86VQ6 643 aa15.08■□□□□ 0
PCYT1A-213ENST00000460827 CCDC146Q8IYE0 955 aa15.08■□□□□ 0
PCYT1A-213ENST00000460827 ANGEL1Q9UNK9 670 aaKnown RBP15.08■□□□□ 0
PCYT1A-213ENST00000460827 MYO3BQ8WXR4 1341 aa15.08■□□□□ 0
PCYT1A-213ENST00000460827 SSC5DA1L4H1 1573 aa15.07■□□□□ 0
PCYT1A-213ENST00000460827 MANSC4A6NHS7 340 aaPredicted RBP15.07■□□□□ 0
PCYT1A-213ENST00000460827 EN2P19622 333 aaPredicted RBP15.07■□□□□ 0
PCYT1A-213ENST00000460827 MMP14P50281 582 aa15.07■□□□□ 0
PCYT1A-213ENST00000460827 INHBEP58166 350 aa15.07■□□□□ 0
PCYT1A-213ENST00000460827 APOBEC3FQ8IUX4 373 aaKnown RBP15.07■□□□□ 0
PCYT1A-213ENST00000460827 ARMC5Q96C12 935 aa15.07■□□□□ 0
PCYT1A-213ENST00000460827 COA1Q9GZY4 146 aa15.07■□□□□ 0
PCYT1A-213ENST00000460827 BSDC1Q9NW68 430 aaPredicted RBP15.07■□□□□ 0
PCYT1A-213ENST00000460827 CWC25Q9NXE8 425 aaPredicted RBP15.07■□□□□ 0
PCYT1A-213ENST00000460827 PTPN22Q9Y2R2 807 aa15.07■□□□□ 0
PCYT1A-213ENST00000460827 ECM29Q5VYK3 1845 aa15.06■□□□□ 0
PCYT1A-213ENST00000460827 CCT4P50991 539 aaKnown RBP15.06■□□□□ 0
PCYT1A-213ENST00000460827 CTSWP56202 376 aa15.06■□□□□ 0
PCYT1A-213ENST00000460827 CAP1Q01518 475 aa15.06■□□□□ 0
PCYT1A-213ENST00000460827 MAP3K11Q16584 847 aa15.06■□□□□ 0
PCYT1A-213ENST00000460827 FBXW7Q969H0 707 aa15.06■□□□□ 0
PCYT1A-213ENST00000460827 CLMNQ96JQ2 1002 aa15.06■□□□□ 0
PCYT1A-213ENST00000460827 CDC5LQ99459 802 aaKnown RBP15.06■□□□□ 0
PCYT1A-213ENST00000460827 MBIPQ9NS73 344 aa15.06■□□□□ 0
PCYT1A-213ENST00000460827 COL1A1P02452 1464 aaPredicted RBP15.06■□□□□ 0
PCYT1A-213ENST00000460827 ZBTB48P10074 688 aaPredicted RBP15.05■□□□□ -0
PCYT1A-213ENST00000460827 TTLL5Q6EMB2 1281 aa15.05■□□□□ -0
PCYT1A-213ENST00000460827 KIAA0825Q8IV33 1275 aa15.05■□□□□ -0
PCYT1A-213ENST00000460827 TTLL11Q8NHH1 800 aa15.05■□□□□ -0
PCYT1A-213ENST00000460827 CD99L2Q8TCZ2 262 aa15.05■□□□□ -0
PCYT1A-213ENST00000460827 SLC10A4Q96EP9 437 aa15.05■□□□□ -0
PCYT1A-213ENST00000460827 WNK4Q96J92 1243 aa15.05■□□□□ -0
PCYT1A-213ENST00000460827 METTL22Q9BUU2 404 aaPredicted RBP15.05■□□□□ -0
PCYT1A-213ENST00000460827 DEFB129Q9H1M3 183 aa15.05■□□□□ -0
PCYT1A-213ENST00000460827 KLRK1P26718 216 aa15.04■□□□□ -0
PCYT1A-213ENST00000460827 ERO1AQ96HE7 468 aa15.04■□□□□ -0
PCYT1A-213ENST00000460827 GREM2Q9H772 168 aa15.04■□□□□ -0
PCYT1A-213ENST00000460827 ZNF853P0CG23 659 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms