RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 PUM3Q15397 648 aaKnown RBP17.52■□□□□ 0.4
SMPD4-215ENST00000457039 EXOC6Q8TAG9 804 aa17.52■□□□□ 0.4
SMPD4-215ENST00000457039 CXCL9Q07325 125 aa17.51■□□□□ 0.39
SMPD4-215ENST00000457039 TFCP2Q12800 502 aa17.51■□□□□ 0.39
SMPD4-215ENST00000457039 COA1Q9GZY4 146 aa17.51■□□□□ 0.39
SMPD4-215ENST00000457039 SCN9AQ15858 1988 aa17.5■□□□□ 0.39
SMPD4-215ENST00000457039 EIF6P56537 245 aaKnown RBP17.5■□□□□ 0.39
SMPD4-215ENST00000457039 PODNQ7Z5L7 613 aa17.5■□□□□ 0.39
SMPD4-215ENST00000457039 LPIN2Q92539 896 aa17.5■□□□□ 0.39
SMPD4-215ENST00000457039 DDNO94850 711 aaPredicted RBP17.49■□□□□ 0.39
SMPD4-215ENST00000457039 ATP2B3Q16720 1220 aa17.49■□□□□ 0.39
SMPD4-215ENST00000457039 DPY19L2Q6NUT2 758 aa17.49■□□□□ 0.39
SMPD4-215ENST00000457039 ZNF784Q8NCA9 323 aaPredicted RBP17.49■□□□□ 0.39
SMPD4-215ENST00000457039 FAM84BQ96KN1 310 aaPredicted RBP17.49■□□□□ 0.39
SMPD4-215ENST00000457039 CD209Q9NNX6 404 aa17.49■□□□□ 0.39
SMPD4-215ENST00000457039 KCNQ5Q9NR82 932 aa17.49■□□□□ 0.39
SMPD4-215ENST00000457039 EXOC6BQ9Y2D4 811 aa17.49■□□□□ 0.39
SMPD4-215ENST00000457039 ZNF609O15014 1411 aa17.48■□□□□ 0.39
SMPD4-215ENST00000457039 WDR90Q96KV7 1748 aa17.48■□□□□ 0.39
SMPD4-215ENST00000457039 IFIT1P09914 478 aaKnown RBP17.48■□□□□ 0.39
SMPD4-215ENST00000457039 SLC5A1P13866 664 aa17.48■□□□□ 0.39
SMPD4-215ENST00000457039 IL1R1P14778 569 aa17.48■□□□□ 0.39
SMPD4-215ENST00000457039 GYG1P46976 350 aa17.48■□□□□ 0.39
SMPD4-215ENST00000457039 IRX6P78412 446 aaPredicted RBP17.48■□□□□ 0.39
SMPD4-215ENST00000457039 CIAPIN1Q6FI81 312 aa17.48■□□□□ 0.39
SMPD4-215ENST00000457039 FBXO33Q7Z6M2 555 aa17.48■□□□□ 0.39
SMPD4-215ENST00000457039 GPC2Q8N158 579 aa17.48■□□□□ 0.39
SMPD4-215ENST00000457039 L3MBTL3Q96JM7 780 aaPredicted RBP17.48■□□□□ 0.39
SMPD4-215ENST00000457039 ARAP2Q8WZ64 1704 aa17.47■□□□□ 0.39
SMPD4-215ENST00000457039 ZNF646O15015 1829 aaPredicted RBP17.47■□□□□ 0.39
SMPD4-215ENST00000457039 PSME4Q14997 1843 aa17.47■□□□□ 0.39
SMPD4-215ENST00000457039 G3V3G9 751 aa17.47■□□□□ 0.39
SMPD4-215ENST00000457039 RAD17O75943 681 aa17.47■□□□□ 0.39
SMPD4-215ENST00000457039 OS9Q13438 667 aaPredicted RBP17.47■□□□□ 0.39
SMPD4-215ENST00000457039 HSP90AB4PQ58FF6 505 aa17.47■□□□□ 0.39
SMPD4-215ENST00000457039 DCAF8Q5TAQ9 597 aa17.47■□□□□ 0.39
SMPD4-215ENST00000457039 ZNF804AQ7Z570 1209 aa17.47■□□□□ 0.39
SMPD4-215ENST00000457039 GPR108Q9NPR9 543 aa17.47■□□□□ 0.39
SMPD4-215ENST00000457039 AKAP2Q9Y2D5 859 aa17.47■□□□□ 0.39
SMPD4-215ENST00000457039 KDM2BQ8NHM5 1336 aa17.47■□□□□ 0.39
SMPD4-215ENST00000457039 A0A1B0GUL7 405 aa17.46■□□□□ 0.39
SMPD4-215ENST00000457039 POTECB2RU33 542 aa17.46■□□□□ 0.39
SMPD4-215ENST00000457039 PSMD14O00487 310 aa17.46■□□□□ 0.39
SMPD4-215ENST00000457039 HIBADHP31937 336 aaKnown RBP17.46■□□□□ 0.39
SMPD4-215ENST00000457039 TIMM10P62072 90 aa17.46■□□□□ 0.39
SMPD4-215ENST00000457039 TNIP1Q15025 636 aa17.46■□□□□ 0.39
SMPD4-215ENST00000457039 ERC1Q8IUD2 1116 aa17.46■□□□□ 0.39
SMPD4-215ENST00000457039 TDRD7Q8NHU6 1098 aaKnown RBP17.46■□□□□ 0.39
SMPD4-215ENST00000457039 CENPBP07199 599 aaPredicted RBP17.45■□□□□ 0.38
SMPD4-215ENST00000457039 VIL1P09327 827 aaKnown RBP17.45■□□□□ 0.38
SMPD4-215ENST00000457039 ADORA1P30542 326 aa17.45■□□□□ 0.38
SMPD4-215ENST00000457039 BCAMP50895 628 aa17.45■□□□□ 0.38
SMPD4-215ENST00000457039 TNNI3KQ59H18 835 aa17.45■□□□□ 0.38
SMPD4-215ENST00000457039 CAVIN4Q5BKX8 364 aa17.45■□□□□ 0.38
SMPD4-215ENST00000457039 ZNF526Q8TF50 670 aaPredicted RBP17.45■□□□□ 0.38
SMPD4-215ENST00000457039 DCTPP1Q9H773 170 aa17.45■□□□□ 0.38
SMPD4-215ENST00000457039 GJA3Q9Y6H8 435 aa17.45■□□□□ 0.38
SMPD4-215ENST00000457039 FPGT-TNNI3KV9GXZ4 949 aa17.45■□□□□ 0.38
SMPD4-215ENST00000457039 USP17L3A6NCW0 530 aa17.44■□□□□ 0.38
SMPD4-215ENST00000457039 USP17L4A6NCW7 530 aa17.44■□□□□ 0.38
SMPD4-215ENST00000457039 ZBTB22O15209 634 aa17.44■□□□□ 0.38
SMPD4-215ENST00000457039 RAB11FIP3O75154 756 aa17.44■□□□□ 0.38
SMPD4-215ENST00000457039 SCNN1DP51172 638 aa17.44■□□□□ 0.38
SMPD4-215ENST00000457039 HDAC1Q13547 482 aaPredicted RBP17.44■□□□□ 0.38
SMPD4-215ENST00000457039 DACT2Q5SW24 774 aa17.44■□□□□ 0.38
SMPD4-215ENST00000457039 USP17L1Q7RTZ2 530 aa17.44■□□□□ 0.38
SMPD4-215ENST00000457039 RHPN1Q8TCX5 695 aa17.44■□□□□ 0.38
SMPD4-215ENST00000457039 NMRK2Q9NPI5 230 aa17.44■□□□□ 0.38
SMPD4-215ENST00000457039 STRIP1Q5VSL9 837 aa17.43■□□□□ 0.38
SMPD4-215ENST00000457039 EAF2Q96CJ1 260 aaPredicted RBP17.43■□□□□ 0.38
SMPD4-215ENST00000457039 KIF1BPQ96EK5 621 aa17.43■□□□□ 0.38
SMPD4-215ENST00000457039 XAGE2Q96GT9 111 aa17.43■□□□□ 0.38
SMPD4-215ENST00000457039 GPBP1L1Q9HC44 474 aaPredicted RBP17.43■□□□□ 0.38
SMPD4-215ENST00000457039 PHKA1P46020 1223 aa17.42■□□□□ 0.38
SMPD4-215ENST00000457039 GMPSP49915 693 aaPredicted RBP17.42■□□□□ 0.38
SMPD4-215ENST00000457039 GTF2IP78347 998 aa17.42■□□□□ 0.38
SMPD4-215ENST00000457039 RSBN1LQ6PCB5 846 aaPredicted RBP17.42■□□□□ 0.38
SMPD4-215ENST00000457039 VPS37DQ86XT2 251 aa17.42■□□□□ 0.38
SMPD4-215ENST00000457039 GMLQ99445 158 aa17.42■□□□□ 0.38
SMPD4-215ENST00000457039 ZBTB12Q9Y330 459 aaPredicted RBP17.42■□□□□ 0.38
SMPD4-215ENST00000457039 FAM205AQ6ZU69 1335 aa17.42■□□□□ 0.38
SMPD4-215ENST00000457039 RPS12P25398 132 aaKnown RBP17.41■□□□□ 0.38
SMPD4-215ENST00000457039 CCDC102BQ68D86 513 aa17.41■□□□□ 0.38
SMPD4-215ENST00000457039 TTLL5Q6EMB2 1281 aa17.41■□□□□ 0.38
SMPD4-215ENST00000457039 DPF2Q92785 391 aa17.41■□□□□ 0.38
SMPD4-215ENST00000457039 NEUROD6Q96NK8 337 aa17.41■□□□□ 0.38
SMPD4-215ENST00000457039 RRAGCQ9HB90 399 aa17.41■□□□□ 0.38
SMPD4-215ENST00000457039 SCN4AP35499 1836 aa17.41■□□□□ 0.38
SMPD4-215ENST00000457039 COL1A1P02452 1464 aaPredicted RBP17.4■□□□□ 0.38
SMPD4-215ENST00000457039 KIF3CO14782 793 aa17.4■□□□□ 0.38
SMPD4-215ENST00000457039 VEGFAP15692 232 aaPredicted RBP17.4■□□□□ 0.38
SMPD4-215ENST00000457039 FKBP1AP62942 108 aaKnown RBP17.4■□□□□ 0.38
SMPD4-215ENST00000457039 AGBL3Q8NEM8 1001 aa17.4■□□□□ 0.38
SMPD4-215ENST00000457039 DBNDD2Q9BQY9 259 aa17.4■□□□□ 0.38
SMPD4-215ENST00000457039 MXD3Q9BW11 206 aa17.4■□□□□ 0.38
SMPD4-215ENST00000457039 IL1RAPL2Q9NP60 686 aa17.4■□□□□ 0.38
SMPD4-215ENST00000457039 GPRC5DQ9NZD1 345 aa17.4■□□□□ 0.38
SMPD4-215ENST00000457039 DBNLQ9UJU6 430 aaKnown RBP17.4■□□□□ 0.38
SMPD4-215ENST00000457039 IQSEC3Q9UPP2 1182 aaPredicted RBP17.4■□□□□ 0.38
SMPD4-215ENST00000457039 IQCA1LA6NCM1 817 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms