RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 CHMP4BQ9H444 224 aaKnown RBP20.13■□□□□ 0.81
CD28-203ENST00000458610 ADARB2Q9NS39 739 aaKnown RBP20.13■□□□□ 0.81
CD28-203ENST00000458610 SCN4AP35499 1836 aa20.13■□□□□ 0.81
CD28-203ENST00000458610 EPS15P42566 896 aa20.12■□□□□ 0.81
CD28-203ENST00000458610 RFX5P48382 616 aaPredicted RBP20.12■□□□□ 0.81
CD28-203ENST00000458610 AGBL3Q8NEM8 1001 aa20.12■□□□□ 0.81
CD28-203ENST00000458610 YTHDC1Q96MU7 727 aaKnown RBP20.12■□□□□ 0.81
CD28-203ENST00000458610 CNOT7Q9UIV1 285 aaKnown RBP20.12■□□□□ 0.81
CD28-203ENST00000458610 WTIPA6NIX2 430 aaPredicted RBP20.11■□□□□ 0.81
CD28-203ENST00000458610 CIAO1O76071 339 aa20.11■□□□□ 0.81
CD28-203ENST00000458610 PDE8BO95263 885 aa20.11■□□□□ 0.81
CD28-203ENST00000458610 HSPA6P17066 643 aa20.11■□□□□ 0.81
CD28-203ENST00000458610 PTPN12Q05209 780 aaKnown RBP20.11■□□□□ 0.81
CD28-203ENST00000458610 MTX1Q13505 466 aa20.11■□□□□ 0.81
CD28-203ENST00000458610 LRRC24Q50LG9 513 aa20.11■□□□□ 0.81
CD28-203ENST00000458610 KCNQ5Q9NR82 932 aa20.11■□□□□ 0.81
CD28-203ENST00000458610 SRGAP3O43295 1099 aa20.1■□□□□ 0.81
CD28-203ENST00000458610 MMP14P50281 582 aa20.1■□□□□ 0.81
CD28-203ENST00000458610 STRIP1Q5VSL9 837 aa20.1■□□□□ 0.81
CD28-203ENST00000458610 RSBN1LQ6PCB5 846 aaPredicted RBP20.1■□□□□ 0.81
CD28-203ENST00000458610 TXNRD3Q86VQ6 643 aa20.1■□□□□ 0.81
CD28-203ENST00000458610 KLHDC4Q8TBB5 520 aa20.1■□□□□ 0.81
CD28-203ENST00000458610 CD209Q9NNX6 404 aa20.1■□□□□ 0.81
CD28-203ENST00000458610 COPRSQ9NQ92 184 aa20.1■□□□□ 0.81
CD28-203ENST00000458610 ZBTB12Q9Y330 459 aaPredicted RBP20.1■□□□□ 0.81
CD28-203ENST00000458610 MYO3BQ8WXR4 1341 aa20.09■□□□□ 0.81
CD28-203ENST00000458610 ZBTB7BO15156 539 aaPredicted RBP20.09■□□□□ 0.81
CD28-203ENST00000458610 IL15P40933 162 aaPredicted RBP20.09■□□□□ 0.81
CD28-203ENST00000458610 CAVIN4Q5BKX8 364 aa20.09■□□□□ 0.81
CD28-203ENST00000458610 TTLL5Q6EMB2 1281 aa20.09■□□□□ 0.81
CD28-203ENST00000458610 CEP126Q9P2H0 1117 aa20.09■□□□□ 0.81
CD28-203ENST00000458610 SPEF2Q9C093 1822 aa20.09■□□□□ 0.81
CD28-203ENST00000458610 IFIT1P09914 478 aaKnown RBP20.08■□□□□ 0.81
CD28-203ENST00000458610 RLBP1P12271 317 aa20.08■□□□□ 0.81
CD28-203ENST00000458610 HIBADHP31937 336 aaKnown RBP20.08■□□□□ 0.81
CD28-203ENST00000458610 APLP1P51693 650 aa20.08■□□□□ 0.81
CD28-203ENST00000458610 VPS37DQ86XT2 251 aa20.08■□□□□ 0.81
CD28-203ENST00000458610 MICALL2Q8IY33 904 aa20.08■□□□□ 0.81
CD28-203ENST00000458610 FBXW7Q969H0 707 aa20.08■□□□□ 0.81
CD28-203ENST00000458610 SNAP23O00161 211 aa20.07■□□□□ 0.8
CD28-203ENST00000458610 IL1R1P14778 569 aa20.07■□□□□ 0.8
CD28-203ENST00000458610 KLRK1P26718 216 aa20.07■□□□□ 0.8
CD28-203ENST00000458610 PUM3Q15397 648 aaKnown RBP20.07■□□□□ 0.8
CD28-203ENST00000458610 PANK1Q8TE04 598 aa20.07■□□□□ 0.8
CD28-203ENST00000458610 ZC3H15Q8WU90 426 aaKnown RBP20.07■□□□□ 0.8
CD28-203ENST00000458610 SIL1Q9H173 461 aa20.07■□□□□ 0.8
CD28-203ENST00000458610 DDX19BQ9UMR2 479 aa20.07■□□□□ 0.8
CD28-203ENST00000458610 USP17L8P0C7I0 530 aa20.06■□□□□ 0.8
CD28-203ENST00000458610 PDE3AQ14432 1141 aa20.06■□□□□ 0.8
CD28-203ENST00000458610 OGFOD1Q8N543 542 aa20.06■□□□□ 0.8
CD28-203ENST00000458610 IRS2Q9Y4H2 1338 aa20.05■□□□□ 0.8
CD28-203ENST00000458610 SASH1O94885 1247 aa20.05■□□□□ 0.8
CD28-203ENST00000458610 POTEIP0CG38 1075 aa20.05■□□□□ 0.8
CD28-203ENST00000458610 POTEJP0CG39 1038 aa20.05■□□□□ 0.8
CD28-203ENST00000458610 SLC5A1P13866 664 aa20.05■□□□□ 0.8
CD28-203ENST00000458610 GTF2IP78347 998 aa20.05■□□□□ 0.8
CD28-203ENST00000458610 ATP8B2P98198 1209 aa20.05■□□□□ 0.8
CD28-203ENST00000458610 DACT2Q5SW24 774 aa20.05■□□□□ 0.8
CD28-203ENST00000458610 ATG9AQ7Z3C6 839 aa20.05■□□□□ 0.8
CD28-203ENST00000458610 VGLL2Q8N8G2 317 aa20.05■□□□□ 0.8
CD28-203ENST00000458610 LPIN2Q92539 896 aa20.05■□□□□ 0.8
CD28-203ENST00000458610 ZNF609O15014 1411 aa20.04■□□□□ 0.8
CD28-203ENST00000458610 G3BP1Q13283 466 aaKnown RBP eCLIP20.04■□□□□ 0.8
CD28-203ENST00000458610 MVPQ14764 893 aaKnown RBP20.04■□□□□ 0.8
CD28-203ENST00000458610 CNTROBQ8N137 903 aa20.04■□□□□ 0.8
CD28-203ENST00000458610 FAM84BQ96KN1 310 aaPredicted RBP20.04■□□□□ 0.8
CD28-203ENST00000458610 HDAC9Q9UKV0 1011 aa20.04■□□□□ 0.8
CD28-203ENST00000458610 GYG1P46976 350 aa20.03■□□□□ 0.8
CD28-203ENST00000458610 FKBP1AP62942 108 aaKnown RBP20.03■□□□□ 0.8
CD28-203ENST00000458610 TDRD7Q8NHU6 1098 aaKnown RBP20.03■□□□□ 0.8
CD28-203ENST00000458610 GMLQ99445 158 aa20.03■□□□□ 0.8
CD28-203ENST00000458610 PA2G4Q9UQ80 394 aaKnown RBP20.03■□□□□ 0.8
CD28-203ENST00000458610 AKAP2Q9Y2D5 859 aa20.03■□□□□ 0.8
CD28-203ENST00000458610 FRAT2O75474 233 aaPredicted RBP20.02■□□□□ 0.8
CD28-203ENST00000458610 FGFR2P21802 821 aa20.02■□□□□ 0.8
CD28-203ENST00000458610 ZNF280AP59817 542 aaPredicted RBP20.02■□□□□ 0.8
CD28-203ENST00000458610 RBM26Q5T8P6 1007 aaKnown RBP20.02■□□□□ 0.8
CD28-203ENST00000458610 FBXO33Q7Z6M2 555 aa20.02■□□□□ 0.8
CD28-203ENST00000458610 PGAP2Q9UHJ9 254 aa20.02■□□□□ 0.8
CD28-203ENST00000458610 ATP2B3Q16720 1220 aa20.01■□□□□ 0.79
CD28-203ENST00000458610 KIF4BQ2VIQ3 1234 aa20.01■□□□□ 0.79
CD28-203ENST00000458610 TBC1D10BQ4KMP7 808 aaPredicted RBP20.01■□□□□ 0.79
CD28-203ENST00000458610 MAP1SQ66K74 1059 aaPredicted RBP20.01■□□□□ 0.79
CD28-203ENST00000458610 SAMD7Q7Z3H4 446 aa20.01■□□□□ 0.79
CD28-203ENST00000458610 GNL3LQ9NVN8 582 aaKnown RBP20.01■□□□□ 0.79
CD28-203ENST00000458610 COG6Q9Y2V7 657 aa20.01■□□□□ 0.79
CD28-203ENST00000458610 PNMA6EA0A0J9YXQ4 647 aa20■□□□□ 0.79
CD28-203ENST00000458610 ITGBL1O95965 494 aaPredicted RBP20■□□□□ 0.79
CD28-203ENST00000458610 POLA2Q14181 598 aa20■□□□□ 0.79
CD28-203ENST00000458610 SSH3Q8TE77 659 aa20■□□□□ 0.79
CD28-203ENST00000458610 FAM205AQ6ZU69 1335 aa20■□□□□ 0.79
CD28-203ENST00000458610 HIRAP54198 1017 aaPredicted RBP19.99■□□□□ 0.79
CD28-203ENST00000458610 CDC37L1Q7L3B6 337 aa19.99■□□□□ 0.79
CD28-203ENST00000458610 RPAP2Q8IXW5 612 aaPredicted RBP19.99■□□□□ 0.79
CD28-203ENST00000458610 TRPM4Q8TD43 1214 aa19.99■□□□□ 0.79
CD28-203ENST00000458610 DCPSQ96C86 337 aaKnown RBP19.99■□□□□ 0.79
CD28-203ENST00000458610 C1orf115Q9H7X2 142 aa19.99■□□□□ 0.79
CD28-203ENST00000458610 MYOZ2Q9NPC6 264 aa19.99■□□□□ 0.79
CD28-203ENST00000458610 SHTN1A0MZ66 631 aa19.98■□□□□ 0.79
CD28-203ENST00000458610 OS9Q13438 667 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms