RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 SULF1Q8IWU6 871 aa12.61□□□□□ -0.39
SYN3-205ENST00000459990 CDC5LQ99459 802 aaKnown RBP12.61□□□□□ -0.39
SYN3-205ENST00000459990 BSDC1Q9NW68 430 aaPredicted RBP12.61□□□□□ -0.39
SYN3-205ENST00000459990 IRS2Q9Y4H2 1338 aa12.61□□□□□ -0.39
SYN3-205ENST00000459990 OTOFQ9HC10 1997 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 USP17L3A6NCW0 530 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 USP17L4A6NCW7 530 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 CCDC85CA6NKD9 419 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 G3V3G9 751 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 USP17L8P0C7I0 530 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 CCT4P50991 539 aaKnown RBP12.6□□□□□ -0.39
SYN3-205ENST00000459990 ZNF157P51786 506 aaPredicted RBP12.6□□□□□ -0.39
SYN3-205ENST00000459990 KIF23Q02241 960 aaPredicted RBP12.6□□□□□ -0.39
SYN3-205ENST00000459990 FLIIQ13045 1269 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 GCKRQ14397 625 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 NBPF9Q3BBW0 867 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 DCAF8Q5TAQ9 597 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 PRAMEF18Q5VWM3 479 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 USP17L1Q7RTZ2 530 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 C2orf69Q8N8R5 385 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 STK31Q9BXU1 1019 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 IL16Q14005 1332 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 PITPNM2Q9BZ72 1349 aa12.6□□□□□ -0.39
SYN3-205ENST00000459990 SNAP23O00161 211 aa12.59□□□□□ -0.39
SYN3-205ENST00000459990 ITGA6P23229 1130 aa12.59□□□□□ -0.39
SYN3-205ENST00000459990 PODNQ7Z5L7 613 aa12.59□□□□□ -0.39
SYN3-205ENST00000459990 PLA2G12BQ9BX93 195 aa12.59□□□□□ -0.39
SYN3-205ENST00000459990 SPINK5Q9NQ38 1064 aaPredicted RBP12.59□□□□□ -0.39
SYN3-205ENST00000459990 SSC5DA1L4H1 1573 aa12.59□□□□□ -0.39
SYN3-205ENST00000459990 HTTP42858 3142 aa12.58□□□□□ -0.4
SYN3-205ENST00000459990 SASH1O94885 1247 aa12.58□□□□□ -0.4
SYN3-205ENST00000459990 NEXNQ0ZGT2 675 aa12.58□□□□□ -0.4
SYN3-205ENST00000459990 DGKZQ13574 1117 aa12.58□□□□□ -0.4
SYN3-205ENST00000459990 CSRNP1Q96S65 589 aa12.58□□□□□ -0.4
SYN3-205ENST00000459990 RNF186Q9NXI6 227 aa12.58□□□□□ -0.4
SYN3-205ENST00000459990 SAGE1Q9NXZ1 904 aa12.58□□□□□ -0.4
SYN3-205ENST00000459990 WNT10BO00744 389 aa12.57□□□□□ -0.4
SYN3-205ENST00000459990 VAMP4O75379 141 aa12.57□□□□□ -0.4
SYN3-205ENST00000459990 CSF1RP07333 972 aa12.57□□□□□ -0.4
SYN3-205ENST00000459990 RGS19P49795 217 aa12.57□□□□□ -0.4
SYN3-205ENST00000459990 FKBP5Q13451 457 aaPredicted RBP12.57□□□□□ -0.4
SYN3-205ENST00000459990 DNAAF4Q8WXU2 420 aa12.57□□□□□ -0.4
SYN3-205ENST00000459990 CCDC102AQ96A19 550 aa12.57□□□□□ -0.4
SYN3-205ENST00000459990 COA1Q9GZY4 146 aa12.57□□□□□ -0.4
SYN3-205ENST00000459990 ZNF804BA4D1E1 1349 aa12.57□□□□□ -0.4
SYN3-205ENST00000459990 F6X3S4 739 aa12.56□□□□□ -0.4
SYN3-205ENST00000459990 TRPA1O75762 1119 aa12.56□□□□□ -0.4
SYN3-205ENST00000459990 IGHMBP2P38935 993 aaKnown RBP12.56□□□□□ -0.4
SYN3-205ENST00000459990 EXOSC9Q06265 439 aaKnown RBP12.56□□□□□ -0.4
SYN3-205ENST00000459990 CHRNDQ07001 517 aa12.56□□□□□ -0.4
SYN3-205ENST00000459990 STRIP1Q5VSL9 837 aa12.56□□□□□ -0.4
SYN3-205ENST00000459990 LINS1Q8NG48 757 aa12.56□□□□□ -0.4
SYN3-205ENST00000459990 FBXW7Q969H0 707 aa12.56□□□□□ -0.4
SYN3-205ENST00000459990 SALL2Q9Y467 1007 aaPredicted RBP12.56□□□□□ -0.4
SYN3-205ENST00000459990 PCDHAC2Q9Y5I4 1007 aa12.56□□□□□ -0.4
SYN3-205ENST00000459990 FOXO4P98177 505 aa12.55□□□□□ -0.4
SYN3-205ENST00000459990 NCBP3Q53F19 620 aaKnown RBP12.55□□□□□ -0.4
SYN3-205ENST00000459990 EPHA10Q5JZY3 1008 aa12.55□□□□□ -0.4
SYN3-205ENST00000459990 CERS5Q8N5B7 392 aa12.55□□□□□ -0.4
SYN3-205ENST00000459990 ZBED3Q96IU2 234 aaPredicted RBP12.55□□□□□ -0.4
SYN3-205ENST00000459990 CHMP4AQ9BY43 222 aa12.55□□□□□ -0.4
SYN3-205ENST00000459990 MRS2Q9HD23 443 aa12.55□□□□□ -0.4
SYN3-205ENST00000459990 FZD1Q9UP38 647 aa12.55□□□□□ -0.4
SYN3-205ENST00000459990 LEMD3Q9Y2U8 911 aa12.55□□□□□ -0.4
SYN3-205ENST00000459990 AOX1Q06278 1338 aa12.55□□□□□ -0.4
SYN3-205ENST00000459990 MYO3BQ8WXR4 1341 aa12.55□□□□□ -0.4
SYN3-205ENST00000459990 UBE2Q2LH0YL09 131 aa12.54□□□□□ -0.4
SYN3-205ENST00000459990 TAF5LO75529 589 aa12.54□□□□□ -0.4
SYN3-205ENST00000459990 FKBP1BP68106 108 aa12.54□□□□□ -0.4
SYN3-205ENST00000459990 BEND3Q5T5X7 828 aa12.54□□□□□ -0.4
SYN3-205ENST00000459990 KIAA0825Q8IV33 1275 aa12.54□□□□□ -0.4
SYN3-205ENST00000459990 GTF2IP78347 998 aa12.53□□□□□ -0.4
SYN3-205ENST00000459990 MLLT1Q03111 559 aaPredicted RBP12.53□□□□□ -0.4
SYN3-205ENST00000459990 TTLL5Q6EMB2 1281 aa12.53□□□□□ -0.4
SYN3-205ENST00000459990 HELBQ8NG08 1087 aaPredicted RBP12.53□□□□□ -0.4
SYN3-205ENST00000459990 MPHOSPH8Q99549 860 aa12.53□□□□□ -0.4
SYN3-205ENST00000459990 MYH16Q9H6N6 1097 aa12.53□□□□□ -0.4
SYN3-205ENST00000459990 CD209Q9NNX6 404 aa12.53□□□□□ -0.4
SYN3-205ENST00000459990 COL1A1P02452 1464 aaPredicted RBP12.53□□□□□ -0.4
SYN3-205ENST00000459990 CENPFP49454 3210 aa12.52□□□□□ -0.41
SYN3-205ENST00000459990 ANKRD2Q9GZV1 360 aa12.52□□□□□ -0.41
SYN3-205ENST00000459990 MYH13Q9UKX3 1938 aa12.51□□□□□ -0.41
SYN3-205ENST00000459990 ANKRD18BA2A2Z9 1011 aa12.51□□□□□ -0.41
SYN3-205ENST00000459990 MKRN3Q13064 507 aaKnown RBP12.51□□□□□ -0.41
SYN3-205ENST00000459990 C15orf52Q6ZUT6 534 aaKnown RBP12.51□□□□□ -0.41
SYN3-205ENST00000459990 WDR63Q8IWG1 891 aa12.51□□□□□ -0.41
SYN3-205ENST00000459990 OGFOD1Q8N543 542 aa12.51□□□□□ -0.41
SYN3-205ENST00000459990 ZNF594Q96JF6 807 aaPredicted RBP12.51□□□□□ -0.41
SYN3-205ENST00000459990 JAG2Q9Y219 1238 aa12.51□□□□□ -0.41
SYN3-205ENST00000459990 BRCA2P51587 3418 aa12.5□□□□□ -0.41
SYN3-205ENST00000459990 TBC1D8O95759 1140 aa12.5□□□□□ -0.41
SYN3-205ENST00000459990 SOX10P56693 466 aa12.5□□□□□ -0.41
SYN3-205ENST00000459990 PTPN12Q05209 780 aaKnown RBP12.5□□□□□ -0.41
SYN3-205ENST00000459990 PRKG1Q13976 671 aa12.5□□□□□ -0.41
SYN3-205ENST00000459990 LMBR1LQ6UX01 489 aa12.5□□□□□ -0.41
SYN3-205ENST00000459990 KAZALD1Q96I82 304 aa12.5□□□□□ -0.41
SYN3-205ENST00000459990 R3HDMLQ9H3Y0 253 aa12.5□□□□□ -0.41
SYN3-205ENST00000459990 PDE4DIPQ5VU43 2346 aa12.49□□□□□ -0.41
SYN3-205ENST00000459990 ZNF521Q96K83 1311 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms