RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 ANKRD18AQ8IVF6 992 aa15.37■□□□□ 0.05
LMCD1-206ENST00000456506 MINPP1Q9UNW1 487 aa15.37■□□□□ 0.05
LMCD1-206ENST00000456506 NBPF9Q3BBW0 867 aa15.36■□□□□ 0.05
LMCD1-206ENST00000456506 KSR2Q6VAB6 950 aa15.36■□□□□ 0.05
LMCD1-206ENST00000456506 TXNRD3Q86VQ6 643 aa15.36■□□□□ 0.05
LMCD1-206ENST00000456506 MXD3Q9BW11 206 aa15.36■□□□□ 0.05
LMCD1-206ENST00000456506 GREM2Q9H772 168 aa15.36■□□□□ 0.05
LMCD1-206ENST00000456506 BSDC1Q9NW68 430 aaPredicted RBP15.36■□□□□ 0.05
LMCD1-206ENST00000456506 PI4KAP2A4QPH2 592 aa15.35■□□□□ 0.05
LMCD1-206ENST00000456506 CALD1Q05682 793 aaKnown RBP15.35■□□□□ 0.05
LMCD1-206ENST00000456506 CCDC30Q5VVM6 783 aa15.35■□□□□ 0.05
LMCD1-206ENST00000456506 PI4KAP1Q8N8J0 262 aa15.35■□□□□ 0.05
LMCD1-206ENST00000456506 HTTP42858 3142 aa15.34■□□□□ 0.05
LMCD1-206ENST00000456506 NEURL1BA8MQ27 555 aa15.34■□□□□ 0.05
LMCD1-206ENST00000456506 G3V3G9 751 aa15.34■□□□□ 0.05
LMCD1-206ENST00000456506 H7C1W4 665 aa15.34■□□□□ 0.05
LMCD1-206ENST00000456506 DDX58O95786 925 aaKnown RBP15.34■□□□□ 0.05
LMCD1-206ENST00000456506 CCT4P50991 539 aaKnown RBP15.34■□□□□ 0.05
LMCD1-206ENST00000456506 CASP7P55210 303 aa15.34■□□□□ 0.05
LMCD1-206ENST00000456506 CWF19L2Q2TBE0 894 aaKnown RBP15.34■□□□□ 0.05
LMCD1-206ENST00000456506 DCAF8Q5TAQ9 597 aa15.34■□□□□ 0.05
LMCD1-206ENST00000456506 G2E3Q7L622 706 aa15.34■□□□□ 0.05
LMCD1-206ENST00000456506 REM2Q8IYK8 340 aaPredicted RBP15.34■□□□□ 0.05
LMCD1-206ENST00000456506 CDC5LQ99459 802 aaKnown RBP15.34■□□□□ 0.05
LMCD1-206ENST00000456506 IRS2Q9Y4H2 1338 aa15.34■□□□□ 0.05
LMCD1-206ENST00000456506 WNT10BO00744 389 aa15.33■□□□□ 0.04
LMCD1-206ENST00000456506 KLRK1P26718 216 aa15.33■□□□□ 0.04
LMCD1-206ENST00000456506 PRAMEF18Q5VWM3 479 aa15.33■□□□□ 0.04
LMCD1-206ENST00000456506 TSR2Q969E8 191 aaKnown RBP15.33■□□□□ 0.04
LMCD1-206ENST00000456506 ZBED3Q96IU2 234 aaPredicted RBP15.33■□□□□ 0.04
LMCD1-206ENST00000456506 SSC5DA1L4H1 1573 aa15.32■□□□□ 0.04
LMCD1-206ENST00000456506 UBE2Q2LH0YL09 131 aa15.32■□□□□ 0.04
LMCD1-206ENST00000456506 CCDC184Q52MB2 194 aa15.32■□□□□ 0.04
LMCD1-206ENST00000456506 STRIP1Q5VSL9 837 aa15.32■□□□□ 0.04
LMCD1-206ENST00000456506 CTU1Q7Z7A3 348 aaKnown RBP15.32■□□□□ 0.04
LMCD1-206ENST00000456506 PLA2G12BQ9BX93 195 aa15.32■□□□□ 0.04
LMCD1-206ENST00000456506 TM4SF4P48230 202 aa15.31■□□□□ 0.04
LMCD1-206ENST00000456506 SOX10P56693 466 aa15.31■□□□□ 0.04
LMCD1-206ENST00000456506 COA1Q9GZY4 146 aa15.31■□□□□ 0.04
LMCD1-206ENST00000456506 MYO3BQ8WXR4 1341 aa15.31■□□□□ 0.04
LMCD1-206ENST00000456506 SASH1O94885 1247 aa15.3■□□□□ 0.04
LMCD1-206ENST00000456506 COL1A1P02452 1464 aaPredicted RBP15.3■□□□□ 0.04
LMCD1-206ENST00000456506 CSF1RP07333 972 aa15.3■□□□□ 0.04
LMCD1-206ENST00000456506 CENPFP49454 3210 aa15.3■□□□□ 0.04
LMCD1-206ENST00000456506 CCDC27Q2M243 656 aa15.3■□□□□ 0.04
LMCD1-206ENST00000456506 NOM1Q5C9Z4 860 aaKnown RBP15.3■□□□□ 0.04
LMCD1-206ENST00000456506 UBE3BQ7Z3V4 1068 aa15.3■□□□□ 0.04
LMCD1-206ENST00000456506 LEMD3Q9Y2U8 911 aa15.3■□□□□ 0.04
LMCD1-206ENST00000456506 ZNF804BA4D1E1 1349 aa15.29■□□□□ 0.04
LMCD1-206ENST00000456506 GCKRQ14397 625 aa15.29■□□□□ 0.04
LMCD1-206ENST00000456506 CFHR5Q9BXR6 569 aa15.29■□□□□ 0.04
LMCD1-206ENST00000456506 CHMP4AQ9BY43 222 aa15.29■□□□□ 0.04
LMCD1-206ENST00000456506 BRCA2P51587 3418 aa15.28■□□□□ 0.04
LMCD1-206ENST00000456506 TBC1D8O95759 1140 aa15.28■□□□□ 0.04
LMCD1-206ENST00000456506 MMP14P50281 582 aa15.28■□□□□ 0.04
LMCD1-206ENST00000456506 TWISTNBQ3B726 338 aaPredicted RBP15.28■□□□□ 0.04
LMCD1-206ENST00000456506 LDLRAD1Q5T700 205 aa15.28■□□□□ 0.04
LMCD1-206ENST00000456506 WWC1Q8IX03 1113 aa15.28■□□□□ 0.04
LMCD1-206ENST00000456506 ZNF296Q8WUU4 475 aaPredicted RBP15.28■□□□□ 0.04
LMCD1-206ENST00000456506 HPS5Q9UPZ3 1129 aa15.28■□□□□ 0.04
LMCD1-206ENST00000456506 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
LMCD1-206ENST00000456506 ITGA6P23229 1130 aa15.27■□□□□ 0.04
LMCD1-206ENST00000456506 PTPN12Q05209 780 aaKnown RBP15.27■□□□□ 0.04
LMCD1-206ENST00000456506 NEXNQ0ZGT2 675 aa15.27■□□□□ 0.04
LMCD1-206ENST00000456506 CERS5Q8N5B7 392 aa15.27■□□□□ 0.04
LMCD1-206ENST00000456506 R3HDMLQ9H3Y0 253 aa15.27■□□□□ 0.04
LMCD1-206ENST00000456506 MYH13Q9UKX3 1938 aa15.27■□□□□ 0.03
LMCD1-206ENST00000456506 IL16Q14005 1332 aa15.26■□□□□ 0.03
LMCD1-206ENST00000456506 TTLL5Q6EMB2 1281 aa15.26■□□□□ 0.03
LMCD1-206ENST00000456506 KIAA0825Q8IV33 1275 aa15.26■□□□□ 0.03
LMCD1-206ENST00000456506 OGFOD1Q8N543 542 aa15.26■□□□□ 0.03
LMCD1-206ENST00000456506 STK31Q9BXU1 1019 aa15.26■□□□□ 0.03
LMCD1-206ENST00000456506 GPR25O00155 361 aa15.25■□□□□ 0.03
LMCD1-206ENST00000456506 SNAP23O00161 211 aa15.25■□□□□ 0.03
LMCD1-206ENST00000456506 IGHMBP2P38935 993 aaKnown RBP15.25■□□□□ 0.03
LMCD1-206ENST00000456506 FOXO4P98177 505 aa15.25■□□□□ 0.03
LMCD1-206ENST00000456506 CHRNDQ07001 517 aa15.25■□□□□ 0.03
LMCD1-206ENST00000456506 FLIIQ13045 1269 aa15.25■□□□□ 0.03
LMCD1-206ENST00000456506 C15orf52Q6ZUT6 534 aaKnown RBP15.25■□□□□ 0.03
LMCD1-206ENST00000456506 MTMR14Q8NCE2 650 aa15.25■□□□□ 0.03
LMCD1-206ENST00000456506 ANKRD2Q9GZV1 360 aa15.25■□□□□ 0.03
LMCD1-206ENST00000456506 CD209Q9NNX6 404 aa15.25■□□□□ 0.03
LMCD1-206ENST00000456506 FZD1Q9UP38 647 aa15.25■□□□□ 0.03
LMCD1-206ENST00000456506 PCDHAC2Q9Y5I4 1007 aa15.25■□□□□ 0.03
LMCD1-206ENST00000456506 MKI67P46013 3256 aaKnown RBP15.25■□□□□ 0.03
LMCD1-206ENST00000456506 AOX1Q06278 1338 aa15.24■□□□□ 0.03
LMCD1-206ENST00000456506 GTF2IP78347 998 aa15.24■□□□□ 0.03
LMCD1-206ENST00000456506 PKN2Q16513 984 aaKnown RBP15.24■□□□□ 0.03
LMCD1-206ENST00000456506 MAP3K11Q16584 847 aa15.24■□□□□ 0.03
LMCD1-206ENST00000456506 NCBP3Q53F19 620 aaKnown RBP15.24■□□□□ 0.03
LMCD1-206ENST00000456506 APOBEC3FQ8IUX4 373 aaKnown RBP15.24■□□□□ 0.03
LMCD1-206ENST00000456506 LINS1Q8NG48 757 aa15.24■□□□□ 0.03
LMCD1-206ENST00000456506 DNAAF4Q8WXU2 420 aa15.24■□□□□ 0.03
LMCD1-206ENST00000456506 FBXW7Q969H0 707 aa15.24■□□□□ 0.03
LMCD1-206ENST00000456506 ZSWIM8A7E2V4 1837 aa15.24■□□□□ 0.03
LMCD1-206ENST00000456506 FANCIQ9NVI1 1328 aa15.23■□□□□ 0.03
LMCD1-206ENST00000456506 MKRN3Q13064 507 aaKnown RBP15.23■□□□□ 0.03
LMCD1-206ENST00000456506 SPRYD7Q5W111 196 aa15.23■□□□□ 0.03
LMCD1-206ENST00000456506 VAMP4O75379 141 aa15.22■□□□□ 0.03
LMCD1-206ENST00000456506 IL1R1P14778 569 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms