RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 SLX4Q8IY92 1834 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 KDM2BQ8NHM5 1336 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 A0A1B0GUL7 405 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 HSPA1AP0DMV8 641 aaKnown RBP10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 HSPA1BP0DMV9 641 aaKnown RBP10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 GYG1P46976 350 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 BCAMP50895 628 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 FKBP4Q02790 459 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 PUM3Q15397 648 aaKnown RBP10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 WASHC4Q2M389 1173 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 TNNI3KQ59H18 835 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 CC2D2BQ6DHV5 1058 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 AACSQ86V21 672 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 ERC1Q8IUD2 1116 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 SMC5Q8IY18 1101 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 OTUD7AQ8TE49 926 aaPredicted RBP10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 GCC1Q96CN9 775 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 KIF1BPQ96EK5 621 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 DBNDD2Q9BQY9 259 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 LNPKQ9C0E8 428 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 TAOK3Q9H2K8 898 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 PODXL2Q9NZ53 605 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 IQSEC3Q9UPP2 1182 aaPredicted RBP10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 LEMD3Q9Y2U8 911 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 FPGT-TNNI3KV9GXZ4 949 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 KIF13BQ9NQT8 1826 aa10.7□□□□□ -0.7
CLTCL1-204ENST00000458188 PPIP5K2O43314 1243 aa10.69□□□□□ -0.7
CLTCL1-204ENST00000458188 SLC5A1P13866 664 aa10.69□□□□□ -0.7
CLTCL1-204ENST00000458188 FGFR2P21802 821 aa10.69□□□□□ -0.7
CLTCL1-204ENST00000458188 SOGA3Q5TF21 947 aa10.69□□□□□ -0.7
CLTCL1-204ENST00000458188 ERICH6BQ5W0A0 696 aa10.69□□□□□ -0.7
CLTCL1-204ENST00000458188 TSHZ3Q63HK5 1081 aa10.69□□□□□ -0.7
CLTCL1-204ENST00000458188 LPIN2Q92539 896 aa10.69□□□□□ -0.7
CLTCL1-204ENST00000458188 XAGE2Q96GT9 111 aa10.69□□□□□ -0.7
CLTCL1-204ENST00000458188 ZC3H12CQ9C0D7 883 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-204ENST00000458188 DBNDD1Q9H9R9 158 aa10.69□□□□□ -0.7
CLTCL1-204ENST00000458188 KCNQ5Q9NR82 932 aa10.69□□□□□ -0.7
CLTCL1-204ENST00000458188 JAG2Q9Y219 1238 aa10.69□□□□□ -0.7
CLTCL1-204ENST00000458188 G3V3G9 751 aa10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 IFIT2P09913 472 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 IFIT1P09914 478 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 IARSP41252 1262 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 UBE4AQ14139 1066 aa10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 GORABQ5T7V8 394 aa10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 DCAF8Q5TAQ9 597 aa10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 CLASRPQ8N2M8 674 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 LARGE2Q8N3Y3 721 aa10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 SMC1BQ8NDV3 1235 aa10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 FAM84BQ96KN1 310 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 PSMD1Q99460 953 aa10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 EYA3Q99504 573 aa10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 RTFDC1Q9BY42 306 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 ZBTB47Q9UFB7 747 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 DBNLQ9UJU6 430 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 AKAP2Q9Y2D5 859 aa10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 PCNTO95613 3336 aa10.68□□□□□ -0.7
CLTCL1-204ENST00000458188 SNED1Q8TER0 1413 aa10.67□□□□□ -0.7
CLTCL1-204ENST00000458188 PHKA1P46020 1223 aa10.67□□□□□ -0.7
CLTCL1-204ENST00000458188 NUCB1Q02818 461 aa10.67□□□□□ -0.7
CLTCL1-204ENST00000458188 CHD1LQ86WJ1 897 aa10.67□□□□□ -0.7
CLTCL1-204ENST00000458188 SUPT20HQ8NEM7 779 aa10.67□□□□□ -0.7
CLTCL1-204ENST00000458188 FBXW7Q969H0 707 aa10.67□□□□□ -0.7
CLTCL1-204ENST00000458188 RRAGCQ9HB90 399 aa10.67□□□□□ -0.7
CLTCL1-204ENST00000458188 IRS2Q9Y4H2 1338 aa10.66□□□□□ -0.7
CLTCL1-204ENST00000458188 PDE4AP27815 886 aa10.66□□□□□ -0.7
CLTCL1-204ENST00000458188 HIBADHP31937 336 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-204ENST00000458188 KIAA2012Q0VF49 1180 aa10.66□□□□□ -0.7
CLTCL1-204ENST00000458188 GRIPAP1Q4V328 841 aa10.66□□□□□ -0.7
CLTCL1-204ENST00000458188 CAVIN4Q5BKX8 364 aa10.66□□□□□ -0.7
CLTCL1-204ENST00000458188 C9orf131Q5VYM1 1079 aa10.66□□□□□ -0.7
CLTCL1-204ENST00000458188 CCDC102BQ68D86 513 aa10.66□□□□□ -0.7
CLTCL1-204ENST00000458188 CENPQQ7L2Z9 268 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-204ENST00000458188 VPS37DQ86XT2 251 aa10.66□□□□□ -0.7
CLTCL1-204ENST00000458188 GPR108Q9NPR9 543 aa10.66□□□□□ -0.7
CLTCL1-204ENST00000458188 SNRKQ9NRH2 765 aa10.66□□□□□ -0.7
CLTCL1-204ENST00000458188 RNF181Q9P0P0 153 aa10.66□□□□□ -0.7
CLTCL1-204ENST00000458188 NDUFB9Q9Y6M9 179 aa10.66□□□□□ -0.7
CLTCL1-204ENST00000458188 YDJCA8MPS7 323 aa10.65□□□□□ -0.7
CLTCL1-204ENST00000458188 ECE2O60344 883 aa10.65□□□□□ -0.7
CLTCL1-204ENST00000458188 RAD17O75943 681 aa10.65□□□□□ -0.7
CLTCL1-204ENST00000458188 CHAF1AQ13111 956 aaPredicted RBP10.65□□□□□ -0.7
CLTCL1-204ENST00000458188 SCARF1Q14162 830 aa10.65□□□□□ -0.7
CLTCL1-204ENST00000458188 TTC39AQ5SRH9 613 aa10.65□□□□□ -0.7
CLTCL1-204ENST00000458188 PI16Q6UXB8 463 aa10.65□□□□□ -0.7
CLTCL1-204ENST00000458188 FBXO33Q7Z6M2 555 aa10.65□□□□□ -0.7
CLTCL1-204ENST00000458188 MXD3Q9BW11 206 aa10.65□□□□□ -0.7
CLTCL1-204ENST00000458188 CD209Q9NNX6 404 aa10.65□□□□□ -0.7
CLTCL1-204ENST00000458188 MYH3P11055 1940 aa10.64□□□□□ -0.71
CLTCL1-204ENST00000458188 FRAT2O75474 233 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-204ENST00000458188 MAP4K4O95819 1239 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-204ENST00000458188 LMNB1P20700 586 aa10.64□□□□□ -0.71
CLTCL1-204ENST00000458188 CCDC158Q5M9N0 1113 aa10.64□□□□□ -0.71
CLTCL1-204ENST00000458188 ZNF804AQ7Z570 1209 aa10.64□□□□□ -0.71
CLTCL1-204ENST00000458188 NIM1KQ8IY84 436 aa10.64□□□□□ -0.71
CLTCL1-204ENST00000458188 JDP2Q8WYK2 163 aa10.64□□□□□ -0.71
CLTCL1-204ENST00000458188 COA1Q9GZY4 146 aa10.64□□□□□ -0.71
CLTCL1-204ENST00000458188 BOLA2Q9H3K6 86 aa10.64□□□□□ -0.71
CLTCL1-204ENST00000458188 ZNF609O15014 1411 aa10.64□□□□□ -0.71
CLTCL1-204ENST00000458188 DUOX1Q9NRD9 1551 aa10.64□□□□□ -0.71
CLTCL1-204ENST00000458188 MED23Q9ULK4 1368 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms