RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 PROSER3Q2NL68 480 aa13.94□□□□□ -0.18
CPNE6-202ENST00000460657 MFSD6Q6ZSS7 791 aa13.94□□□□□ -0.18
CPNE6-202ENST00000460657 JAK2O60674 1132 aa13.94□□□□□ -0.18
CPNE6-202ENST00000460657 ERCC4Q92889 916 aaPredicted RBP13.94□□□□□ -0.18
CPNE6-202ENST00000460657 GTF3C6Q969F1 213 aa13.94□□□□□ -0.18
CPNE6-202ENST00000460657 COL3A1P02461 1466 aaPredicted RBP13.93□□□□□ -0.18
CPNE6-202ENST00000460657 NAA16Q6N069 864 aaPredicted RBP13.93□□□□□ -0.18
CPNE6-202ENST00000460657 NDUFB9Q9Y6M9 179 aa13.93□□□□□ -0.18
CPNE6-202ENST00000460657 TSPOAP1O95153 1857 aa13.93□□□□□ -0.18
CPNE6-202ENST00000460657 TMCO3Q6UWJ1 677 aa13.93□□□□□ -0.18
CPNE6-202ENST00000460657 CCDC191Q8NCU4 936 aa13.93□□□□□ -0.18
CPNE6-202ENST00000460657 MYRIPQ8NFW9 859 aa13.93□□□□□ -0.18
CPNE6-202ENST00000460657 IQCA1Q86XH1 822 aa13.93□□□□□ -0.18
CPNE6-202ENST00000460657 ZNHIT6Q9NWK9 470 aaKnown RBP13.93□□□□□ -0.18
CPNE6-202ENST00000460657 NSFL1CQ9UNZ2 370 aaKnown RBP13.93□□□□□ -0.18
CPNE6-202ENST00000460657 KLHL10Q6JEL2 608 aa13.92□□□□□ -0.18
CPNE6-202ENST00000460657 CRB1P82279 1406 aa13.92□□□□□ -0.18
CPNE6-202ENST00000460657 PCDH11XQ9BZA7 1347 aa13.92□□□□□ -0.18
CPNE6-202ENST00000460657 PCDH11YQ9BZA8 1340 aa13.92□□□□□ -0.18
CPNE6-202ENST00000460657 MARCKSP29966 332 aaPredicted RBP13.92□□□□□ -0.18
CPNE6-202ENST00000460657 ZNF75DP51815 510 aa13.92□□□□□ -0.18
CPNE6-202ENST00000460657 CAVIN4Q5BKX8 364 aa13.92□□□□□ -0.18
CPNE6-202ENST00000460657 TTC6Q86TZ1 520 aa13.92□□□□□ -0.18
CPNE6-202ENST00000460657 C17orf53Q8N3J3 647 aaPredicted RBP13.92□□□□□ -0.18
CPNE6-202ENST00000460657 ZNF652Q9Y2D9 606 aa13.92□□□□□ -0.18
CPNE6-202ENST00000460657 CDC42BPGQ6DT37 1551 aa13.92□□□□□ -0.18
CPNE6-202ENST00000460657 USP31Q70CQ4 1352 aa13.92□□□□□ -0.18
CPNE6-202ENST00000460657 CYP2E1P05181 493 aaPredicted RBP13.92□□□□□ -0.18
CPNE6-202ENST00000460657 IL2RBP14784 551 aa13.92□□□□□ -0.18
CPNE6-202ENST00000460657 CAGE1Q8TC20 777 aa13.92□□□□□ -0.18
CPNE6-202ENST00000460657 KRT23Q9C075 422 aa13.92□□□□□ -0.18
CPNE6-202ENST00000460657 COPRSQ9NQ92 184 aa13.92□□□□□ -0.18
CPNE6-202ENST00000460657 ATP10DQ9P241 1426 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 NCOA3Q9Y6Q9 1424 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 LIG1P18858 919 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 UBASH3AP57075 661 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 KANK3Q6NY19 840 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 CTCFLQ8NI51 663 aaPredicted RBP13.91□□□□□ -0.18
CPNE6-202ENST00000460657 CNNM2Q9H8M5 875 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 RAD21O60216 631 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 ARHGAP29Q52LW3 1261 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 ARHGEF25Q86VW2 580 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 DSCC1Q9BVC3 393 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 NCOA5Q9HCD5 579 aaKnown RBP13.91□□□□□ -0.18
CPNE6-202ENST00000460657 ZDHHC9Q9Y397 364 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 ADGRB2O60241 1585 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 MROH1Q8NDA8 1641 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 RANBP6O60518 1105 aaKnown RBP13.91□□□□□ -0.18
CPNE6-202ENST00000460657 ERLIN1O75477 346 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 DDIT3P35638 169 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 ANKARQ7Z5J8 1434 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 CCDC94Q9BW85 323 aaPredicted RBP13.91□□□□□ -0.18
CPNE6-202ENST00000460657 ZMYND15Q9H091 742 aa13.91□□□□□ -0.18
CPNE6-202ENST00000460657 A0A1B0GVL5 298 aa13.9□□□□□ -0.18
CPNE6-202ENST00000460657 GOLGA6L9A6NEM1 432 aa13.9□□□□□ -0.18
CPNE6-202ENST00000460657 PHKG2P15735 406 aa13.9□□□□□ -0.18
CPNE6-202ENST00000460657 WTAPQ15007 396 aa13.9□□□□□ -0.18
CPNE6-202ENST00000460657 CATIPQ7Z7H3 387 aa13.9□□□□□ -0.18
CPNE6-202ENST00000460657 SPDYE4A6NLX3 237 aa13.9□□□□□ -0.18
CPNE6-202ENST00000460657 CPS1P31327 1500 aa13.9□□□□□ -0.18
CPNE6-202ENST00000460657 ERBB4Q15303 1308 aa13.9□□□□□ -0.18
CPNE6-202ENST00000460657 EXOC5O00471 708 aa13.9□□□□□ -0.18
CPNE6-202ENST00000460657 TAF5LO75529 589 aa13.9□□□□□ -0.18
CPNE6-202ENST00000460657 CASQ1P31415 396 aa13.9□□□□□ -0.18
CPNE6-202ENST00000460657 TMTC2Q8N394 836 aa13.9□□□□□ -0.18
CPNE6-202ENST00000460657 CDK5RAP3Q96JB5 506 aa13.9□□□□□ -0.18
CPNE6-202ENST00000460657 LMOD1P29536 600 aaPredicted RBP13.89□□□□□ -0.19
CPNE6-202ENST00000460657 NAP1L1P55209 391 aaKnown RBP13.89□□□□□ -0.19
CPNE6-202ENST00000460657 APPBP2Q92624 585 aa13.89□□□□□ -0.19
CPNE6-202ENST00000460657 TMEM87AQ8NBN3 555 aa13.89□□□□□ -0.19
CPNE6-202ENST00000460657 ZNF594Q96JF6 807 aaPredicted RBP13.89□□□□□ -0.19
CPNE6-202ENST00000460657 HAUS7Q99871 368 aa13.89□□□□□ -0.19
CPNE6-202ENST00000460657 TLR7Q9NYK1 1049 aaKnown RBP13.89□□□□□ -0.19
CPNE6-202ENST00000460657 MTX1Q13505 466 aa13.89□□□□□ -0.19
CPNE6-202ENST00000460657 ELP1O95163 1332 aa13.89□□□□□ -0.19
CPNE6-202ENST00000460657 TUBB4AP04350 444 aa13.89□□□□□ -0.19
CPNE6-202ENST00000460657 RTN1Q16799 776 aa13.89□□□□□ -0.19
CPNE6-202ENST00000460657 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
CPNE6-202ENST00000460657 ARHGEF28Q8N1W1 1705 aaKnown RBP13.88□□□□□ -0.19
CPNE6-202ENST00000460657 CLSTN1O94985 981 aa13.88□□□□□ -0.19
CPNE6-202ENST00000460657 TRIM34Q9BYJ4 488 aa13.88□□□□□ -0.19
CPNE6-202ENST00000460657 E7EWF7 191 aa13.88□□□□□ -0.19
CPNE6-202ENST00000460657 KIF5CO60282 957 aa13.88□□□□□ -0.19
CPNE6-202ENST00000460657 NECTIN1Q15223 517 aa13.88□□□□□ -0.19
CPNE6-202ENST00000460657 XAGE2Q96GT9 111 aa13.88□□□□□ -0.19
CPNE6-202ENST00000460657 IFNKQ9P0W0 207 aa13.88□□□□□ -0.19
CPNE6-202ENST00000460657 OVOS2A0A0J9YW53 1432 aa13.88□□□□□ -0.19
CPNE6-202ENST00000460657 OVOS2Q6IE36 1432 aa13.88□□□□□ -0.19
CPNE6-202ENST00000460657 FRMPD1Q5SYB0 1578 aa13.88□□□□□ -0.19
CPNE6-202ENST00000460657 LARGE1O95461 756 aa13.88□□□□□ -0.19
CPNE6-202ENST00000460657 A1BGP04217 495 aa13.88□□□□□ -0.19
CPNE6-202ENST00000460657 SOGA3Q5TF21 947 aa13.88□□□□□ -0.19
CPNE6-202ENST00000460657 AK7Q96M32 723 aa13.88□□□□□ -0.19
CPNE6-202ENST00000460657 SEC62Q99442 399 aaKnown RBP13.88□□□□□ -0.19
CPNE6-202ENST00000460657 CWC15Q9P013 229 aaKnown RBP13.88□□□□□ -0.19
CPNE6-202ENST00000460657 DBNLQ9UJU6 430 aaKnown RBP13.88□□□□□ -0.19
CPNE6-202ENST00000460657 CD163L1Q9NR16 1453 aa13.88□□□□□ -0.19
CPNE6-202ENST00000460657 CDC5LQ99459 802 aaKnown RBP13.87□□□□□ -0.19
CPNE6-202ENST00000460657 PFKFB2O60825 505 aa13.87□□□□□ -0.19
CPNE6-202ENST00000460657 FAM89AQ96GI7 184 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms