RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 CDC45O75419 566 aa10.7□□□□□ -0.7
RIF1-208ENST00000457745 GTF2E1P29083 439 aaPredicted RBP10.7□□□□□ -0.7
RIF1-208ENST00000457745 PHKA1P46020 1223 aa10.7□□□□□ -0.7
RIF1-208ENST00000457745 MFAP1P55081 439 aaKnown RBP10.7□□□□□ -0.7
RIF1-208ENST00000457745 CHRNDQ07001 517 aa10.7□□□□□ -0.7
RIF1-208ENST00000457745 ATP2B3Q16720 1220 aa10.7□□□□□ -0.7
RIF1-208ENST00000457745 CRY2Q49AN0 593 aa10.7□□□□□ -0.7
RIF1-208ENST00000457745 RILPL2Q969X0 211 aa10.7□□□□□ -0.7
RIF1-208ENST00000457745 NEUROD6Q96NK8 337 aa10.7□□□□□ -0.7
RIF1-208ENST00000457745 CNNM1Q9NRU3 951 aa10.7□□□□□ -0.7
RIF1-208ENST00000457745 CEP126Q9P2H0 1117 aa10.7□□□□□ -0.7
RIF1-208ENST00000457745 POTEB2H3BUK9 544 aa10.69□□□□□ -0.7
RIF1-208ENST00000457745 PDE8BO95263 885 aa10.69□□□□□ -0.7
RIF1-208ENST00000457745 ATP5JP18859 108 aa10.69□□□□□ -0.7
RIF1-208ENST00000457745 CHMLP26374 656 aa10.69□□□□□ -0.7
RIF1-208ENST00000457745 ILDR2Q71H61 639 aa10.69□□□□□ -0.7
RIF1-208ENST00000457745 SNRKQ9NRH2 765 aa10.69□□□□□ -0.7
RIF1-208ENST00000457745 MINPP1Q9UNW1 487 aa10.69□□□□□ -0.7
RIF1-208ENST00000457745 SLX4Q8IY92 1834 aa10.68□□□□□ -0.7
RIF1-208ENST00000457745 KLRG2A4D1S0 409 aaPredicted RBP10.68□□□□□ -0.7
RIF1-208ENST00000457745 TRIM6-TRIM34B2RNG4 842 aa10.68□□□□□ -0.7
RIF1-208ENST00000457745 GLRX3O76003 335 aaKnown RBP10.68□□□□□ -0.7
RIF1-208ENST00000457745 TXNRD3Q86VQ6 643 aa10.68□□□□□ -0.7
RIF1-208ENST00000457745 ANKRD18AQ8IVF6 992 aa10.68□□□□□ -0.7
RIF1-208ENST00000457745 NLRP3Q96P20 1036 aa10.68□□□□□ -0.7
RIF1-208ENST00000457745 DOCK2Q92608 1830 aa10.68□□□□□ -0.7
RIF1-208ENST00000457745 DLEC1Q9Y238 1755 aa10.67□□□□□ -0.7
RIF1-208ENST00000457745 MCAMP43121 646 aa10.67□□□□□ -0.7
RIF1-208ENST00000457745 RPS8P62241 208 aaKnown RBP10.67□□□□□ -0.7
RIF1-208ENST00000457745 SF3B2Q13435 895 aaKnown RBP10.67□□□□□ -0.7
RIF1-208ENST00000457745 DDX46Q7L014 1031 aaKnown RBP10.67□□□□□ -0.7
RIF1-208ENST00000457745 NLGN1Q8N2Q7 840 aa10.67□□□□□ -0.7
RIF1-208ENST00000457745 FAM227BQ96M60 508 aa10.67□□□□□ -0.7
RIF1-208ENST00000457745 DNAJC2Q99543 621 aaKnown RBP10.67□□□□□ -0.7
RIF1-208ENST00000457745 KIF2CQ99661 725 aa10.67□□□□□ -0.7
RIF1-208ENST00000457745 HAUS7Q99871 368 aa10.67□□□□□ -0.7
RIF1-208ENST00000457745 BSDC1Q9NW68 430 aaPredicted RBP10.67□□□□□ -0.7
RIF1-208ENST00000457745 KIF13BQ9NQT8 1826 aa10.67□□□□□ -0.7
RIF1-208ENST00000457745 C10orf71Q711Q0 1435 aa10.67□□□□□ -0.7
RIF1-208ENST00000457745 MYH7P12883 1935 aa10.66□□□□□ -0.7
RIF1-208ENST00000457745 MROH5Q6ZUA9 1318 aa10.66□□□□□ -0.7
RIF1-208ENST00000457745 A0A0D9SFI3 127 aa10.66□□□□□ -0.7
RIF1-208ENST00000457745 POTEMA6NI47 508 aa10.66□□□□□ -0.7
RIF1-208ENST00000457745 PYGBP11216 843 aa10.66□□□□□ -0.7
RIF1-208ENST00000457745 CHRNA5P30532 468 aa10.66□□□□□ -0.7
RIF1-208ENST00000457745 IGHMBP2P38935 993 aaKnown RBP10.66□□□□□ -0.7
RIF1-208ENST00000457745 ZAP70P43403 619 aa10.66□□□□□ -0.7
RIF1-208ENST00000457745 BCAMP50895 628 aa10.66□□□□□ -0.7
RIF1-208ENST00000457745 GPSM2P81274 684 aa10.66□□□□□ -0.7
RIF1-208ENST00000457745 NMIQ13287 307 aaPredicted RBP10.66□□□□□ -0.7
RIF1-208ENST00000457745 GRAPQ13588 217 aa10.66□□□□□ -0.7
RIF1-208ENST00000457745 FLAD1Q8NFF5 587 aa10.66□□□□□ -0.7
RIF1-208ENST00000457745 GRAPLQ8TC17 118 aaPredicted RBP10.66□□□□□ -0.7
RIF1-208ENST00000457745 TBC1D32Q96NH3 1257 aa10.66□□□□□ -0.7
RIF1-208ENST00000457745 SEC62Q99442 399 aaKnown RBP10.66□□□□□ -0.7
RIF1-208ENST00000457745 CDC5LQ99459 802 aaKnown RBP10.66□□□□□ -0.7
RIF1-208ENST00000457745 MPHOSPH8Q99549 860 aa10.66□□□□□ -0.7
RIF1-208ENST00000457745 ESYT1Q9BSJ8 1104 aa10.66□□□□□ -0.7
RIF1-208ENST00000457745 PIH1D3Q9NQM4 214 aaKnown RBP10.66□□□□□ -0.7
RIF1-208ENST00000457745 CHD4Q14839 1912 aa10.66□□□□□ -0.7
RIF1-208ENST00000457745 PSDA5PKW4 1024 aaPredicted RBP10.65□□□□□ -0.7
RIF1-208ENST00000457745 GOLIM4O00461 696 aa10.65□□□□□ -0.7
RIF1-208ENST00000457745 ZBTB7AO95365 584 aa10.65□□□□□ -0.7
RIF1-208ENST00000457745 HOXA10P31260 410 aaPredicted RBP10.65□□□□□ -0.7
RIF1-208ENST00000457745 GYG1P46976 350 aa10.65□□□□□ -0.7
RIF1-208ENST00000457745 ST5P78524 1137 aa10.65□□□□□ -0.7
RIF1-208ENST00000457745 COL9A3Q14050 684 aaPredicted RBP10.65□□□□□ -0.7
RIF1-208ENST00000457745 PUM3Q15397 648 aaKnown RBP10.65□□□□□ -0.7
RIF1-208ENST00000457745 CCDC102BQ68D86 513 aa10.65□□□□□ -0.7
RIF1-208ENST00000457745 CCDC129Q6ZRS4 1044 aa10.65□□□□□ -0.7
RIF1-208ENST00000457745 IQSEC3Q9UPP2 1182 aaPredicted RBP10.65□□□□□ -0.7
RIF1-208ENST00000457745 SNED1Q8TER0 1413 aa10.65□□□□□ -0.7
RIF1-208ENST00000457745 ZNF646O15015 1829 aaPredicted RBP10.65□□□□□ -0.71
RIF1-208ENST00000457745 NPHP1O15259 732 aa10.64□□□□□ -0.71
RIF1-208ENST00000457745 SRGNP10124 158 aa10.64□□□□□ -0.71
RIF1-208ENST00000457745 ARID4AP29374 1257 aaPredicted RBP10.64□□□□□ -0.71
RIF1-208ENST00000457745 RASGRF1Q13972 1273 aa10.64□□□□□ -0.71
RIF1-208ENST00000457745 R3HDM1Q15032 1099 aaKnown RBP10.64□□□□□ -0.71
RIF1-208ENST00000457745 ZNF589Q86UQ0 364 aaPredicted RBP10.64□□□□□ -0.71
RIF1-208ENST00000457745 KIF12Q96FN5 646 aa10.64□□□□□ -0.71
RIF1-208ENST00000457745 BRIP1Q9BX63 1249 aa10.64□□□□□ -0.71
RIF1-208ENST00000457745 HMG20BQ9P0W2 317 aa10.64□□□□□ -0.71
RIF1-208ENST00000457745 PALD1Q9ULE6 856 aa10.64□□□□□ -0.71
RIF1-208ENST00000457745 PARP3Q9Y6F1 533 aa10.64□□□□□ -0.71
RIF1-208ENST00000457745 MYH13Q9UKX3 1938 aa10.64□□□□□ -0.71
RIF1-208ENST00000457745 MED23Q9ULK4 1368 aa10.64□□□□□ -0.71
RIF1-208ENST00000457745 ZNF804BA4D1E1 1349 aa10.63□□□□□ -0.71
RIF1-208ENST00000457745 A0A0G2JLW4 131 aa10.63□□□□□ -0.71
RIF1-208ENST00000457745 ERC2O15083 957 aa10.63□□□□□ -0.71
RIF1-208ENST00000457745 SGSM2O43147 1006 aa10.63□□□□□ -0.71
RIF1-208ENST00000457745 MAP3K13O43283 966 aa10.63□□□□□ -0.71
RIF1-208ENST00000457745 CYP2E1P05181 493 aaPredicted RBP10.63□□□□□ -0.71
RIF1-208ENST00000457745 IFIT1P09914 478 aaKnown RBP10.63□□□□□ -0.71
RIF1-208ENST00000457745 PTH1RQ03431 593 aa10.63□□□□□ -0.71
RIF1-208ENST00000457745 TTC39AQ5SRH9 613 aa10.63□□□□□ -0.71
RIF1-208ENST00000457745 CNTROBQ8N137 903 aa10.63□□□□□ -0.71
RIF1-208ENST00000457745 LPIN2Q92539 896 aa10.63□□□□□ -0.71
RIF1-208ENST00000457745 RPGRQ92834 1020 aaKnown RBP10.63□□□□□ -0.71
RIF1-208ENST00000457745 EVI5LQ96CN4 794 aa10.63□□□□□ -0.71
RIF1-208ENST00000457745 GPATCH3Q96I76 525 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms