RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 DACT2Q5SW24 774 aa15.84■□□□□ 0.13
GPNMB-204ENST00000459927 TXNRD3Q86VQ6 643 aa15.84■□□□□ 0.13
GPNMB-204ENST00000459927 TSR2Q969E8 191 aaKnown RBP15.84■□□□□ 0.13
GPNMB-204ENST00000459927 MXD3Q9BW11 206 aa15.84■□□□□ 0.13
GPNMB-204ENST00000459927 STK31Q9BXU1 1019 aa15.84■□□□□ 0.13
GPNMB-204ENST00000459927 SCAF8Q9UPN6 1271 aaKnown RBP15.84■□□□□ 0.13
GPNMB-204ENST00000459927 PITPNM2Q9BZ72 1349 aa15.84■□□□□ 0.13
GPNMB-204ENST00000459927 CCDC27Q2M243 656 aa15.83■□□□□ 0.12
GPNMB-204ENST00000459927 CCDC184Q52MB2 194 aa15.83■□□□□ 0.12
GPNMB-204ENST00000459927 PRAMEF18Q5VWM3 479 aa15.83■□□□□ 0.12
GPNMB-204ENST00000459927 MOB2Q70IA6 237 aa15.83■□□□□ 0.12
GPNMB-204ENST00000459927 WWC1Q8IX03 1113 aa15.83■□□□□ 0.12
GPNMB-204ENST00000459927 COA1Q9GZY4 146 aa15.83■□□□□ 0.12
GPNMB-204ENST00000459927 LEMD3Q9Y2U8 911 aa15.83■□□□□ 0.12
GPNMB-204ENST00000459927 ZNF609O15014 1411 aa15.83■□□□□ 0.12
GPNMB-204ENST00000459927 UBE2Q2LH0YL09 131 aa15.82■□□□□ 0.12
GPNMB-204ENST00000459927 CSF1RP07333 972 aa15.82■□□□□ 0.12
GPNMB-204ENST00000459927 TWISTNBQ3B726 338 aaPredicted RBP15.82■□□□□ 0.12
GPNMB-204ENST00000459927 STRIP1Q5VSL9 837 aa15.82■□□□□ 0.12
GPNMB-204ENST00000459927 OGFOD1Q8N543 542 aa15.82■□□□□ 0.12
GPNMB-204ENST00000459927 PLA2G12BQ9BX93 195 aa15.82■□□□□ 0.12
GPNMB-204ENST00000459927 WNT10BO00744 389 aa15.81■□□□□ 0.12
GPNMB-204ENST00000459927 MMP14P50281 582 aa15.81■□□□□ 0.12
GPNMB-204ENST00000459927 GCKRQ14397 625 aa15.81■□□□□ 0.12
GPNMB-204ENST00000459927 TTLL5Q6EMB2 1281 aa15.81■□□□□ 0.12
GPNMB-204ENST00000459927 UBE3BQ7Z3V4 1068 aa15.81■□□□□ 0.12
GPNMB-204ENST00000459927 RASAL3Q86YV0 1011 aa15.81■□□□□ 0.12
GPNMB-204ENST00000459927 AKAP11Q9UKA4 1901 aa15.8■□□□□ 0.12
GPNMB-204ENST00000459927 MED23Q9ULK4 1368 aa15.8■□□□□ 0.12
GPNMB-204ENST00000459927 IGHMBP2P38935 993 aaKnown RBP15.8■□□□□ 0.12
GPNMB-204ENST00000459927 CASP7P55210 303 aa15.8■□□□□ 0.12
GPNMB-204ENST00000459927 ANKRD2Q9GZV1 360 aa15.8■□□□□ 0.12
GPNMB-204ENST00000459927 ZNF804BA4D1E1 1349 aa15.79■□□□□ 0.12
GPNMB-204ENST00000459927 ITGA6P23229 1130 aa15.79■□□□□ 0.12
GPNMB-204ENST00000459927 TM4SF4P48230 202 aa15.79■□□□□ 0.12
GPNMB-204ENST00000459927 NCBP3Q53F19 620 aaKnown RBP15.79■□□□□ 0.12
GPNMB-204ENST00000459927 MYO3BQ8WXR4 1341 aa15.78■□□□□ 0.12
GPNMB-204ENST00000459927 VAMP4O75379 141 aa15.78■□□□□ 0.12
GPNMB-204ENST00000459927 FBXW7Q969H0 707 aa15.78■□□□□ 0.12
GPNMB-204ENST00000459927 MPHOSPH8Q99549 860 aa15.78■□□□□ 0.12
GPNMB-204ENST00000459927 PSME4Q14997 1843 aa15.78■□□□□ 0.12
GPNMB-204ENST00000459927 IL16Q14005 1332 aa15.77■□□□□ 0.12
GPNMB-204ENST00000459927 TBC1D8O95759 1140 aa15.77■□□□□ 0.12
GPNMB-204ENST00000459927 GTF2IP78347 998 aa15.77■□□□□ 0.12
GPNMB-204ENST00000459927 FLIIQ13045 1269 aa15.77■□□□□ 0.12
GPNMB-204ENST00000459927 TTLL12Q14166 644 aaPredicted RBP15.77■□□□□ 0.12
GPNMB-204ENST00000459927 CTU1Q7Z7A3 348 aaKnown RBP15.77■□□□□ 0.12
GPNMB-204ENST00000459927 LINS1Q8NG48 757 aa15.77■□□□□ 0.12
GPNMB-204ENST00000459927 DNAAF4Q8WXU2 420 aa15.77■□□□□ 0.12
GPNMB-204ENST00000459927 ZBED3Q96IU2 234 aaPredicted RBP15.77■□□□□ 0.12
GPNMB-204ENST00000459927 SLC34A2O95436 690 aa15.76■□□□□ 0.11
GPNMB-204ENST00000459927 KLRK1P26718 216 aa15.76■□□□□ 0.11
GPNMB-204ENST00000459927 PTPN12Q05209 780 aaKnown RBP15.76■□□□□ 0.11
GPNMB-204ENST00000459927 CHRNDQ07001 517 aa15.76■□□□□ 0.11
GPNMB-204ENST00000459927 KIAA0825Q8IV33 1275 aa15.76■□□□□ 0.11
GPNMB-204ENST00000459927 CD209Q9NNX6 404 aa15.76■□□□□ 0.11
GPNMB-204ENST00000459927 NF2P35240 595 aa15.75■□□□□ 0.11
GPNMB-204ENST00000459927 FKBP5Q13451 457 aaPredicted RBP15.75■□□□□ 0.11
GPNMB-204ENST00000459927 MYH16Q9H6N6 1097 aa15.75■□□□□ 0.11
GPNMB-204ENST00000459927 HDAC9Q9UKV0 1011 aa15.75■□□□□ 0.11
GPNMB-204ENST00000459927 ANKRD18BA2A2Z9 1011 aa15.74■□□□□ 0.11
GPNMB-204ENST00000459927 SNAP23O00161 211 aa15.74■□□□□ 0.11
GPNMB-204ENST00000459927 TAF5LO75529 589 aa15.74■□□□□ 0.11
GPNMB-204ENST00000459927 SASH1O94885 1247 aa15.74■□□□□ 0.11
GPNMB-204ENST00000459927 FOXO4P98177 505 aa15.74■□□□□ 0.11
GPNMB-204ENST00000459927 LDLRAD1Q5T700 205 aa15.74■□□□□ 0.11
GPNMB-204ENST00000459927 ARMC9Q7Z3E5 817 aa15.74■□□□□ 0.11
GPNMB-204ENST00000459927 HELBQ8NG08 1087 aaPredicted RBP15.74■□□□□ 0.11
GPNMB-204ENST00000459927 ZNF296Q8WUU4 475 aaPredicted RBP15.74■□□□□ 0.11
GPNMB-204ENST00000459927 MYH3P11055 1940 aa15.74■□□□□ 0.11
GPNMB-204ENST00000459927 KCNJ4P48050 445 aa15.73■□□□□ 0.11
GPNMB-204ENST00000459927 PRKG1Q13976 671 aa15.73■□□□□ 0.11
GPNMB-204ENST00000459927 PKN2Q16513 984 aaKnown RBP15.73■□□□□ 0.11
GPNMB-204ENST00000459927 C15orf52Q6ZUT6 534 aaKnown RBP15.73■□□□□ 0.11
GPNMB-204ENST00000459927 WDR63Q8IWG1 891 aa15.73■□□□□ 0.11
GPNMB-204ENST00000459927 IRS2Q9Y4H2 1338 aa15.72■□□□□ 0.11
GPNMB-204ENST00000459927 GPR25O00155 361 aa15.72■□□□□ 0.11
GPNMB-204ENST00000459927 SOX10P56693 466 aa15.72■□□□□ 0.11
GPNMB-204ENST00000459927 EXOSC9Q06265 439 aaKnown RBP15.72■□□□□ 0.11
GPNMB-204ENST00000459927 MKRN3Q13064 507 aaKnown RBP15.72■□□□□ 0.11
GPNMB-204ENST00000459927 IFIT5Q13325 482 aaKnown RBP15.72■□□□□ 0.11
GPNMB-204ENST00000459927 DLGAP5Q15398 846 aa15.72■□□□□ 0.11
GPNMB-204ENST00000459927 NOM1Q5C9Z4 860 aaKnown RBP15.72■□□□□ 0.11
GPNMB-204ENST00000459927 APOBEC3FQ8IUX4 373 aaKnown RBP15.72■□□□□ 0.11
GPNMB-204ENST00000459927 MTMR14Q8NCE2 650 aa15.72■□□□□ 0.11
GPNMB-204ENST00000459927 DEFB129Q9H1M3 183 aa15.72■□□□□ 0.11
GPNMB-204ENST00000459927 SALL2Q9Y467 1007 aaPredicted RBP15.72■□□□□ 0.11
GPNMB-204ENST00000459927 PAPPA2Q9BXP8 1791 aa15.72■□□□□ 0.11
GPNMB-204ENST00000459927 IL1R1P14778 569 aa15.71■□□□□ 0.11
GPNMB-204ENST00000459927 BEND3Q5T5X7 828 aa15.71■□□□□ 0.11
GPNMB-204ENST00000459927 CERS5Q8N5B7 392 aa15.71■□□□□ 0.11
GPNMB-204ENST00000459927 SLC10A4Q96EP9 437 aa15.71■□□□□ 0.11
GPNMB-204ENST00000459927 R3HDMLQ9H3Y0 253 aa15.71■□□□□ 0.11
GPNMB-204ENST00000459927 ANGEL1Q9UNK9 670 aaKnown RBP15.71■□□□□ 0.11
GPNMB-204ENST00000459927 HPS5Q9UPZ3 1129 aa15.71■□□□□ 0.11
GPNMB-204ENST00000459927 F6X3S4 739 aa15.7■□□□□ 0.1
GPNMB-204ENST00000459927 INHBEP58166 350 aa15.7■□□□□ 0.1
GPNMB-204ENST00000459927 SPRYD7Q5W111 196 aa15.7■□□□□ 0.1
GPNMB-204ENST00000459927 PRMT6Q96LA8 375 aaPredicted RBP15.7■□□□□ 0.1
GPNMB-204ENST00000459927 CFHR5Q9BXR6 569 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms