RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 PSME4Q14997 1843 aa22.35■■□□□ 1.17
COL13A1-206ENST00000456019 HSPA1AP0DMV8 641 aaKnown RBP22.34■■□□□ 1.17
COL13A1-206ENST00000456019 HSPA1BP0DMV9 641 aaKnown RBP22.34■■□□□ 1.17
COL13A1-206ENST00000456019 ZNF280AP59817 542 aaPredicted RBP22.34■■□□□ 1.17
COL13A1-206ENST00000456019 TXNRD3Q86VQ6 643 aa22.34■■□□□ 1.17
COL13A1-206ENST00000456019 GMLQ99445 158 aa22.34■■□□□ 1.17
COL13A1-206ENST00000456019 TRPM7Q96QT4 1865 aa22.34■■□□□ 1.17
COL13A1-206ENST00000456019 CELF2O95319 508 aaKnown RBP22.33■■□□□ 1.17
COL13A1-206ENST00000456019 LDHAL6AQ6ZMR3 332 aa22.33■■□□□ 1.17
COL13A1-206ENST00000456019 TAF5LO75529 589 aa22.32■■□□□ 1.16
COL13A1-206ENST00000456019 USP17L8P0C7I0 530 aa22.32■■□□□ 1.16
COL13A1-206ENST00000456019 KLRK1P26718 216 aa22.32■■□□□ 1.16
COL13A1-206ENST00000456019 STRIP1Q5VSL9 837 aa22.32■■□□□ 1.16
COL13A1-206ENST00000456019 DIEXFQ68CQ4 756 aaKnown RBP22.32■■□□□ 1.16
COL13A1-206ENST00000456019 USP48Q86UV5 1035 aa22.32■■□□□ 1.16
COL13A1-206ENST00000456019 HELBQ8NG08 1087 aaPredicted RBP22.32■■□□□ 1.16
COL13A1-206ENST00000456019 DCPSQ96C86 337 aaKnown RBP22.32■■□□□ 1.16
COL13A1-206ENST00000456019 KAZALD1Q96I82 304 aa22.32■■□□□ 1.16
COL13A1-206ENST00000456019 ZNF594Q96JF6 807 aaPredicted RBP22.32■■□□□ 1.16
COL13A1-206ENST00000456019 CNNM1Q9NRU3 951 aa22.32■■□□□ 1.16
COL13A1-206ENST00000456019 TLL2Q9Y6L7 1015 aa22.32■■□□□ 1.16
COL13A1-206ENST00000456019 PCNTO95613 3336 aa22.32■■□□□ 1.16
COL13A1-206ENST00000456019 MYO3BQ8WXR4 1341 aa22.31■■□□□ 1.16
COL13A1-206ENST00000456019 DACT2Q5SW24 774 aa22.31■■□□□ 1.16
COL13A1-206ENST00000456019 C15orf52Q6ZUT6 534 aaKnown RBP22.31■■□□□ 1.16
COL13A1-206ENST00000456019 KRT26Q7Z3Y9 468 aa22.31■■□□□ 1.16
COL13A1-206ENST00000456019 FBXW7Q969H0 707 aa22.31■■□□□ 1.16
COL13A1-206ENST00000456019 ZNF408Q9H9D4 720 aa22.3■■□□□ 1.16
COL13A1-206ENST00000456019 WDR33Q9C0J8 1336 aaKnown RBP22.3■■□□□ 1.16
COL13A1-206ENST00000456019 RABL6Q3YEC7 729 aaPredicted RBP22.29■■□□□ 1.16
COL13A1-206ENST00000456019 TTLL5Q6EMB2 1281 aa22.29■■□□□ 1.16
COL13A1-206ENST00000456019 BICC1Q9H694 974 aaKnown RBP22.29■■□□□ 1.16
COL13A1-206ENST00000456019 MYOZ2Q9NPC6 264 aa22.29■■□□□ 1.16
COL13A1-206ENST00000456019 SNAP23O00161 211 aa22.28■■□□□ 1.16
COL13A1-206ENST00000456019 ECE1P42892 770 aa22.28■■□□□ 1.16
COL13A1-206ENST00000456019 BRPF1P55201 1214 aaPredicted RBP22.28■■□□□ 1.16
COL13A1-206ENST00000456019 PAXIP1Q6ZW49 1069 aaPredicted RBP22.28■■□□□ 1.16
COL13A1-206ENST00000456019 MIER1Q8N108 512 aa22.28■■□□□ 1.16
COL13A1-206ENST00000456019 USP44Q9H0E7 712 aa22.28■■□□□ 1.16
COL13A1-206ENST00000456019 CD209Q9NNX6 404 aa22.28■■□□□ 1.16
COL13A1-206ENST00000456019 GGA3Q9NZ52 723 aa22.28■■□□□ 1.16
COL13A1-206ENST00000456019 IRS2Q9Y4H2 1338 aa22.28■■□□□ 1.16
COL13A1-206ENST00000456019 A0A1B0GUL6 1792 aa22.27■■□□□ 1.16
COL13A1-206ENST00000456019 PLIN1O60240 522 aa22.27■■□□□ 1.16
COL13A1-206ENST00000456019 MMP14P50281 582 aa22.27■■□□□ 1.16
COL13A1-206ENST00000456019 SCARF1Q14162 830 aa22.27■■□□□ 1.16
COL13A1-206ENST00000456019 ZNF804AQ7Z570 1209 aa22.27■■□□□ 1.16
COL13A1-206ENST00000456019 SAPCD2Q86UD0 394 aa22.27■■□□□ 1.16
COL13A1-206ENST00000456019 SULF1Q8IWU6 871 aa22.27■■□□□ 1.16
COL13A1-206ENST00000456019 OGFOD1Q8N543 542 aa22.27■■□□□ 1.16
COL13A1-206ENST00000456019 ANKRD44Q8N8A2 993 aa22.27■■□□□ 1.16
COL13A1-206ENST00000456019 CAPNS2Q96L46 248 aa22.27■■□□□ 1.16
COL13A1-206ENST00000456019 MXD3Q9BW11 206 aa22.27■■□□□ 1.16
COL13A1-206ENST00000456019 ADM5C9JUS6 153 aa22.26■■□□□ 1.15
COL13A1-206ENST00000456019 GTF2IP78347 998 aa22.26■■□□□ 1.15
COL13A1-206ENST00000456019 HHIPL1Q96JK4 782 aa22.26■■□□□ 1.15
COL13A1-206ENST00000456019 NOB1Q9ULX3 412 aaKnown RBP22.26■■□□□ 1.15
COL13A1-206ENST00000456019 ZNF646O15015 1829 aaPredicted RBP22.25■■□□□ 1.15
COL13A1-206ENST00000456019 CYP4F22Q6NT55 531 aa22.25■■□□□ 1.15
COL13A1-206ENST00000456019 API5Q9BZZ5 524 aaKnown RBP22.25■■□□□ 1.15
COL13A1-206ENST00000456019 ASTN2O75129 1339 aaPredicted RBP22.25■■□□□ 1.15
COL13A1-206ENST00000456019 IL1R1P14778 569 aa22.24■■□□□ 1.15
COL13A1-206ENST00000456019 RARSP54136 660 aaKnown RBP22.24■■□□□ 1.15
COL13A1-206ENST00000456019 UBE4AQ14139 1066 aa22.24■■□□□ 1.15
COL13A1-206ENST00000456019 IFFO2Q5TF58 517 aa22.24■■□□□ 1.15
COL13A1-206ENST00000456019 ANGEL2Q5VTE6 544 aaKnown RBP22.24■■□□□ 1.15
COL13A1-206ENST00000456019 DLK2Q6UY11 383 aa22.24■■□□□ 1.15
COL13A1-206ENST00000456019 AIDAQ96BJ3 306 aa22.24■■□□□ 1.15
COL13A1-206ENST00000456019 PUS3Q9BZE2 481 aaKnown RBP22.24■■□□□ 1.15
COL13A1-206ENST00000456019 RIPOR2Q9Y4F9 1068 aa22.24■■□□□ 1.15
COL13A1-206ENST00000456019 MROH5Q6ZUA9 1318 aa22.24■■□□□ 1.15
COL13A1-206ENST00000456019 PITPNM2Q9BZ72 1349 aa22.24■■□□□ 1.15
COL13A1-206ENST00000456019 GRM1Q13255 1194 aa22.23■■□□□ 1.15
COL13A1-206ENST00000456019 COL13A1Q5TAT6 717 aaPredicted RBP22.23■■□□□ 1.15
COL13A1-206ENST00000456019 WBP1LQ9NX94 342 aa22.23■■□□□ 1.15
COL13A1-206ENST00000456019 HDAC9Q9UKV0 1011 aa22.23■■□□□ 1.15
COL13A1-206ENST00000456019 MAP2K1Q02750 393 aaPredicted RBP22.22■■□□□ 1.15
COL13A1-206ENST00000456019 THSD7BQ9C0I4 1608 aa22.21■■□□□ 1.15
COL13A1-206ENST00000456019 FOXN1O15353 648 aa22.21■■□□□ 1.15
COL13A1-206ENST00000456019 KIAA0825Q8IV33 1275 aa22.21■■□□□ 1.15
COL13A1-206ENST00000456019 C2orf69Q8N8R5 385 aa22.21■■□□□ 1.15
COL13A1-206ENST00000456019 GBA2Q9HCG7 927 aaPredicted RBP22.21■■□□□ 1.15
COL13A1-206ENST00000456019 KIF16BQ96L93 1317 aa22.21■■□□□ 1.15
COL13A1-206ENST00000456019 POLR2AP24928 1970 aaKnown RBP22.2■■□□□ 1.14
COL13A1-206ENST00000456019 HUNKP57058 714 aa22.2■■□□□ 1.14
COL13A1-206ENST00000456019 NBPF9Q3BBW0 867 aa22.2■■□□□ 1.14
COL13A1-206ENST00000456019 ARHGAP45Q92619 1136 aa22.2■■□□□ 1.14
COL13A1-206ENST00000456019 CDCA5Q96FF9 252 aa22.2■■□□□ 1.14
COL13A1-206ENST00000456019 WNT10BO00744 389 aa22.19■■□□□ 1.14
COL13A1-206ENST00000456019 UBTFL1P0CB47 393 aaPredicted RBP22.19■■□□□ 1.14
COL13A1-206ENST00000456019 MAP2K2P36507 400 aa22.19■■□□□ 1.14
COL13A1-206ENST00000456019 FKBP1AP62942 108 aaKnown RBP22.19■■□□□ 1.14
COL13A1-206ENST00000456019 LRRC24Q50LG9 513 aa22.19■■□□□ 1.14
COL13A1-206ENST00000456019 METTL24Q5JXM2 366 aa22.19■■□□□ 1.14
COL13A1-206ENST00000456019 HDAC5Q9UQL6 1122 aa22.19■■□□□ 1.14
COL13A1-206ENST00000456019 HIBADHP31937 336 aaKnown RBP22.18■■□□□ 1.14
COL13A1-206ENST00000456019 CTCFP49711 727 aaPredicted RBP22.18■■□□□ 1.14
COL13A1-206ENST00000456019 HNRNPUQ00839 825 aaKnown RBP eCLIP22.18■■□□□ 1.14
COL13A1-206ENST00000456019 AOC2O75106 756 aa22.17■■□□□ 1.14
COL13A1-206ENST00000456019 SASH1O94885 1247 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms