RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 ZNRF3Q9ULT6 936 aa17.63■□□□□ 0.41
HMGXB4-204ENST00000455359 LTBP1Q14766 1721 aa17.62■□□□□ 0.41
HMGXB4-204ENST00000455359 TAF1P21675 1872 aa17.62■□□□□ 0.41
HMGXB4-204ENST00000455359 G3V3G9 751 aa17.62■□□□□ 0.41
HMGXB4-204ENST00000455359 TNNI3KQ59H18 835 aa17.62■□□□□ 0.41
HMGXB4-204ENST00000455359 DCAF8Q5TAQ9 597 aa17.62■□□□□ 0.41
HMGXB4-204ENST00000455359 CLASRPQ8N2M8 674 aaKnown RBP17.62■□□□□ 0.41
HMGXB4-204ENST00000455359 LRRCC1Q9C099 1032 aa17.62■□□□□ 0.41
HMGXB4-204ENST00000455359 FPGT-TNNI3KV9GXZ4 949 aa17.62■□□□□ 0.41
HMGXB4-204ENST00000455359 FER1L6Q2WGJ9 1857 aa17.61■□□□□ 0.41
HMGXB4-204ENST00000455359 A0A1B0GUL7 405 aa17.61■□□□□ 0.41
HMGXB4-204ENST00000455359 WTIPA6NIX2 430 aaPredicted RBP17.61■□□□□ 0.41
HMGXB4-204ENST00000455359 FZD9O00144 591 aa17.61■□□□□ 0.41
HMGXB4-204ENST00000455359 SNAP23O00161 211 aa17.61■□□□□ 0.41
HMGXB4-204ENST00000455359 RIMBP2O15034 1052 aa17.61■□□□□ 0.41
HMGXB4-204ENST00000455359 HIBADHP31937 336 aaKnown RBP17.61■□□□□ 0.41
HMGXB4-204ENST00000455359 FBXO33Q7Z6M2 555 aa17.61■□□□□ 0.41
HMGXB4-204ENST00000455359 SMC5Q8IY18 1101 aa17.61■□□□□ 0.41
HMGXB4-204ENST00000455359 UTRNP46939 3433 aa17.61■□□□□ 0.41
HMGXB4-204ENST00000455359 TXNRD3Q86VQ6 643 aa17.6■□□□□ 0.41
HMGXB4-204ENST00000455359 VPS37DQ86XT2 251 aa17.6■□□□□ 0.41
HMGXB4-204ENST00000455359 FAM84BQ96KN1 310 aaPredicted RBP17.6■□□□□ 0.41
HMGXB4-204ENST00000455359 GPR101Q96P66 508 aaPredicted RBP17.6■□□□□ 0.41
HMGXB4-204ENST00000455359 GNL3LQ9NVN8 582 aaKnown RBP17.6■□□□□ 0.41
HMGXB4-204ENST00000455359 IL1R1P14778 569 aa17.59■□□□□ 0.41
HMGXB4-204ENST00000455359 KLRK1P26718 216 aa17.59■□□□□ 0.41
HMGXB4-204ENST00000455359 TIMM10P62072 90 aa17.59■□□□□ 0.41
HMGXB4-204ENST00000455359 CD209Q9NNX6 404 aa17.59■□□□□ 0.41
HMGXB4-204ENST00000455359 ZBTB47Q9UFB7 747 aaPredicted RBP17.59■□□□□ 0.41
HMGXB4-204ENST00000455359 SEMA3EO15041 775 aa17.58■□□□□ 0.4
HMGXB4-204ENST00000455359 ECE2O60344 883 aa17.58■□□□□ 0.4
HMGXB4-204ENST00000455359 IGHDP01880 384 aa17.58■□□□□ 0.4
HMGXB4-204ENST00000455359 EIF6P56537 245 aaKnown RBP17.58■□□□□ 0.4
HMGXB4-204ENST00000455359 EAF2Q96CJ1 260 aaPredicted RBP17.58■□□□□ 0.4
HMGXB4-204ENST00000455359 XAGE2Q96GT9 111 aa17.58■□□□□ 0.4
HMGXB4-204ENST00000455359 NEUROD6Q96NK8 337 aa17.58■□□□□ 0.4
HMGXB4-204ENST00000455359 ZNF609O15014 1411 aa17.57■□□□□ 0.4
HMGXB4-204ENST00000455359 GYG1P46976 350 aa17.57■□□□□ 0.4
HMGXB4-204ENST00000455359 TNIP1Q15025 636 aa17.57■□□□□ 0.4
HMGXB4-204ENST00000455359 DOK7Q18PE1 504 aa17.57■□□□□ 0.4
HMGXB4-204ENST00000455359 TDRD7Q8NHU6 1098 aaKnown RBP17.57■□□□□ 0.4
HMGXB4-204ENST00000455359 DBNDD1Q9H9R9 158 aa17.57■□□□□ 0.4
HMGXB4-204ENST00000455359 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.57■□□□□ 0.4
HMGXB4-204ENST00000455359 CACNA1SQ13698 1873 aa17.57■□□□□ 0.4
HMGXB4-204ENST00000455359 APBB1O00213 710 aa17.56■□□□□ 0.4
HMGXB4-204ENST00000455359 IFIT2P09913 472 aaKnown RBP17.56■□□□□ 0.4
HMGXB4-204ENST00000455359 BCAMP50895 628 aa17.56■□□□□ 0.4
HMGXB4-204ENST00000455359 CCDC158Q5M9N0 1113 aa17.56■□□□□ 0.4
HMGXB4-204ENST00000455359 GORABQ5T7V8 394 aa17.56■□□□□ 0.4
HMGXB4-204ENST00000455359 CCDC102BQ68D86 513 aa17.56■□□□□ 0.4
HMGXB4-204ENST00000455359 DPY19L2Q6NUT2 758 aa17.56■□□□□ 0.4
HMGXB4-204ENST00000455359 AACSQ86V21 672 aa17.56■□□□□ 0.4
HMGXB4-204ENST00000455359 ZNF512BQ96KM6 892 aaPredicted RBP17.56■□□□□ 0.4
HMGXB4-204ENST00000455359 IL1RAPL2Q9NP60 686 aa17.56■□□□□ 0.4
HMGXB4-204ENST00000455359 YDJCA8MPS7 323 aa17.55■□□□□ 0.4
HMGXB4-204ENST00000455359 UQCRFS1P1P0C7P4 283 aa17.55■□□□□ 0.4
HMGXB4-204ENST00000455359 STRIP1Q5VSL9 837 aa17.55■□□□□ 0.4
HMGXB4-204ENST00000455359 GPC2Q8N158 579 aa17.55■□□□□ 0.4
HMGXB4-204ENST00000455359 PDS5AQ29RF7 1337 aaKnown RBP17.55■□□□□ 0.4
HMGXB4-204ENST00000455359 USP17L3A6NCW0 530 aa17.54■□□□□ 0.4
HMGXB4-204ENST00000455359 USP17L4A6NCW7 530 aa17.54■□□□□ 0.4
HMGXB4-204ENST00000455359 ADORA1P30542 326 aa17.54■□□□□ 0.4
HMGXB4-204ENST00000455359 CXCL9Q07325 125 aa17.54■□□□□ 0.4
HMGXB4-204ENST00000455359 CIAPIN1Q6FI81 312 aa17.54■□□□□ 0.4
HMGXB4-204ENST00000455359 USP17L1Q7RTZ2 530 aa17.54■□□□□ 0.4
HMGXB4-204ENST00000455359 DBNLQ9UJU6 430 aaKnown RBP17.54■□□□□ 0.4
HMGXB4-204ENST00000455359 FAM205AQ6ZU69 1335 aa17.54■□□□□ 0.4
HMGXB4-204ENST00000455359 GLTPD2A6NH11 291 aa17.53■□□□□ 0.4
HMGXB4-204ENST00000455359 VIL1P09327 827 aaKnown RBP17.53■□□□□ 0.4
HMGXB4-204ENST00000455359 MMP14P50281 582 aa17.53■□□□□ 0.4
HMGXB4-204ENST00000455359 FKBP1AP62942 108 aaKnown RBP17.53■□□□□ 0.4
HMGXB4-204ENST00000455359 ANKRD45Q5TZF3 282 aa17.53■□□□□ 0.4
HMGXB4-204ENST00000455359 DBNDD2Q9BQY9 259 aa17.53■□□□□ 0.4
HMGXB4-204ENST00000455359 DENND2AQ9ULE3 1009 aa17.53■□□□□ 0.4
HMGXB4-204ENST00000455359 MYO3BQ8WXR4 1341 aa17.53■□□□□ 0.4
HMGXB4-204ENST00000455359 COL4A5P29400 1685 aa17.53■□□□□ 0.4
HMGXB4-204ENST00000455359 SPEF2Q9C093 1822 aa17.53■□□□□ 0.4
HMGXB4-204ENST00000455359 FRAT2O75474 233 aaPredicted RBP17.52■□□□□ 0.4
HMGXB4-204ENST00000455359 RPS12P25398 132 aaKnown RBP17.52■□□□□ 0.4
HMGXB4-204ENST00000455359 ARID4AP29374 1257 aaPredicted RBP17.52■□□□□ 0.4
HMGXB4-204ENST00000455359 PHKA1P46020 1223 aa17.52■□□□□ 0.4
HMGXB4-204ENST00000455359 NUCB1Q02818 461 aa17.52■□□□□ 0.4
HMGXB4-204ENST00000455359 TTLL5Q6EMB2 1281 aa17.52■□□□□ 0.4
HMGXB4-204ENST00000455359 CENPQQ7L2Z9 268 aaPredicted RBP17.52■□□□□ 0.4
HMGXB4-204ENST00000455359 TBC1D22AQ8WUA7 517 aa17.52■□□□□ 0.4
HMGXB4-204ENST00000455359 GPATCH3Q96I76 525 aa17.52■□□□□ 0.4
HMGXB4-204ENST00000455359 CCDC136Q96JN2 1154 aa17.52■□□□□ 0.4
HMGXB4-204ENST00000455359 CCDC8Q9H0W5 538 aaPredicted RBP17.52■□□□□ 0.4
HMGXB4-204ENST00000455359 PPP4R2Q9NY27 417 aa17.52■□□□□ 0.4
HMGXB4-204ENST00000455359 SMARCA5O60264 1052 aaPredicted RBP17.51■□□□□ 0.39
HMGXB4-204ENST00000455359 IGSF3O75054 1194 aa17.51■□□□□ 0.39
HMGXB4-204ENST00000455359 RAD17O75943 681 aa17.51■□□□□ 0.39
HMGXB4-204ENST00000455359 TTC39AQ5SRH9 613 aa17.51■□□□□ 0.39
HMGXB4-204ENST00000455359 DACT2Q5SW24 774 aa17.51■□□□□ 0.39
HMGXB4-204ENST00000455359 AGBL3Q8NEM8 1001 aa17.51■□□□□ 0.39
HMGXB4-204ENST00000455359 WDR66Q8TBY9 1149 aa17.51■□□□□ 0.39
HMGXB4-204ENST00000455359 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.51■□□□□ 0.39
HMGXB4-204ENST00000455359 L3MBTL3Q96JM7 780 aaPredicted RBP17.51■□□□□ 0.39
HMGXB4-204ENST00000455359 KDM2BQ8NHM5 1336 aa17.51■□□□□ 0.39
HMGXB4-204ENST00000455359 ZNF541Q9H0D2 1346 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms