RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 JDP2Q8WYK2 163 aa15.1■□□□□ 0.01
HDAC4-206ENST00000460235 LNPKQ9C0E8 428 aa15.1■□□□□ 0.01
HDAC4-206ENST00000460235 COA1Q9GZY4 146 aa15.1■□□□□ 0.01
HDAC4-206ENST00000460235 TTC41PQ6P2S7 1318 aa15.1■□□□□ 0.01
HDAC4-206ENST00000460235 SLX4Q8IY92 1834 aa15.09■□□□□ 0.01
HDAC4-206ENST00000460235 TIMM10P62072 90 aa15.09■□□□□ 0.01
HDAC4-206ENST00000460235 TTC39AQ5SRH9 613 aa15.09■□□□□ 0.01
HDAC4-206ENST00000460235 EAF2Q96CJ1 260 aaPredicted RBP15.09■□□□□ 0.01
HDAC4-206ENST00000460235 XAGE2Q96GT9 111 aa15.09■□□□□ 0.01
HDAC4-206ENST00000460235 BCL11AQ9H165 835 aa15.09■□□□□ 0.01
HDAC4-206ENST00000460235 ZBTB22O15209 634 aa15.08■□□□□ 0
HDAC4-206ENST00000460235 PPIP5K2O43314 1243 aa15.08■□□□□ 0
HDAC4-206ENST00000460235 IGSF3O75054 1194 aa15.08■□□□□ 0
HDAC4-206ENST00000460235 KIAA2012Q0VF49 1180 aa15.08■□□□□ 0
HDAC4-206ENST00000460235 PODNQ7Z5L7 613 aa15.08■□□□□ 0
HDAC4-206ENST00000460235 LARGE2Q8N3Y3 721 aa15.08■□□□□ 0
HDAC4-206ENST00000460235 ZNF512BQ96KM6 892 aaPredicted RBP15.08■□□□□ 0
HDAC4-206ENST00000460235 ECHDC1Q9NTX5 307 aa15.08■□□□□ 0
HDAC4-206ENST00000460235 POLLQ9UGP5 575 aa15.08■□□□□ 0
HDAC4-206ENST00000460235 AOX1Q06278 1338 aa15.08■□□□□ 0
HDAC4-206ENST00000460235 LRRC37AA6NMS7 1700 aa15.08■□□□□ 0
HDAC4-206ENST00000460235 KIAA1551Q9HCM1 1747 aa15.07■□□□□ 0
HDAC4-206ENST00000460235 SMARCA5O60264 1052 aaPredicted RBP15.07■□□□□ 0
HDAC4-206ENST00000460235 GLRX3O76003 335 aaKnown RBP15.07■□□□□ 0
HDAC4-206ENST00000460235 MX1P20591 662 aa15.07■□□□□ 0
HDAC4-206ENST00000460235 IARSP41252 1262 aaKnown RBP15.07■□□□□ 0
HDAC4-206ENST00000460235 LRRFIP1Q32MZ4 808 aaKnown RBP15.07■□□□□ 0
HDAC4-206ENST00000460235 NIM1KQ8IY84 436 aa15.07■□□□□ 0
HDAC4-206ENST00000460235 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.07■□□□□ 0
HDAC4-206ENST00000460235 CCDC8Q9H0W5 538 aaPredicted RBP15.07■□□□□ 0
HDAC4-206ENST00000460235 DENND2AQ9ULE3 1009 aa15.07■□□□□ 0
HDAC4-206ENST00000460235 ZNF609O15014 1411 aa15.07■□□□□ 0
HDAC4-206ENST00000460235 TAF1P21675 1872 aa15.06■□□□□ 0
HDAC4-206ENST00000460235 BRCA1P38398 1863 aaKnown RBP15.06■□□□□ 0
HDAC4-206ENST00000460235 LMNB1P20700 586 aa15.06■□□□□ 0
HDAC4-206ENST00000460235 CCDC102BQ68D86 513 aa15.06■□□□□ 0
HDAC4-206ENST00000460235 FBXO33Q7Z6M2 555 aa15.06■□□□□ 0
HDAC4-206ENST00000460235 ZGPATQ8N5A5 531 aaKnown RBP15.06■□□□□ 0
HDAC4-206ENST00000460235 WWC3Q9ULE0 1092 aa15.06■□□□□ 0
HDAC4-206ENST00000460235 SPEF2Q9C093 1822 aa15.06■□□□□ 0
HDAC4-206ENST00000460235 ARFGEF1Q9Y6D6 1849 aa15.06■□□□□ 0
HDAC4-206ENST00000460235 RIMBP2O15034 1052 aa15.05■□□□□ -0
HDAC4-206ENST00000460235 ATP5JP18859 108 aa15.05■□□□□ -0
HDAC4-206ENST00000460235 TTF1Q15361 905 aaPredicted RBP15.05■□□□□ -0
HDAC4-206ENST00000460235 TBC1D22AQ8WUA7 517 aa15.05■□□□□ -0
HDAC4-206ENST00000460235 FAM84BQ96KN1 310 aaPredicted RBP15.05■□□□□ -0
HDAC4-206ENST00000460235 DBNDD2Q9BQY9 259 aa15.05■□□□□ -0
HDAC4-206ENST00000460235 STAP2Q9UGK3 403 aa15.05■□□□□ -0
HDAC4-206ENST00000460235 DBNLQ9UJU6 430 aaKnown RBP15.05■□□□□ -0
HDAC4-206ENST00000460235 CACNA1SQ13698 1873 aa15.04■□□□□ -0
HDAC4-206ENST00000460235 PDS5AQ29RF7 1337 aaKnown RBP15.04■□□□□ -0
HDAC4-206ENST00000460235 TMED8Q6PL24 325 aaPredicted RBP15.04■□□□□ -0
HDAC4-206ENST00000460235 OLFM4Q6UX06 510 aa15.04■□□□□ -0
HDAC4-206ENST00000460235 TICAM2Q86XR7 235 aa15.04■□□□□ -0
HDAC4-206ENST00000460235 WDR66Q8TBY9 1149 aa15.04■□□□□ -0
HDAC4-206ENST00000460235 OSBPL3Q9H4L5 887 aa15.04■□□□□ -0
HDAC4-206ENST00000460235 CD209Q9NNX6 404 aa15.04■□□□□ -0
HDAC4-206ENST00000460235 NFKBIEO00221 500 aa15.03■□□□□ -0
HDAC4-206ENST00000460235 IL1R1P14778 569 aa15.03■□□□□ -0
HDAC4-206ENST00000460235 ARID4AP29374 1257 aaPredicted RBP15.03■□□□□ -0
HDAC4-206ENST00000460235 GYG1P46976 350 aa15.03■□□□□ -0
HDAC4-206ENST00000460235 MMP14P50281 582 aa15.03■□□□□ -0
HDAC4-206ENST00000460235 BCAMP50895 628 aa15.03■□□□□ -0
HDAC4-206ENST00000460235 PDE1AP54750 535 aa15.03■□□□□ -0
HDAC4-206ENST00000460235 EIF6P56537 245 aaKnown RBP15.03■□□□□ -0
HDAC4-206ENST00000460235 TNIP1Q15025 636 aa15.03■□□□□ -0
HDAC4-206ENST00000460235 AOC3Q16853 763 aa15.03■□□□□ -0
HDAC4-206ENST00000460235 SPTY2D1Q68D10 685 aaPredicted RBP15.03■□□□□ -0
HDAC4-206ENST00000460235 ZNF277Q9NRM2 450 aaPredicted RBP15.03■□□□□ -0
HDAC4-206ENST00000460235 ZNRF3Q9ULT6 936 aa15.03■□□□□ -0
HDAC4-206ENST00000460235 ZC3H4Q9UPT8 1303 aaKnown RBP15.02■□□□□ -0
HDAC4-206ENST00000460235 YBX3P16989 372 aaKnown RBP eCLIP15.02■□□□□ -0
HDAC4-206ENST00000460235 TDRD7Q8NHU6 1098 aaKnown RBP15.02■□□□□ -0
HDAC4-206ENST00000460235 SNED1Q8TER0 1413 aa15.01□□□□□ -0.01
HDAC4-206ENST00000460235 MYO3BQ8WXR4 1341 aa15.01□□□□□ -0.01
HDAC4-206ENST00000460235 ECE2O60344 883 aa15.01□□□□□ -0.01
HDAC4-206ENST00000460235 ADORA1P30542 326 aa15.01□□□□□ -0.01
HDAC4-206ENST00000460235 PHKA1P46020 1223 aa15.01□□□□□ -0.01
HDAC4-206ENST00000460235 PLEKHM2Q8IWE5 1019 aa15.01□□□□□ -0.01
HDAC4-206ENST00000460235 SPATA5Q8NB90 893 aa15.01□□□□□ -0.01
HDAC4-206ENST00000460235 SUGT1Q9Y2Z0 365 aa15.01□□□□□ -0.01
HDAC4-206ENST00000460235 USP17L3A6NCW0 530 aa15□□□□□ -0.01
HDAC4-206ENST00000460235 USP17L4A6NCW7 530 aa15□□□□□ -0.01
HDAC4-206ENST00000460235 SNAP23O00161 211 aa15□□□□□ -0.01
HDAC4-206ENST00000460235 EIF5BO60841 1220 aaKnown RBP15□□□□□ -0.01
HDAC4-206ENST00000460235 FKBP1AP62942 108 aaKnown RBP15□□□□□ -0.01
HDAC4-206ENST00000460235 DOK7Q18PE1 504 aa15□□□□□ -0.01
HDAC4-206ENST00000460235 STRIP1Q5VSL9 837 aa15□□□□□ -0.01
HDAC4-206ENST00000460235 TTLL5Q6EMB2 1281 aa15□□□□□ -0.01
HDAC4-206ENST00000460235 ZSCAN25Q6NSZ9 544 aa15□□□□□ -0.01
HDAC4-206ENST00000460235 DPY19L2Q6NUT2 758 aa15□□□□□ -0.01
HDAC4-206ENST00000460235 USP17L1Q7RTZ2 530 aa15□□□□□ -0.01
HDAC4-206ENST00000460235 SLF2Q8IX21 1173 aa15□□□□□ -0.01
HDAC4-206ENST00000460235 C16orf71Q8IYS4 520 aaPredicted RBP15□□□□□ -0.01
HDAC4-206ENST00000460235 CNTROBQ8N137 903 aa15□□□□□ -0.01
HDAC4-206ENST00000460235 HAUS7Q99871 368 aa15□□□□□ -0.01
HDAC4-206ENST00000460235 DDX24Q9GZR7 859 aaKnown RBP eCLIP15□□□□□ -0.01
HDAC4-206ENST00000460235 COL4A1P02462 1669 aa15□□□□□ -0.01
HDAC4-206ENST00000460235 MAST3O60307 1309 aa14.99□□□□□ -0.01
HDAC4-206ENST00000460235 FAM205AQ6ZU69 1335 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms