RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 ZBTB38Q8NAP3 1195 aaPredicted RBP18.61■□□□□ 0.57
UPF3AP2-201ENST00000457924 CDCA5Q96FF9 252 aa18.61■□□□□ 0.57
UPF3AP2-201ENST00000457924 GGA1Q9UJY5 639 aa18.61■□□□□ 0.57
UPF3AP2-201ENST00000457924 WDR43Q15061 677 aaKnown RBP eCLIP18.6■□□□□ 0.57
UPF3AP2-201ENST00000457924 AGBL3Q8NEM8 1001 aa18.6■□□□□ 0.57
UPF3AP2-201ENST00000457924 CSRNP1Q96S65 589 aa18.6■□□□□ 0.57
UPF3AP2-201ENST00000457924 SEC31BQ9NQW1 1179 aa18.6■□□□□ 0.57
UPF3AP2-201ENST00000457924 ASTN2O75129 1339 aaPredicted RBP18.59■□□□□ 0.57
UPF3AP2-201ENST00000457924 MYBBP1AQ9BQG0 1328 aaKnown RBP18.59■□□□□ 0.57
UPF3AP2-201ENST00000457924 GABBR2O75899 941 aa18.59■□□□□ 0.57
UPF3AP2-201ENST00000457924 SCARF1Q14162 830 aa18.59■□□□□ 0.57
UPF3AP2-201ENST00000457924 CCDC152Q4G0S7 254 aa18.59■□□□□ 0.57
UPF3AP2-201ENST00000457924 ANGEL2Q5VTE6 544 aaKnown RBP18.59■□□□□ 0.57
UPF3AP2-201ENST00000457924 RSBN1LQ6PCB5 846 aaPredicted RBP18.59■□□□□ 0.57
UPF3AP2-201ENST00000457924 RNF25Q96BH1 459 aaPredicted RBP18.59■□□□□ 0.57
UPF3AP2-201ENST00000457924 PCDHB13Q9Y5F0 798 aa18.59■□□□□ 0.57
UPF3AP2-201ENST00000457924 PSME4Q14997 1843 aa18.58■□□□□ 0.57
UPF3AP2-201ENST00000457924 ZNF280AP59817 542 aaPredicted RBP18.58■□□□□ 0.56
UPF3AP2-201ENST00000457924 MS4A3Q96HJ5 214 aa18.58■□□□□ 0.56
UPF3AP2-201ENST00000457924 ZNF609O15014 1411 aa18.57■□□□□ 0.56
UPF3AP2-201ENST00000457924 SOX10P56693 466 aa18.57■□□□□ 0.56
UPF3AP2-201ENST00000457924 FKBP1BP68106 108 aa18.57■□□□□ 0.56
UPF3AP2-201ENST00000457924 MBIPQ9NS73 344 aa18.57■□□□□ 0.56
UPF3AP2-201ENST00000457924 PDE8AO60658 829 aa18.56■□□□□ 0.56
UPF3AP2-201ENST00000457924 USP17L8P0C7I0 530 aa18.56■□□□□ 0.56
UPF3AP2-201ENST00000457924 CTU1Q7Z7A3 348 aaKnown RBP18.56■□□□□ 0.56
UPF3AP2-201ENST00000457924 RASAL3Q86YV0 1011 aa18.56■□□□□ 0.56
UPF3AP2-201ENST00000457924 CCDC191Q8NCU4 936 aa18.56■□□□□ 0.56
UPF3AP2-201ENST00000457924 MYD88Q99836 296 aa18.56■□□□□ 0.56
UPF3AP2-201ENST00000457924 MYOZ2Q9NPC6 264 aa18.56■□□□□ 0.56
UPF3AP2-201ENST00000457924 PDE4DIPQ5VU43 2346 aa18.56■□□□□ 0.56
UPF3AP2-201ENST00000457924 PAPPA2Q9BXP8 1791 aa18.55■□□□□ 0.56
UPF3AP2-201ENST00000457924 XDHP47989 1333 aa18.55■□□□□ 0.56
UPF3AP2-201ENST00000457924 GALR2O43603 387 aaPredicted RBP18.55■□□□□ 0.56
UPF3AP2-201ENST00000457924 PCCAP05165 728 aaPredicted RBP18.55■□□□□ 0.56
UPF3AP2-201ENST00000457924 IFNL1Q8IU54 200 aa18.55■□□□□ 0.56
UPF3AP2-201ENST00000457924 ANKRD18AQ8IVF6 992 aa18.55■□□□□ 0.56
UPF3AP2-201ENST00000457924 CCDC85AQ96PX6 553 aaPredicted RBP18.55■□□□□ 0.56
UPF3AP2-201ENST00000457924 PHAXQ9H814 394 aaKnown RBP18.55■□□□□ 0.56
UPF3AP2-201ENST00000457924 PCDH10Q9P2E7 1040 aa18.55■□□□□ 0.56
UPF3AP2-201ENST00000457924 PITPNM2Q9BZ72 1349 aa18.54■□□□□ 0.56
UPF3AP2-201ENST00000457924 USP17L3A6NCW0 530 aa18.54■□□□□ 0.56
UPF3AP2-201ENST00000457924 USP17L4A6NCW7 530 aa18.54■□□□□ 0.56
UPF3AP2-201ENST00000457924 ATP2B4P23634 1241 aa18.54■□□□□ 0.56
UPF3AP2-201ENST00000457924 USP17L1Q7RTZ2 530 aa18.54■□□□□ 0.56
UPF3AP2-201ENST00000457924 PODNQ7Z5L7 613 aa18.54■□□□□ 0.56
UPF3AP2-201ENST00000457924 CWC25Q9NXE8 425 aaPredicted RBP18.54■□□□□ 0.56
UPF3AP2-201ENST00000457924 ADAMTS8Q9UP79 889 aa18.54■□□□□ 0.56
UPF3AP2-201ENST00000457924 GMLQ99445 158 aa18.53■□□□□ 0.56
UPF3AP2-201ENST00000457924 PCDHB8Q9UN66 801 aa18.53■□□□□ 0.56
UPF3AP2-201ENST00000457924 ELL2O00472 640 aaPredicted RBP18.52■□□□□ 0.56
UPF3AP2-201ENST00000457924 JARID2Q92833 1246 aaPredicted RBP18.52■□□□□ 0.56
UPF3AP2-201ENST00000457924 DDX58O95786 925 aaKnown RBP18.51■□□□□ 0.55
UPF3AP2-201ENST00000457924 ZNF853P0CG23 659 aa18.51■□□□□ 0.55
UPF3AP2-201ENST00000457924 ZNF467Q7Z7K2 595 aaPredicted RBP18.51■□□□□ 0.55
UPF3AP2-201ENST00000457924 CDC5LQ99459 802 aaKnown RBP18.51■□□□□ 0.55
UPF3AP2-201ENST00000457924 METTL22Q9BUU2 404 aaPredicted RBP18.51■□□□□ 0.55
UPF3AP2-201ENST00000457924 IFT57Q9NWB7 429 aa18.51■□□□□ 0.55
UPF3AP2-201ENST00000457924 HDAC9Q9UKV0 1011 aa18.51■□□□□ 0.55
UPF3AP2-201ENST00000457924 GNAI1P63096 354 aa18.5■□□□□ 0.55
UPF3AP2-201ENST00000457924 CALD1Q05682 793 aaKnown RBP18.5■□□□□ 0.55
UPF3AP2-201ENST00000457924 TTLL12Q14166 644 aaPredicted RBP18.5■□□□□ 0.55
UPF3AP2-201ENST00000457924 PKN2Q16513 984 aaKnown RBP18.5■□□□□ 0.55
UPF3AP2-201ENST00000457924 MOB2Q70IA6 237 aa18.5■□□□□ 0.55
UPF3AP2-201ENST00000457924 CHMP4AQ9BY43 222 aa18.5■□□□□ 0.55
UPF3AP2-201ENST00000457924 SCAF8Q9UPN6 1271 aaKnown RBP18.5■□□□□ 0.55
UPF3AP2-201ENST00000457924 UBE2Q2LH0YL09 131 aa18.49■□□□□ 0.55
UPF3AP2-201ENST00000457924 NF2P35240 595 aa18.49■□□□□ 0.55
UPF3AP2-201ENST00000457924 OGFOD1Q8N543 542 aa18.49■□□□□ 0.55
UPF3AP2-201ENST00000457924 HPS5Q9UPZ3 1129 aa18.49■□□□□ 0.55
UPF3AP2-201ENST00000457924 TNRC18O15417 2968 aaPredicted RBP18.48■□□□□ 0.55
UPF3AP2-201ENST00000457924 MED23Q9ULK4 1368 aa18.48■□□□□ 0.55
UPF3AP2-201ENST00000457924 RIOK3O14730 519 aaKnown RBP18.48■□□□□ 0.55
UPF3AP2-201ENST00000457924 TBC1D8O95759 1140 aa18.48■□□□□ 0.55
UPF3AP2-201ENST00000457924 CTSWP56202 376 aa18.48■□□□□ 0.55
UPF3AP2-201ENST00000457924 DDX10Q13206 875 aaKnown RBP18.48■□□□□ 0.55
UPF3AP2-201ENST00000457924 NBPF9Q3BBW0 867 aa18.48■□□□□ 0.55
UPF3AP2-201ENST00000457924 PRAMEF18Q5VWM3 479 aa18.48■□□□□ 0.55
UPF3AP2-201ENST00000457924 ZNF296Q8WUU4 475 aaPredicted RBP18.48■□□□□ 0.55
UPF3AP2-201ENST00000457924 FBXW7Q969H0 707 aa18.48■□□□□ 0.55
UPF3AP2-201ENST00000457924 MYH3P11055 1940 aa18.48■□□□□ 0.55
UPF3AP2-201ENST00000457924 SPEF2Q9C093 1822 aa18.48■□□□□ 0.55
UPF3AP2-201ENST00000457924 CCDC30Q5VVM6 783 aa18.47■□□□□ 0.55
UPF3AP2-201ENST00000457924 BSDC1Q9NW68 430 aaPredicted RBP18.47■□□□□ 0.55
UPF3AP2-201ENST00000457924 MINPP1Q9UNW1 487 aa18.47■□□□□ 0.55
UPF3AP2-201ENST00000457924 MAP3K2Q9Y2U5 619 aa18.47■□□□□ 0.55
UPF3AP2-201ENST00000457924 MYO3BQ8WXR4 1341 aa18.47■□□□□ 0.55
UPF3AP2-201ENST00000457924 TM4SF4P48230 202 aa18.46■□□□□ 0.55
UPF3AP2-201ENST00000457924 DACT2Q5SW24 774 aa18.46■□□□□ 0.55
UPF3AP2-201ENST00000457924 STRIP1Q5VSL9 837 aa18.46■□□□□ 0.55
UPF3AP2-201ENST00000457924 C8orf58Q8NAV2 365 aa18.46■□□□□ 0.55
UPF3AP2-201ENST00000457924 TTLL11Q8NHH1 800 aa18.46■□□□□ 0.55
UPF3AP2-201ENST00000457924 WTIPA6NIX2 430 aaPredicted RBP18.45■□□□□ 0.54
UPF3AP2-201ENST00000457924 WNT10BO00744 389 aa18.45■□□□□ 0.54
UPF3AP2-201ENST00000457924 MMP14P50281 582 aa18.45■□□□□ 0.54
UPF3AP2-201ENST00000457924 CCT4P50991 539 aaKnown RBP18.45■□□□□ 0.54
UPF3AP2-201ENST00000457924 PRPF38BQ5VTL8 546 aaKnown RBP18.45■□□□□ 0.54
UPF3AP2-201ENST00000457924 MXD3Q9BW11 206 aa18.45■□□□□ 0.54
UPF3AP2-201ENST00000457924 COA1Q9GZY4 146 aa18.45■□□□□ 0.54
UPF3AP2-201ENST00000457924 APAF1O14727 1248 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms