RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 CTSWP56202 376 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 ST5P78524 1137 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 CREB3L3Q68CJ9 461 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 PRPF40BQ6NWY9 871 aaKnown RBP20.26■□□□□ 0.83
YIPF3-205ENST00000460547 TPTE2Q6XPS3 522 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 EDC3Q96F86 508 aaKnown RBP20.26■□□□□ 0.83
YIPF3-205ENST00000460547 PUS3Q9BZE2 481 aaKnown RBP20.26■□□□□ 0.83
YIPF3-205ENST00000460547 ZSWIM6Q9HCJ5 1215 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 SH3TC1Q8TE82 1336 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 MYH3P11055 1940 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 ABCC12Q96J65 1359 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 H0YIN7 160 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 PDE6BP35913 854 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 TTLL11Q8NHH1 800 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 BRIP1Q9BX63 1249 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 HMG20BQ9P0W2 317 aa20.26■□□□□ 0.83
YIPF3-205ENST00000460547 SCN7AQ01118 1682 aa20.25■□□□□ 0.83
YIPF3-205ENST00000460547 FAM177BA6PVY3 158 aa20.25■□□□□ 0.83
YIPF3-205ENST00000460547 GOLGA6L22H0YM25 854 aa20.25■□□□□ 0.83
YIPF3-205ENST00000460547 BAG4O95429 457 aaKnown RBP20.25■□□□□ 0.83
YIPF3-205ENST00000460547 GTF2E1P29083 439 aaPredicted RBP20.25■□□□□ 0.83
YIPF3-205ENST00000460547 SKOR2Q2VWA4 1001 aaPredicted RBP20.25■□□□□ 0.83
YIPF3-205ENST00000460547 TSGA10IPQ3SY00 556 aa20.25■□□□□ 0.83
YIPF3-205ENST00000460547 DALRD3Q5D0E6 543 aaKnown RBP20.25■□□□□ 0.83
YIPF3-205ENST00000460547 VPS53Q5VIR6 699 aa20.25■□□□□ 0.83
YIPF3-205ENST00000460547 RNF20Q5VTR2 975 aa20.25■□□□□ 0.83
YIPF3-205ENST00000460547 CCDC24Q8N4L8 307 aa20.25■□□□□ 0.83
YIPF3-205ENST00000460547 NEUROD6Q96NK8 337 aa20.25■□□□□ 0.83
YIPF3-205ENST00000460547 DNAJC2Q99543 621 aaKnown RBP20.25■□□□□ 0.83
YIPF3-205ENST00000460547 UBN2Q6ZU65 1347 aa20.25■□□□□ 0.83
YIPF3-205ENST00000460547 IRS4O14654 1257 aaPredicted RBP20.24■□□□□ 0.83
YIPF3-205ENST00000460547 SLC27A2O14975 620 aa20.24■□□□□ 0.83
YIPF3-205ENST00000460547 PDE8AO60658 829 aa20.24■□□□□ 0.83
YIPF3-205ENST00000460547 TAF5LO75529 589 aa20.24■□□□□ 0.83
YIPF3-205ENST00000460547 TIMM10P62072 90 aa20.24■□□□□ 0.83
YIPF3-205ENST00000460547 ZNF589Q86UQ0 364 aaPredicted RBP20.24■□□□□ 0.83
YIPF3-205ENST00000460547 C2CD5Q86YS7 1000 aa20.24■□□□□ 0.83
YIPF3-205ENST00000460547 PAG1Q9NWQ8 432 aa20.24■□□□□ 0.83
YIPF3-205ENST00000460547 LIMCH1Q9UPQ0 1083 aa20.24■□□□□ 0.83
YIPF3-205ENST00000460547 KIF13BQ9NQT8 1826 aa20.24■□□□□ 0.83
YIPF3-205ENST00000460547 CASTP20810 708 aaKnown RBP20.23■□□□□ 0.83
YIPF3-205ENST00000460547 AK2P54819 239 aa20.23■□□□□ 0.83
YIPF3-205ENST00000460547 TAF7LQ5H9L4 462 aa20.23■□□□□ 0.83
YIPF3-205ENST00000460547 JAKMIP1Q96N16 626 aaKnown RBP20.23■□□□□ 0.83
YIPF3-205ENST00000460547 TRMT112Q9UI30 125 aaKnown RBP20.23■□□□□ 0.83
YIPF3-205ENST00000460547 CYP46A1Q9Y6A2 500 aa20.23■□□□□ 0.83
YIPF3-205ENST00000460547 KCNJ4P48050 445 aa20.22■□□□□ 0.83
YIPF3-205ENST00000460547 ZDHHC9Q9Y397 364 aa20.22■□□□□ 0.83
YIPF3-205ENST00000460547 ANKRD18BA2A2Z9 1011 aa20.22■□□□□ 0.83
YIPF3-205ENST00000460547 PSMA5P28066 241 aa20.22■□□□□ 0.83
YIPF3-205ENST00000460547 PKP1Q13835 747 aa20.22■□□□□ 0.83
YIPF3-205ENST00000460547 MCMDC2Q4G0Z9 681 aa20.22■□□□□ 0.83
YIPF3-205ENST00000460547 DDX46Q7L014 1031 aaKnown RBP20.22■□□□□ 0.83
YIPF3-205ENST00000460547 RUFY3Q7L099 469 aa20.22■□□□□ 0.83
YIPF3-205ENST00000460547 GREM2Q9H772 168 aa20.22■□□□□ 0.83
YIPF3-205ENST00000460547 RIPOR2Q9Y4F9 1068 aa20.22■□□□□ 0.83
YIPF3-205ENST00000460547 BCORQ6W2J9 1755 aa20.21■□□□□ 0.83
YIPF3-205ENST00000460547 IFIT1P09914 478 aaKnown RBP20.21■□□□□ 0.83
YIPF3-205ENST00000460547 ITGA6P23229 1130 aa20.21■□□□□ 0.83
YIPF3-205ENST00000460547 ADCK5Q3MIX3 580 aa20.21■□□□□ 0.83
YIPF3-205ENST00000460547 PARP10Q53GL7 1025 aa20.21■□□□□ 0.83
YIPF3-205ENST00000460547 SYNE4Q8N205 404 aa20.21■□□□□ 0.83
YIPF3-205ENST00000460547 NYXQ9GZU5 481 aa20.21■□□□□ 0.83
YIPF3-205ENST00000460547 ALDH8A1Q9H2A2 487 aaPredicted RBP20.21■□□□□ 0.83
YIPF3-205ENST00000460547 HELLSQ9NRZ9 838 aa20.21■□□□□ 0.83
YIPF3-205ENST00000460547 LAMB2P55268 1798 aa20.21■□□□□ 0.83
YIPF3-205ENST00000460547 GOLGB1Q14789 3259 aaKnown RBP20.2■□□□□ 0.82
YIPF3-205ENST00000460547 BRD1O95696 1058 aa20.2■□□□□ 0.82
YIPF3-205ENST00000460547 ARHGAP27Q6ZUM4 889 aa20.2■□□□□ 0.82
YIPF3-205ENST00000460547 ZNF622Q969S3 477 aaKnown RBP eCLIP20.2■□□□□ 0.82
YIPF3-205ENST00000460547 ZSCAN31Q96LW9 406 aaPredicted RBP20.2■□□□□ 0.82
YIPF3-205ENST00000460547 PDRG1Q9NUG6 133 aa20.2■□□□□ 0.82
YIPF3-205ENST00000460547 U3KPZ7 1027 aaPredicted RBP20.2■□□□□ 0.82
YIPF3-205ENST00000460547 NRXN2Q9P2S2 1712 aa20.2■□□□□ 0.82
YIPF3-205ENST00000460547 GOLIM4O00461 696 aa20.19■□□□□ 0.82
YIPF3-205ENST00000460547 CCDC158Q5M9N0 1113 aa20.19■□□□□ 0.82
YIPF3-205ENST00000460547 NOL8Q76FK4 1167 aaKnown RBP20.19■□□□□ 0.82
YIPF3-205ENST00000460547 TTLL6Q8N841 843 aa20.19■□□□□ 0.82
YIPF3-205ENST00000460547 SH2B1Q9NRF2 756 aaPredicted RBP20.19■□□□□ 0.82
YIPF3-205ENST00000460547 NDUFB9Q9Y6M9 179 aa20.19■□□□□ 0.82
YIPF3-205ENST00000460547 KRT32Q14532 448 aa20.19■□□□□ 0.82
YIPF3-205ENST00000460547 ZMYM1Q5SVZ6 1142 aa20.19■□□□□ 0.82
YIPF3-205ENST00000460547 RTL9Q8NET4 1388 aa20.19■□□□□ 0.82
YIPF3-205ENST00000460547 XAGE2Q96GT9 111 aa20.19■□□□□ 0.82
YIPF3-205ENST00000460547 LRRFIP1Q32MZ4 808 aaKnown RBP20.18■□□□□ 0.82
YIPF3-205ENST00000460547 LDHAL6AQ6ZMR3 332 aa20.18■□□□□ 0.82
YIPF3-205ENST00000460547 VGLL2Q8N8G2 317 aa20.18■□□□□ 0.82
YIPF3-205ENST00000460547 ZNF512BQ96KM6 892 aaPredicted RBP20.18■□□□□ 0.82
YIPF3-205ENST00000460547 HSP90B1P14625 803 aaKnown RBP20.17■□□□□ 0.82
YIPF3-205ENST00000460547 ATP2B3Q16720 1220 aa20.17■□□□□ 0.82
YIPF3-205ENST00000460547 METTL24Q5JXM2 366 aa20.17■□□□□ 0.82
YIPF3-205ENST00000460547 CCDC85AQ96PX6 553 aaPredicted RBP20.17■□□□□ 0.82
YIPF3-205ENST00000460547 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.17■□□□□ 0.82
YIPF3-205ENST00000460547 KIAA1551Q9HCM1 1747 aa20.17■□□□□ 0.82
YIPF3-205ENST00000460547 ARAP2Q8WZ64 1704 aa20.16■□□□□ 0.82
YIPF3-205ENST00000460547 ADORA1P30542 326 aa20.16■□□□□ 0.82
YIPF3-205ENST00000460547 TTC39AQ5SRH9 613 aa20.16■□□□□ 0.82
YIPF3-205ENST00000460547 SUSD4Q5VX71 490 aa20.16■□□□□ 0.82
YIPF3-205ENST00000460547 DSCC1Q9BVC3 393 aa20.16■□□□□ 0.82
YIPF3-205ENST00000460547 UTP14AQ9BVJ6 771 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms