RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 BEGAINQ9BUH8 593 aa16.48■□□□□ 0.23
TREX1-203ENST00000456089 AKAP11Q9UKA4 1901 aa16.47■□□□□ 0.23
TREX1-203ENST00000456089 USP17L3A6NCW0 530 aa16.47■□□□□ 0.23
TREX1-203ENST00000456089 USP17L4A6NCW7 530 aa16.47■□□□□ 0.23
TREX1-203ENST00000456089 MAP2K2P36507 400 aa16.47■□□□□ 0.23
TREX1-203ENST00000456089 SCARF1Q14162 830 aa16.47■□□□□ 0.23
TREX1-203ENST00000456089 ANGEL2Q5VTE6 544 aaKnown RBP16.47■□□□□ 0.23
TREX1-203ENST00000456089 DIEXFQ68CQ4 756 aaKnown RBP16.47■□□□□ 0.23
TREX1-203ENST00000456089 USP17L1Q7RTZ2 530 aa16.47■□□□□ 0.23
TREX1-203ENST00000456089 GMLQ99445 158 aa16.47■□□□□ 0.23
TREX1-203ENST00000456089 GBA2Q9HCG7 927 aaPredicted RBP16.47■□□□□ 0.23
TREX1-203ENST00000456089 MED23Q9ULK4 1368 aa16.47■□□□□ 0.23
TREX1-203ENST00000456089 SNAP23O00161 211 aa16.46■□□□□ 0.23
TREX1-203ENST00000456089 IGHMBP2P38935 993 aaKnown RBP16.46■□□□□ 0.23
TREX1-203ENST00000456089 ZNF280AP59817 542 aaPredicted RBP16.46■□□□□ 0.23
TREX1-203ENST00000456089 AGBL3Q8NEM8 1001 aa16.46■□□□□ 0.23
TREX1-203ENST00000456089 LINS1Q8NG48 757 aa16.46■□□□□ 0.23
TREX1-203ENST00000456089 HHIPL1Q96JK4 782 aa16.46■□□□□ 0.23
TREX1-203ENST00000456089 USP17L8P0C7I0 530 aa16.45■□□□□ 0.22
TREX1-203ENST00000456089 PODNQ7Z5L7 613 aa16.45■□□□□ 0.22
TREX1-203ENST00000456089 SULF1Q8IWU6 871 aa16.45■□□□□ 0.22
TREX1-203ENST00000456089 C2orf69Q8N8R5 385 aa16.45■□□□□ 0.22
TREX1-203ENST00000456089 CDCA5Q96FF9 252 aa16.45■□□□□ 0.22
TREX1-203ENST00000456089 PLA2G12BQ9BX93 195 aa16.45■□□□□ 0.22
TREX1-203ENST00000456089 MYOZ2Q9NPC6 264 aa16.45■□□□□ 0.22
TREX1-203ENST00000456089 CHMP3Q9Y3E7 222 aa16.45■□□□□ 0.22
TREX1-203ENST00000456089 ZNF609O15014 1411 aa16.45■□□□□ 0.22
TREX1-203ENST00000456089 CSF1RP07333 972 aa16.44■□□□□ 0.22
TREX1-203ENST00000456089 DACT2Q5SW24 774 aa16.44■□□□□ 0.22
TREX1-203ENST00000456089 HELBQ8NG08 1087 aaPredicted RBP16.44■□□□□ 0.22
TREX1-203ENST00000456089 MPHOSPH8Q99549 860 aa16.44■□□□□ 0.22
TREX1-203ENST00000456089 ZNF804BA4D1E1 1349 aa16.44■□□□□ 0.22
TREX1-203ENST00000456089 FAM155AB1AL88 458 aaPredicted RBP16.43■□□□□ 0.22
TREX1-203ENST00000456089 TAF5LO75529 589 aa16.43■□□□□ 0.22
TREX1-203ENST00000456089 FOXO4P98177 505 aa16.43■□□□□ 0.22
TREX1-203ENST00000456089 CHRNDQ07001 517 aa16.43■□□□□ 0.22
TREX1-203ENST00000456089 NBPF9Q3BBW0 867 aa16.43■□□□□ 0.22
TREX1-203ENST00000456089 EPHA10Q5JZY3 1008 aa16.43■□□□□ 0.22
TREX1-203ENST00000456089 BEND3Q5T5X7 828 aa16.43■□□□□ 0.22
TREX1-203ENST00000456089 PRAMEF18Q5VWM3 479 aa16.43■□□□□ 0.22
TREX1-203ENST00000456089 RGMBQ6NW40 437 aa16.43■□□□□ 0.22
TREX1-203ENST00000456089 ZNF157P51786 506 aaPredicted RBP16.42■□□□□ 0.22
TREX1-203ENST00000456089 BRPF1P55201 1214 aaPredicted RBP16.42■□□□□ 0.22
TREX1-203ENST00000456089 MOB2Q70IA6 237 aa16.42■□□□□ 0.22
TREX1-203ENST00000456089 ABHD8Q96I13 439 aa16.42■□□□□ 0.22
TREX1-203ENST00000456089 ZNF594Q96JF6 807 aaPredicted RBP16.42■□□□□ 0.22
TREX1-203ENST00000456089 LEMD3Q9Y2U8 911 aa16.42■□□□□ 0.22
TREX1-203ENST00000456089 PAPPA2Q9BXP8 1791 aa16.41■□□□□ 0.22
TREX1-203ENST00000456089 ECM29Q5VYK3 1845 aa16.41■□□□□ 0.22
TREX1-203ENST00000456089 ANKRD18BA2A2Z9 1011 aa16.41■□□□□ 0.22
TREX1-203ENST00000456089 E9PSI1 815 aa16.41■□□□□ 0.22
TREX1-203ENST00000456089 SASH1O94885 1247 aa16.41■□□□□ 0.22
TREX1-203ENST00000456089 KCNJ4P48050 445 aa16.41■□□□□ 0.22
TREX1-203ENST00000456089 NOGQ13253 232 aa16.41■□□□□ 0.22
TREX1-203ENST00000456089 COA1Q9GZY4 146 aa16.41■□□□□ 0.22
TREX1-203ENST00000456089 GTF2IP78347 998 aa16.4■□□□□ 0.22
TREX1-203ENST00000456089 KIF23Q02241 960 aaPredicted RBP16.4■□□□□ 0.22
TREX1-203ENST00000456089 SLC4A10Q6U841 1118 aa16.4■□□□□ 0.22
TREX1-203ENST00000456089 LMBR1LQ6UX01 489 aa16.4■□□□□ 0.22
TREX1-203ENST00000456089 KIAA0825Q8IV33 1275 aa16.4■□□□□ 0.22
TREX1-203ENST00000456089 ANKRD2Q9GZV1 360 aa16.4■□□□□ 0.22
TREX1-203ENST00000456089 PLIN1O60240 522 aa16.39■□□□□ 0.21
TREX1-203ENST00000456089 IFIT5Q13325 482 aaKnown RBP16.39■□□□□ 0.21
TREX1-203ENST00000456089 STRIP1Q5VSL9 837 aa16.39■□□□□ 0.21
TREX1-203ENST00000456089 TTLL5Q6EMB2 1281 aa16.39■□□□□ 0.21
TREX1-203ENST00000456089 ZNF521Q96K83 1311 aa16.39■□□□□ 0.21
TREX1-203ENST00000456089 GRM8O00222 908 aa16.38■□□□□ 0.21
TREX1-203ENST00000456089 WNT10BO00744 389 aa16.38■□□□□ 0.21
TREX1-203ENST00000456089 JAG2Q9Y219 1238 aa16.38■□□□□ 0.21
TREX1-203ENST00000456089 IRS2Q9Y4H2 1338 aa16.38■□□□□ 0.21
TREX1-203ENST00000456089 UBE2Q2LH0YL09 131 aa16.37■□□□□ 0.21
TREX1-203ENST00000456089 SLC10A3P09131 477 aa16.37■□□□□ 0.21
TREX1-203ENST00000456089 MIER1Q8N108 512 aa16.37■□□□□ 0.21
TREX1-203ENST00000456089 OGFOD1Q8N543 542 aa16.37■□□□□ 0.21
TREX1-203ENST00000456089 CCDC102AQ96A19 550 aa16.37■□□□□ 0.21
TREX1-203ENST00000456089 CD209Q9NNX6 404 aa16.37■□□□□ 0.21
TREX1-203ENST00000456089 C9orf78Q9NZ63 289 aaPredicted RBP16.37■□□□□ 0.21
TREX1-203ENST00000456089 PCDHAC2Q9Y5I4 1007 aa16.37■□□□□ 0.21
TREX1-203ENST00000456089 PITPNM2Q9BZ72 1349 aa16.37■□□□□ 0.21
TREX1-203ENST00000456089 CCDC85CA6NKD9 419 aa16.36■□□□□ 0.21
TREX1-203ENST00000456089 CA12O43570 354 aa16.36■□□□□ 0.21
TREX1-203ENST00000456089 RASAL3Q86YV0 1011 aa16.36■□□□□ 0.21
TREX1-203ENST00000456089 CERS5Q8N5B7 392 aa16.36■□□□□ 0.21
TREX1-203ENST00000456089 SUCLG2Q96I99 432 aa16.36■□□□□ 0.21
TREX1-203ENST00000456089 MYO3BQ8WXR4 1341 aa16.36■□□□□ 0.21
TREX1-203ENST00000456089 F8W031 263 aaPredicted RBP16.35■□□□□ 0.21
TREX1-203ENST00000456089 TRPA1O75762 1119 aa16.35■□□□□ 0.21
TREX1-203ENST00000456089 PRKG1Q13976 671 aa16.35■□□□□ 0.21
TREX1-203ENST00000456089 TTLL12Q14166 644 aaPredicted RBP16.35■□□□□ 0.21
TREX1-203ENST00000456089 TAF7LQ5H9L4 462 aa16.35■□□□□ 0.21
TREX1-203ENST00000456089 CSRNP1Q96S65 589 aa16.35■□□□□ 0.21
TREX1-203ENST00000456089 SRCIN1Q9C0H9 1055 aa16.35■□□□□ 0.21
TREX1-203ENST00000456089 MCOLN1Q9GZU1 580 aa16.35■□□□□ 0.21
TREX1-203ENST00000456089 FZD1Q9UP38 647 aa16.35■□□□□ 0.21
TREX1-203ENST00000456089 SLFN5Q08AF3 891 aa16.34■□□□□ 0.21
TREX1-203ENST00000456089 MKRN3Q13064 507 aaKnown RBP16.34■□□□□ 0.21
TREX1-203ENST00000456089 CCDC57Q2TAC2 916 aa16.34■□□□□ 0.21
TREX1-203ENST00000456089 LDHAL6AQ6ZMR3 332 aa16.34■□□□□ 0.21
TREX1-203ENST00000456089 KAZALD1Q96I82 304 aa16.34■□□□□ 0.21
TREX1-203ENST00000456089 PUS3Q9BZE2 481 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms