RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 IQGAP1P46940 1657 aa18.97■□□□□ 0.63
LSS-205ENST00000457828 RIMBP2O15034 1052 aa18.97■□□□□ 0.63
LSS-205ENST00000457828 CCAR1Q8IX12 1150 aaKnown RBP18.97■□□□□ 0.63
LSS-205ENST00000457828 OSBPL3Q9H4L5 887 aa18.97■□□□□ 0.63
LSS-205ENST00000457828 CRACR2BQ8N4Y2 399 aaPredicted RBP18.97■□□□□ 0.63
LSS-205ENST00000457828 PDLIM2Q96JY6 352 aa18.97■□□□□ 0.63
LSS-205ENST00000457828 OLFM4Q6UX06 510 aa18.96■□□□□ 0.63
LSS-205ENST00000457828 NUP133Q8WUM0 1156 aa18.96■□□□□ 0.63
LSS-205ENST00000457828 TCEAL9Q9UHQ7 104 aa18.96■□□□□ 0.63
LSS-205ENST00000457828 CCDC66A2RUB6 948 aa18.96■□□□□ 0.63
LSS-205ENST00000457828 SFPQP23246 707 aaKnown RBP eCLIP18.96■□□□□ 0.63
LSS-205ENST00000457828 GCKRQ14397 625 aa18.96■□□□□ 0.63
LSS-205ENST00000457828 SMAP1Q8IYB5 467 aaPredicted RBP18.96■□□□□ 0.63
LSS-205ENST00000457828 FAM227BQ96M60 508 aa18.96■□□□□ 0.63
LSS-205ENST00000457828 SKILP12757 684 aa18.96■□□□□ 0.63
LSS-205ENST00000457828 TCIRG1Q13488 830 aa18.96■□□□□ 0.63
LSS-205ENST00000457828 UBAC1Q9BSL1 405 aa18.96■□□□□ 0.63
LSS-205ENST00000457828 BCL2L12Q9HB09 334 aa18.96■□□□□ 0.63
LSS-205ENST00000457828 CDK12Q9NYV4 1490 aaPredicted RBP18.96■□□□□ 0.63
LSS-205ENST00000457828 ISM2Q6H9L7 571 aa18.95■□□□□ 0.62
LSS-205ENST00000457828 CYP2E1P05181 493 aaPredicted RBP18.95■□□□□ 0.62
LSS-205ENST00000457828 ITGA6P23229 1130 aa18.95■□□□□ 0.62
LSS-205ENST00000457828 CCDC171Q6TFL3 1326 aa18.95■□□□□ 0.62
LSS-205ENST00000457828 UQCRFS1P1P0C7P4 283 aa18.95■□□□□ 0.62
LSS-205ENST00000457828 PROSER3Q2NL68 480 aa18.95■□□□□ 0.62
LSS-205ENST00000457828 CDC37L1Q7L3B6 337 aa18.95■□□□□ 0.62
LSS-205ENST00000457828 IMMTQ16891 758 aaKnown RBP18.95■□□□□ 0.62
LSS-205ENST00000457828 USPL1Q5W0Q7 1092 aa18.95■□□□□ 0.62
LSS-205ENST00000457828 NCOA3Q9Y6Q9 1424 aa18.94■□□□□ 0.62
LSS-205ENST00000457828 USP31Q70CQ4 1352 aa18.94■□□□□ 0.62
LSS-205ENST00000457828 PDE8AO60658 829 aa18.94■□□□□ 0.62
LSS-205ENST00000457828 LDHCP07864 332 aa18.94■□□□□ 0.62
LSS-205ENST00000457828 JAG2Q9Y219 1238 aa18.94■□□□□ 0.62
LSS-205ENST00000457828 TTLL5Q6EMB2 1281 aa18.94■□□□□ 0.62
LSS-205ENST00000457828 RAB11FIP4Q86YS3 637 aa18.94■□□□□ 0.62
LSS-205ENST00000457828 ZNF594Q96JF6 807 aaPredicted RBP18.94■□□□□ 0.62
LSS-205ENST00000457828 TTC41PQ6P2S7 1318 aa18.94■□□□□ 0.62
LSS-205ENST00000457828 SLF2Q8IX21 1173 aa18.94■□□□□ 0.62
LSS-205ENST00000457828 MKNK2Q9HBH9 465 aa18.94■□□□□ 0.62
LSS-205ENST00000457828 PTH1RQ03431 593 aa18.93■□□□□ 0.62
LSS-205ENST00000457828 MAPK8IP2Q13387 824 aaPredicted RBP18.93■□□□□ 0.62
LSS-205ENST00000457828 STX1AQ16623 288 aa18.93■□□□□ 0.62
LSS-205ENST00000457828 MPHOSPH10O00566 681 aaKnown RBP18.93■□□□□ 0.62
LSS-205ENST00000457828 PODXL2Q9NZ53 605 aa18.93■□□□□ 0.62
LSS-205ENST00000457828 CPSF1Q10570 1443 aaKnown RBP18.93■□□□□ 0.62
LSS-205ENST00000457828 SPATA31A6Q5VVP1 1343 aa18.93■□□□□ 0.62
LSS-205ENST00000457828 CFAP100Q494V2 611 aa18.93■□□□□ 0.62
LSS-205ENST00000457828 JDP2Q8WYK2 163 aa18.93■□□□□ 0.62
LSS-205ENST00000457828 RGS12O14924 1447 aa18.93■□□□□ 0.62
LSS-205ENST00000457828 LIG1P18858 919 aa18.93■□□□□ 0.62
LSS-205ENST00000457828 TFCP2Q12800 502 aa18.93■□□□□ 0.62
LSS-205ENST00000457828 LRMPQ12912 555 aa18.93■□□□□ 0.62
LSS-205ENST00000457828 ME3Q16798 604 aa18.93■□□□□ 0.62
LSS-205ENST00000457828 PYCARDQ9ULZ3 195 aa18.93■□□□□ 0.62
LSS-205ENST00000457828 TTF1Q15361 905 aaPredicted RBP18.92■□□□□ 0.62
LSS-205ENST00000457828 UBXN4Q92575 508 aa18.92■□□□□ 0.62
LSS-205ENST00000457828 SOS2Q07890 1332 aaPredicted RBP18.92■□□□□ 0.62
LSS-205ENST00000457828 Q6ZUG5 572 aa18.92■□□□□ 0.62
LSS-205ENST00000457828 TMC6Q7Z403 805 aa18.92■□□□□ 0.62
LSS-205ENST00000457828 FLAD1Q8NFF5 587 aa18.92■□□□□ 0.62
LSS-205ENST00000457828 RBM17Q96I25 401 aaKnown RBP18.92■□□□□ 0.62
LSS-205ENST00000457828 CBX8Q9HC52 389 aa18.92■□□□□ 0.62
LSS-205ENST00000457828 MTMR6Q9Y217 621 aa18.92■□□□□ 0.62
LSS-205ENST00000457828 TIMM10P62072 90 aa18.92■□□□□ 0.62
LSS-205ENST00000457828 SLC4A8Q2Y0W8 1093 aa18.92■□□□□ 0.62
LSS-205ENST00000457828 SUCLG2Q96I99 432 aa18.92■□□□□ 0.62
LSS-205ENST00000457828 PAXBP1Q9Y5B6 917 aa18.92■□□□□ 0.62
LSS-205ENST00000457828 H0YIN7 160 aa18.91■□□□□ 0.62
LSS-205ENST00000457828 ADCK5Q3MIX3 580 aa18.91■□□□□ 0.62
LSS-205ENST00000457828 U3KPZ7 1027 aaPredicted RBP18.91■□□□□ 0.62
LSS-205ENST00000457828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.91■□□□□ 0.62
LSS-205ENST00000457828 GOLGA6L1Q8N7Z2 621 aa18.91■□□□□ 0.62
LSS-205ENST00000457828 DLC1Q96QB1 1528 aa18.91■□□□□ 0.62
LSS-205ENST00000457828 QRICH2Q9H0J4 1663 aa18.91■□□□□ 0.62
LSS-205ENST00000457828 CCDC69A6NI79 296 aa18.91■□□□□ 0.62
LSS-205ENST00000457828 KCNQ2O43526 872 aa18.91■□□□□ 0.62
LSS-205ENST00000457828 XBP1P17861 261 aa18.91■□□□□ 0.62
LSS-205ENST00000457828 GPS2Q13227 327 aa18.91■□□□□ 0.62
LSS-205ENST00000457828 SPTY2D1Q68D10 685 aaPredicted RBP18.91■□□□□ 0.62
LSS-205ENST00000457828 OGFOD1Q8N543 542 aa18.91■□□□□ 0.62
LSS-205ENST00000457828 SSH3Q8TE77 659 aa18.91■□□□□ 0.62
LSS-205ENST00000457828 CTAGE5O15320 804 aa18.91■□□□□ 0.62
LSS-205ENST00000457828 TTLL12Q14166 644 aaPredicted RBP18.91■□□□□ 0.62
LSS-205ENST00000457828 VWDEQ8N2E2 1590 aa18.9■□□□□ 0.62
LSS-205ENST00000457828 TRERF1Q96PN7 1200 aa18.9■□□□□ 0.62
LSS-205ENST00000457828 HOOK1Q9UJC3 728 aaKnown RBP18.9■□□□□ 0.62
LSS-205ENST00000457828 LRRC7Q96NW7 1537 aa18.9■□□□□ 0.62
LSS-205ENST00000457828 BAG3O95817 575 aa18.9■□□□□ 0.62
LSS-205ENST00000457828 NEURL1BA8MQ27 555 aa18.9■□□□□ 0.62
LSS-205ENST00000457828 EYA2O00167 538 aa18.9■□□□□ 0.62
LSS-205ENST00000457828 URI1O94763 535 aaPredicted RBP18.9■□□□□ 0.62
LSS-205ENST00000457828 TTC6Q86TZ1 520 aa18.9■□□□□ 0.62
LSS-205ENST00000457828 AOPEPQ8N6M6 819 aa18.9■□□□□ 0.62
LSS-205ENST00000457828 HMG20BQ9P0W2 317 aa18.9■□□□□ 0.62
LSS-205ENST00000457828 PNPLA6Q8IY17 1366 aa18.89■□□□□ 0.61
LSS-205ENST00000457828 HAND2P61296 217 aa18.89■□□□□ 0.61
LSS-205ENST00000457828 ZNF804AQ7Z570 1209 aa18.89■□□□□ 0.61
LSS-205ENST00000457828 C8orf76Q96K31 380 aa18.89■□□□□ 0.61
LSS-205ENST00000457828 RANBP6O60518 1105 aaKnown RBP18.89■□□□□ 0.61
LSS-205ENST00000457828 IL6STP40189 918 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms