RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 TXNRD3Q86VQ6 643 aa20.63■□□□□ 0.89
SMARCD3-204ENST00000460431 CLUAP1Q96AJ1 413 aa20.63■□□□□ 0.89
SMARCD3-204ENST00000460431 MEIS3Q99687 375 aa20.63■□□□□ 0.89
SMARCD3-204ENST00000460431 PUS3Q9BZE2 481 aaKnown RBP20.63■□□□□ 0.89
SMARCD3-204ENST00000460431 RIPOR2Q9Y4F9 1068 aa20.63■□□□□ 0.89
SMARCD3-204ENST00000460431 VIL1P09327 827 aaKnown RBP20.62■□□□□ 0.89
SMARCD3-204ENST00000460431 KCNJ4P48050 445 aa20.62■□□□□ 0.89
SMARCD3-204ENST00000460431 DPF2Q92785 391 aa20.62■□□□□ 0.89
SMARCD3-204ENST00000460431 SNAP23O00161 211 aa20.61■□□□□ 0.89
SMARCD3-204ENST00000460431 GNAI3P08754 354 aa20.61■□□□□ 0.89
SMARCD3-204ENST00000460431 C15orf52Q6ZUT6 534 aaKnown RBP20.61■□□□□ 0.89
SMARCD3-204ENST00000460431 COA1Q9GZY4 146 aa20.61■□□□□ 0.89
SMARCD3-204ENST00000460431 ZBTB12Q9Y330 459 aaPredicted RBP20.61■□□□□ 0.89
SMARCD3-204ENST00000460431 LRRFIP2Q9Y608 721 aaKnown RBP20.61■□□□□ 0.89
SMARCD3-204ENST00000460431 IRS2Q9Y4H2 1338 aa20.6■□□□□ 0.89
SMARCD3-204ENST00000460431 RPS12P25398 132 aaKnown RBP20.6■□□□□ 0.89
SMARCD3-204ENST00000460431 KLRK1P26718 216 aa20.6■□□□□ 0.89
SMARCD3-204ENST00000460431 RFX5P48382 616 aaPredicted RBP20.6■□□□□ 0.89
SMARCD3-204ENST00000460431 ADARB2Q9NS39 739 aaKnown RBP20.6■□□□□ 0.89
SMARCD3-204ENST00000460431 CNOT7Q9UIV1 285 aaKnown RBP20.6■□□□□ 0.89
SMARCD3-204ENST00000460431 PLIN1O60240 522 aa20.59■□□□□ 0.89
SMARCD3-204ENST00000460431 VEGFBP49765 207 aa20.59■□□□□ 0.89
SMARCD3-204ENST00000460431 FMR1Q06787 632 aaKnown RBP eCLIP20.59■□□□□ 0.89
SMARCD3-204ENST00000460431 LRRC24Q50LG9 513 aa20.59■□□□□ 0.89
SMARCD3-204ENST00000460431 TMEM57Q8N5G2 664 aa20.59■□□□□ 0.89
SMARCD3-204ENST00000460431 KLHDC4Q8TBB5 520 aa20.59■□□□□ 0.89
SMARCD3-204ENST00000460431 MROH5Q6ZUA9 1318 aa20.58■□□□□ 0.89
SMARCD3-204ENST00000460431 USP17L3A6NCW0 530 aa20.58■□□□□ 0.89
SMARCD3-204ENST00000460431 USP17L4A6NCW7 530 aa20.58■□□□□ 0.89
SMARCD3-204ENST00000460431 RASSF10A6NK89 507 aa20.58■□□□□ 0.89
SMARCD3-204ENST00000460431 USP17L1Q7RTZ2 530 aa20.58■□□□□ 0.89
SMARCD3-204ENST00000460431 DZIP1LQ8IYY4 767 aaKnown RBP20.58■□□□□ 0.89
SMARCD3-204ENST00000460431 H7C1D1 291 aa20.57■□□□□ 0.88
SMARCD3-204ENST00000460431 PTPN12Q05209 780 aaKnown RBP20.57■□□□□ 0.88
SMARCD3-204ENST00000460431 UBE4AQ14139 1066 aa20.57■□□□□ 0.88
SMARCD3-204ENST00000460431 ZNF609O15014 1411 aa20.56■□□□□ 0.88
SMARCD3-204ENST00000460431 ZNF646O15015 1829 aaPredicted RBP20.56■□□□□ 0.88
SMARCD3-204ENST00000460431 SHTN1A0MZ66 631 aa20.56■□□□□ 0.88
SMARCD3-204ENST00000460431 DEFB115Q30KQ5 88 aa20.56■□□□□ 0.88
SMARCD3-204ENST00000460431 RSBN1LQ6PCB5 846 aaPredicted RBP20.56■□□□□ 0.88
SMARCD3-204ENST00000460431 MICALL2Q8IY33 904 aa20.56■□□□□ 0.88
SMARCD3-204ENST00000460431 FTSJ3Q8IY81 847 aaKnown RBP20.56■□□□□ 0.88
SMARCD3-204ENST00000460431 AGBL3Q8NEM8 1001 aa20.56■□□□□ 0.88
SMARCD3-204ENST00000460431 CD209Q9NNX6 404 aa20.56■□□□□ 0.88
SMARCD3-204ENST00000460431 PGAP2Q9UHJ9 254 aa20.56■□□□□ 0.88
SMARCD3-204ENST00000460431 POLR2AP24928 1970 aaKnown RBP20.55■□□□□ 0.88
SMARCD3-204ENST00000460431 EYA2O00167 538 aa20.55■□□□□ 0.88
SMARCD3-204ENST00000460431 TRAF5O00463 557 aa20.55■□□□□ 0.88
SMARCD3-204ENST00000460431 RLBP1P12271 317 aa20.55■□□□□ 0.88
SMARCD3-204ENST00000460431 HIRAP54198 1017 aaPredicted RBP20.55■□□□□ 0.88
SMARCD3-204ENST00000460431 STRIP1Q5VSL9 837 aa20.55■□□□□ 0.88
SMARCD3-204ENST00000460431 VGLL2Q8N8G2 317 aa20.55■□□□□ 0.88
SMARCD3-204ENST00000460431 GMLQ99445 158 aa20.55■□□□□ 0.88
SMARCD3-204ENST00000460431 PDE8BO95263 885 aa20.54■□□□□ 0.88
SMARCD3-204ENST00000460431 GNAI2P04899 355 aa20.54■□□□□ 0.88
SMARCD3-204ENST00000460431 MTX1Q13505 466 aa20.54■□□□□ 0.88
SMARCD3-204ENST00000460431 METTL24Q5JXM2 366 aa20.54■□□□□ 0.88
SMARCD3-204ENST00000460431 CST9Q5W186 159 aa20.54■□□□□ 0.88
SMARCD3-204ENST00000460431 FBXO3Q9UK99 471 aa20.54■□□□□ 0.88
SMARCD3-204ENST00000460431 RCAN3Q9UKA8 241 aa20.54■□□□□ 0.88
SMARCD3-204ENST00000460431 DACT2Q5SW24 774 aa20.53■□□□□ 0.88
SMARCD3-204ENST00000460431 TTLL5Q6EMB2 1281 aa20.53■□□□□ 0.88
SMARCD3-204ENST00000460431 ATG9AQ7Z3C6 839 aa20.53■□□□□ 0.88
SMARCD3-204ENST00000460431 ZNF804AQ7Z570 1209 aa20.53■□□□□ 0.88
SMARCD3-204ENST00000460431 TRPM4Q8TD43 1214 aa20.53■□□□□ 0.88
SMARCD3-204ENST00000460431 IL1R1P14778 569 aa20.52■□□□□ 0.88
SMARCD3-204ENST00000460431 SAMD7Q7Z3H4 446 aa20.52■□□□□ 0.88
SMARCD3-204ENST00000460431 TNS4Q8IZW8 715 aa20.52■□□□□ 0.88
SMARCD3-204ENST00000460431 ZC3H15Q8WU90 426 aaKnown RBP20.52■□□□□ 0.88
SMARCD3-204ENST00000460431 COPRSQ9NQ92 184 aa20.52■□□□□ 0.88
SMARCD3-204ENST00000460431 ABT1Q9ULW3 272 aaKnown RBP20.52■□□□□ 0.88
SMARCD3-204ENST00000460431 ZBTB7BO15156 539 aaPredicted RBP20.51■□□□□ 0.87
SMARCD3-204ENST00000460431 FOXN1O15353 648 aa20.51■□□□□ 0.87
SMARCD3-204ENST00000460431 CIAO1O76071 339 aa20.51■□□□□ 0.87
SMARCD3-204ENST00000460431 ZNF280AP59817 542 aaPredicted RBP20.51■□□□□ 0.87
SMARCD3-204ENST00000460431 FAM84BQ96KN1 310 aaPredicted RBP20.51■□□□□ 0.87
SMARCD3-204ENST00000460431 GLIS2Q9BZE0 524 aaPredicted RBP20.51■□□□□ 0.87
SMARCD3-204ENST00000460431 SRGAP3O43295 1099 aa20.5■□□□□ 0.87
SMARCD3-204ENST00000460431 EGFRP00533 1210 aa20.5■□□□□ 0.87
SMARCD3-204ENST00000460431 USP17L8P0C7I0 530 aa20.5■□□□□ 0.87
SMARCD3-204ENST00000460431 MS4A1P11836 297 aa20.5■□□□□ 0.87
SMARCD3-204ENST00000460431 GTF2IP78347 998 aa20.5■□□□□ 0.87
SMARCD3-204ENST00000460431 ITPRIPQ8IWB1 547 aa20.5■□□□□ 0.87
SMARCD3-204ENST00000460431 MXD3Q9BW11 206 aa20.5■□□□□ 0.87
SMARCD3-204ENST00000460431 SIL1Q9H173 461 aa20.5■□□□□ 0.87
SMARCD3-204ENST00000460431 WBP1LQ9NX94 342 aa20.5■□□□□ 0.87
SMARCD3-204ENST00000460431 PA2G4Q9UQ80 394 aaKnown RBP20.5■□□□□ 0.87
SMARCD3-204ENST00000460431 MYO3BQ8WXR4 1341 aa20.5■□□□□ 0.87
SMARCD3-204ENST00000460431 WDR33Q9C0J8 1336 aaKnown RBP20.5■□□□□ 0.87
SMARCD3-204ENST00000460431 FGFR2P21802 821 aa20.49■□□□□ 0.87
SMARCD3-204ENST00000460431 HIBADHP31937 336 aaKnown RBP20.49■□□□□ 0.87
SMARCD3-204ENST00000460431 GYG1P46976 350 aa20.49■□□□□ 0.87
SMARCD3-204ENST00000460431 TBC1D10BQ4KMP7 808 aaPredicted RBP20.49■□□□□ 0.87
SMARCD3-204ENST00000460431 FBXO33Q7Z6M2 555 aa20.49■□□□□ 0.87
SMARCD3-204ENST00000460431 PANK1Q8TE04 598 aa20.49■□□□□ 0.87
SMARCD3-204ENST00000460431 FBXW7Q969H0 707 aa20.49■□□□□ 0.87
SMARCD3-204ENST00000460431 SASH1O94885 1247 aa20.48■□□□□ 0.87
SMARCD3-204ENST00000460431 IL15P40933 162 aaPredicted RBP20.48■□□□□ 0.87
SMARCD3-204ENST00000460431 PUM3Q15397 648 aaKnown RBP20.48■□□□□ 0.87
SMARCD3-204ENST00000460431 RBM26Q5T8P6 1007 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms