RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 PI4KAP1Q8N8J0 262 aa24.06■■□□□ 1.44
MSH6-206ENST00000455383 GREM2Q9H772 168 aa24.06■■□□□ 1.44
MSH6-206ENST00000455383 CCT4P50991 539 aaKnown RBP24.04■■□□□ 1.44
MSH6-206ENST00000455383 NBPF9Q3BBW0 867 aa24.04■■□□□ 1.44
MSH6-206ENST00000455383 CTU1Q7Z7A3 348 aaKnown RBP24.04■■□□□ 1.44
MSH6-206ENST00000455383 H7C1W4 665 aa24.03■■□□□ 1.44
MSH6-206ENST00000455383 STRIP1Q5VSL9 837 aa24.03■■□□□ 1.44
MSH6-206ENST00000455383 MOB2Q70IA6 237 aa24.03■■□□□ 1.44
MSH6-206ENST00000455383 MYH3P11055 1940 aa24.03■■□□□ 1.44
MSH6-206ENST00000455383 NEURL1BA8MQ27 555 aa24.02■■□□□ 1.44
MSH6-206ENST00000455383 MMP14P50281 582 aa24.02■■□□□ 1.44
MSH6-206ENST00000455383 MXD3Q9BW11 206 aa24.02■■□□□ 1.44
MSH6-206ENST00000455383 COA1Q9GZY4 146 aa24.02■■□□□ 1.44
MSH6-206ENST00000455383 SCAF8Q9UPN6 1271 aaKnown RBP24.02■■□□□ 1.44
MSH6-206ENST00000455383 MYO3BQ8WXR4 1341 aa24.02■■□□□ 1.44
MSH6-206ENST00000455383 UBE2Q2LH0YL09 131 aa24.01■■□□□ 1.43
MSH6-206ENST00000455383 WNT10BO00744 389 aa24.01■■□□□ 1.43
MSH6-206ENST00000455383 NEXNQ0ZGT2 675 aa24.01■■□□□ 1.43
MSH6-206ENST00000455383 CWF19L2Q2TBE0 894 aaKnown RBP24.01■■□□□ 1.43
MSH6-206ENST00000455383 TXNRD3Q86VQ6 643 aa24.01■■□□□ 1.43
MSH6-206ENST00000455383 PLA2G12BQ9BX93 195 aa24.01■■□□□ 1.43
MSH6-206ENST00000455383 LEMD3Q9Y2U8 911 aa24.01■■□□□ 1.43
MSH6-206ENST00000455383 TNRC18O15417 2968 aaPredicted RBP24■■□□□ 1.43
MSH6-206ENST00000455383 PRAMEF18Q5VWM3 479 aa24■■□□□ 1.43
MSH6-206ENST00000455383 SPEF2Q9C093 1822 aa23.99■■□□□ 1.43
MSH6-206ENST00000455383 G2E3Q7L622 706 aa23.99■■□□□ 1.43
MSH6-206ENST00000455383 OGFOD1Q8N543 542 aa23.99■■□□□ 1.43
MSH6-206ENST00000455383 TSR2Q969E8 191 aaKnown RBP23.99■■□□□ 1.43
MSH6-206ENST00000455383 TM4SF4P48230 202 aa23.98■■□□□ 1.43
MSH6-206ENST00000455383 SOX10P56693 466 aa23.98■■□□□ 1.43
MSH6-206ENST00000455383 CCDC27Q2M243 656 aa23.98■■□□□ 1.43
MSH6-206ENST00000455383 UBE3BQ7Z3V4 1068 aa23.98■■□□□ 1.43
MSH6-206ENST00000455383 STK31Q9BXU1 1019 aa23.98■■□□□ 1.43
MSH6-206ENST00000455383 IGHMBP2P38935 993 aaKnown RBP23.97■■□□□ 1.43
MSH6-206ENST00000455383 CASP7P55210 303 aa23.97■■□□□ 1.43
MSH6-206ENST00000455383 NOM1Q5C9Z4 860 aaKnown RBP23.97■■□□□ 1.43
MSH6-206ENST00000455383 ZBED3Q96IU2 234 aaPredicted RBP23.97■■□□□ 1.43
MSH6-206ENST00000455383 ZNF804BA4D1E1 1349 aa23.96■■□□□ 1.43
MSH6-206ENST00000455383 CSF1RP07333 972 aa23.96■■□□□ 1.43
MSH6-206ENST00000455383 ANKRD2Q9GZV1 360 aa23.96■■□□□ 1.43
MSH6-206ENST00000455383 KLRK1P26718 216 aa23.95■■□□□ 1.42
MSH6-206ENST00000455383 GCKRQ14397 625 aa23.95■■□□□ 1.42
MSH6-206ENST00000455383 PKN2Q16513 984 aaKnown RBP23.95■■□□□ 1.42
MSH6-206ENST00000455383 TWISTNBQ3B726 338 aaPredicted RBP23.95■■□□□ 1.42
MSH6-206ENST00000455383 TTLL5Q6EMB2 1281 aa23.95■■□□□ 1.42
MSH6-206ENST00000455383 ZNF296Q8WUU4 475 aaPredicted RBP23.95■■□□□ 1.42
MSH6-206ENST00000455383 SASH1O94885 1247 aa23.94■■□□□ 1.42
MSH6-206ENST00000455383 TBC1D8O95759 1140 aa23.94■■□□□ 1.42
MSH6-206ENST00000455383 SLC4A2P04920 1241 aa23.94■■□□□ 1.42
MSH6-206ENST00000455383 ITGA6P23229 1130 aa23.94■■□□□ 1.42
MSH6-206ENST00000455383 NF2P35240 595 aa23.94■■□□□ 1.42
MSH6-206ENST00000455383 FBXW7Q969H0 707 aa23.94■■□□□ 1.42
MSH6-206ENST00000455383 HPS5Q9UPZ3 1129 aa23.94■■□□□ 1.42
MSH6-206ENST00000455383 PDE4DIPQ5VU43 2346 aa23.93■■□□□ 1.42
MSH6-206ENST00000455383 TTLL12Q14166 644 aaPredicted RBP23.93■■□□□ 1.42
MSH6-206ENST00000455383 APOBEC3FQ8IUX4 373 aaKnown RBP23.93■■□□□ 1.42
MSH6-206ENST00000455383 WWC1Q8IX03 1113 aa23.93■■□□□ 1.42
MSH6-206ENST00000455383 CFHR5Q9BXR6 569 aa23.93■■□□□ 1.42
MSH6-206ENST00000455383 IRS2Q9Y4H2 1338 aa23.92■■□□□ 1.42
MSH6-206ENST00000455383 PTPN12Q05209 780 aaKnown RBP23.92■■□□□ 1.42
MSH6-206ENST00000455383 LDLRAD1Q5T700 205 aa23.92■■□□□ 1.42
MSH6-206ENST00000455383 HDAC9Q9UKV0 1011 aa23.92■■□□□ 1.42
MSH6-206ENST00000455383 IL16Q14005 1332 aa23.91■■□□□ 1.42
MSH6-206ENST00000455383 GPR25O00155 361 aa23.91■■□□□ 1.42
MSH6-206ENST00000455383 GTF2IP78347 998 aa23.91■■□□□ 1.42
MSH6-206ENST00000455383 FLIIQ13045 1269 aa23.91■■□□□ 1.42
MSH6-206ENST00000455383 NCBP3Q53F19 620 aaKnown RBP23.91■■□□□ 1.42
MSH6-206ENST00000455383 ARMC9Q7Z3E5 817 aa23.91■■□□□ 1.42
MSH6-206ENST00000455383 KIAA0825Q8IV33 1275 aa23.91■■□□□ 1.42
MSH6-206ENST00000455383 CHRNDQ07001 517 aa23.9■■□□□ 1.42
MSH6-206ENST00000455383 C15orf52Q6ZUT6 534 aaKnown RBP23.9■■□□□ 1.42
MSH6-206ENST00000455383 MPHOSPH8Q99549 860 aa23.9■■□□□ 1.42
MSH6-206ENST00000455383 CD209Q9NNX6 404 aa23.9■■□□□ 1.42
MSH6-206ENST00000455383 COL1A1P02452 1464 aaPredicted RBP23.89■■□□□ 1.42
MSH6-206ENST00000455383 SREBF2Q12772 1141 aa23.89■■□□□ 1.41
MSH6-206ENST00000455383 CCDC184Q52MB2 194 aa23.89■■□□□ 1.41
MSH6-206ENST00000455383 LINS1Q8NG48 757 aa23.89■■□□□ 1.41
MSH6-206ENST00000455383 DNAAF4Q8WXU2 420 aa23.89■■□□□ 1.41
MSH6-206ENST00000455383 MYH16Q9H6N6 1097 aa23.89■■□□□ 1.41
MSH6-206ENST00000455383 MTMR14Q8NCE2 650 aa23.88■■□□□ 1.41
MSH6-206ENST00000455383 MKRN3Q13064 507 aaKnown RBP23.87■■□□□ 1.41
MSH6-206ENST00000455383 MAP3K11Q16584 847 aa23.87■■□□□ 1.41
MSH6-206ENST00000455383 SPRYD7Q5W111 196 aa23.87■■□□□ 1.41
MSH6-206ENST00000455383 CERS5Q8N5B7 392 aa23.87■■□□□ 1.41
MSH6-206ENST00000455383 FKBP5Q13451 457 aaPredicted RBP23.86■■□□□ 1.41
MSH6-206ENST00000455383 DEFB129Q9H1M3 183 aa23.86■■□□□ 1.41
MSH6-206ENST00000455383 R3HDMLQ9H3Y0 253 aa23.86■■□□□ 1.41
MSH6-206ENST00000455383 PCDH10Q9P2E7 1040 aa23.86■■□□□ 1.41
MSH6-206ENST00000455383 ANKRD18BA2A2Z9 1011 aa23.85■■□□□ 1.41
MSH6-206ENST00000455383 SNAP23O00161 211 aa23.85■■□□□ 1.41
MSH6-206ENST00000455383 KCNJ4P48050 445 aa23.85■■□□□ 1.41
MSH6-206ENST00000455383 FOXO4P98177 505 aa23.85■■□□□ 1.41
MSH6-206ENST00000455383 PRKG1Q13976 671 aa23.85■■□□□ 1.41
MSH6-206ENST00000455383 FBXO46Q6PJ61 603 aaPredicted RBP23.85■■□□□ 1.41
MSH6-206ENST00000455383 ANGEL1Q9UNK9 670 aaKnown RBP23.85■■□□□ 1.41
MSH6-206ENST00000455383 CACNA1FO60840 1977 aa23.84■■□□□ 1.41
MSH6-206ENST00000455383 SSC5DA1L4H1 1573 aa23.84■■□□□ 1.41
MSH6-206ENST00000455383 IL1R1P14778 569 aa23.84■■□□□ 1.41
MSH6-206ENST00000455383 FKBP1AP62942 108 aaKnown RBP23.84■■□□□ 1.41
MSH6-206ENST00000455383 DLGAP5Q15398 846 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms