RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 IFNL1Q8IU54 200 aa13.56□□□□□ -0.24
USP41-202ENST00000454608 HYPKQ9NX55 129 aa13.56□□□□□ -0.24
USP41-202ENST00000454608 PTPN22Q9Y2R2 807 aa13.56□□□□□ -0.24
USP41-202ENST00000454608 MED23Q9ULK4 1368 aa13.56□□□□□ -0.24
USP41-202ENST00000454608 MKI67P46013 3256 aaKnown RBP13.56□□□□□ -0.24
USP41-202ENST00000454608 ECM29Q5VYK3 1845 aa13.55□□□□□ -0.24
USP41-202ENST00000454608 MYH3P11055 1940 aa13.55□□□□□ -0.24
USP41-202ENST00000454608 CHL1O00533 1208 aa13.55□□□□□ -0.24
USP41-202ENST00000454608 PDE8AO60658 829 aa13.55□□□□□ -0.24
USP41-202ENST00000454608 STRIP1Q5VSL9 837 aa13.55□□□□□ -0.24
USP41-202ENST00000454608 ANKRD18AQ8IVF6 992 aa13.55□□□□□ -0.24
USP41-202ENST00000454608 ARMC5Q96C12 935 aa13.55□□□□□ -0.24
USP41-202ENST00000454608 UNCXA6NJT0 531 aa13.54□□□□□ -0.24
USP41-202ENST00000454608 TMPOP42166 694 aaKnown RBP13.54□□□□□ -0.24
USP41-202ENST00000454608 MAP3K11Q16584 847 aa13.54□□□□□ -0.24
USP41-202ENST00000454608 DACT2Q5SW24 774 aa13.54□□□□□ -0.24
USP41-202ENST00000454608 OTUD7BQ6GQQ9 843 aa13.54□□□□□ -0.24
USP41-202ENST00000454608 ANGEL1Q9UNK9 670 aaKnown RBP13.54□□□□□ -0.24
USP41-202ENST00000454608 SPEF2Q9C093 1822 aa13.53□□□□□ -0.24
USP41-202ENST00000454608 PCCAP05165 728 aaPredicted RBP13.53□□□□□ -0.24
USP41-202ENST00000454608 PRKG1Q13976 671 aa13.53□□□□□ -0.24
USP41-202ENST00000454608 KRT24Q2M2I5 525 aa13.53□□□□□ -0.24
USP41-202ENST00000454608 CCDC191Q8NCU4 936 aa13.53□□□□□ -0.24
USP41-202ENST00000454608 SLC10A4Q96EP9 437 aa13.53□□□□□ -0.24
USP41-202ENST00000454608 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
USP41-202ENST00000454608 HTTP42858 3142 aa13.52□□□□□ -0.24
USP41-202ENST00000454608 PPP1R12BO60237 982 aaPredicted RBP13.52□□□□□ -0.25
USP41-202ENST00000454608 EN2P19622 333 aaPredicted RBP13.52□□□□□ -0.25
USP41-202ENST00000454608 GOLGA2Q08379 1002 aa13.52□□□□□ -0.25
USP41-202ENST00000454608 RIC3Q7Z5B4 369 aa13.52□□□□□ -0.25
USP41-202ENST00000454608 CDC5LQ99459 802 aaKnown RBP13.52□□□□□ -0.25
USP41-202ENST00000454608 COA1Q9GZY4 146 aa13.52□□□□□ -0.25
USP41-202ENST00000454608 EFCC1Q9HA90 598 aa13.52□□□□□ -0.25
USP41-202ENST00000454608 COLQQ9Y215 455 aaPredicted RBP13.52□□□□□ -0.25
USP41-202ENST00000454608 IGF2BP3O00425 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
USP41-202ENST00000454608 SASH1O94885 1247 aa13.51□□□□□ -0.25
USP41-202ENST00000454608 ARHGEF6Q15052 776 aa13.51□□□□□ -0.25
USP41-202ENST00000454608 WNK4Q96J92 1243 aa13.51□□□□□ -0.25
USP41-202ENST00000454608 PPP2R3BQ9Y5P8 575 aa13.51□□□□□ -0.25
USP41-202ENST00000454608 CENPFP49454 3210 aa13.51□□□□□ -0.25
USP41-202ENST00000454608 SP3Q02447 781 aa13.5□□□□□ -0.25
USP41-202ENST00000454608 NBPF11Q86T75 865 aa13.5□□□□□ -0.25
USP41-202ENST00000454608 CD99L2Q8TCZ2 262 aa13.5□□□□□ -0.25
USP41-202ENST00000454608 FBXW7Q969H0 707 aa13.5□□□□□ -0.25
USP41-202ENST00000454608 ZBED3Q96IU2 234 aaPredicted RBP13.5□□□□□ -0.25
USP41-202ENST00000454608 MXD3Q9BW11 206 aa13.5□□□□□ -0.25
USP41-202ENST00000454608 BSDC1Q9NW68 430 aaPredicted RBP13.5□□□□□ -0.25
USP41-202ENST00000454608 LAS1LQ9Y4W2 734 aaKnown RBP13.5□□□□□ -0.25
USP41-202ENST00000454608 CCT4P50991 539 aaKnown RBP13.49□□□□□ -0.25
USP41-202ENST00000454608 TTLL5Q6EMB2 1281 aa13.49□□□□□ -0.25
USP41-202ENST00000454608 MYD88Q99836 296 aa13.49□□□□□ -0.25
USP41-202ENST00000454608 DEFB129Q9H1M3 183 aa13.49□□□□□ -0.25
USP41-202ENST00000454608 CWC25Q9NXE8 425 aaPredicted RBP13.49□□□□□ -0.25
USP41-202ENST00000454608 MINPP1Q9UNW1 487 aa13.49□□□□□ -0.25
USP41-202ENST00000454608 LEMD3Q9Y2U8 911 aa13.49□□□□□ -0.25
USP41-202ENST00000454608 BRCA2P51587 3418 aa13.48□□□□□ -0.25
USP41-202ENST00000454608 CRHR2Q13324 411 aa13.48□□□□□ -0.25
USP41-202ENST00000454608 SUPT20HL1Q3ZLR7 823 aa13.48□□□□□ -0.25
USP41-202ENST00000454608 ZNF333Q96JL9 665 aa13.48□□□□□ -0.25
USP41-202ENST00000454608 CCDC85AQ96PX6 553 aaPredicted RBP13.48□□□□□ -0.25
USP41-202ENST00000454608 CEP290O15078 2479 aa13.47□□□□□ -0.25
USP41-202ENST00000454608 TESPA1A2RU30 521 aaPredicted RBP13.47□□□□□ -0.25
USP41-202ENST00000454608 IREB2P48200 963 aaKnown RBP13.47□□□□□ -0.25
USP41-202ENST00000454608 DLGAP5Q15398 846 aa13.47□□□□□ -0.25
USP41-202ENST00000454608 DUSP27Q5VZP5 1158 aa13.47□□□□□ -0.25
USP41-202ENST00000454608 KIAA0825Q8IV33 1275 aa13.47□□□□□ -0.25
USP41-202ENST00000454608 MTMR14Q8NCE2 650 aa13.47□□□□□ -0.25
USP41-202ENST00000454608 TRIOBPQ9H2D6 2365 aa13.47□□□□□ -0.25
USP41-202ENST00000454608 SSC5DA1L4H1 1573 aa13.46□□□□□ -0.25
USP41-202ENST00000454608 ZNF804BA4D1E1 1349 aa13.46□□□□□ -0.25
USP41-202ENST00000454608 MYO1BO43795 1136 aa13.46□□□□□ -0.25
USP41-202ENST00000454608 CTSWP56202 376 aa13.46□□□□□ -0.25
USP41-202ENST00000454608 NEUROD2Q15784 382 aa13.46□□□□□ -0.25
USP41-202ENST00000454608 SLC9C1Q4G0N8 1177 aa13.46□□□□□ -0.25
USP41-202ENST00000454608 ANKRD13AQ8IZ07 590 aa13.46□□□□□ -0.25
USP41-202ENST00000454608 CLMNQ96JQ2 1002 aa13.46□□□□□ -0.25
USP41-202ENST00000454608 FZD1Q9UP38 647 aa13.46□□□□□ -0.25
USP41-202ENST00000454608 WTIPA6NIX2 430 aaPredicted RBP13.45□□□□□ -0.26
USP41-202ENST00000454608 DDX58O95786 925 aaKnown RBP13.45□□□□□ -0.26
USP41-202ENST00000454608 SLC4A8Q2Y0W8 1093 aa13.45□□□□□ -0.26
USP41-202ENST00000454608 TTLL11Q8NHH1 800 aa13.45□□□□□ -0.26
USP41-202ENST00000454608 OTUD5Q96G74 571 aa13.45□□□□□ -0.26
USP41-202ENST00000454608 METTL22Q9BUU2 404 aaPredicted RBP13.45□□□□□ -0.26
USP41-202ENST00000454608 CHMP4AQ9BY43 222 aa13.45□□□□□ -0.26
USP41-202ENST00000454608 ANKRD2Q9GZV1 360 aa13.45□□□□□ -0.26
USP41-202ENST00000454608 PHAXQ9H814 394 aaKnown RBP13.45□□□□□ -0.26
USP41-202ENST00000454608 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
USP41-202ENST00000454608 OTOFQ9HC10 1997 aa13.45□□□□□ -0.26
USP41-202ENST00000454608 IGHMBP2P38935 993 aaKnown RBP13.44□□□□□ -0.26
USP41-202ENST00000454608 GTF2IP78347 998 aa13.44□□□□□ -0.26
USP41-202ENST00000454608 TXNRD3Q86VQ6 643 aa13.44□□□□□ -0.26
USP41-202ENST00000454608 JARID2Q92833 1246 aaPredicted RBP13.44□□□□□ -0.26
USP41-202ENST00000454608 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.44□□□□□ -0.26
USP41-202ENST00000454608 H0YGN5 161 aa13.43□□□□□ -0.26
USP41-202ENST00000454608 USP2O75604 605 aaPredicted RBP13.43□□□□□ -0.26
USP41-202ENST00000454608 PTPN18Q99952 460 aa13.43□□□□□ -0.26
USP41-202ENST00000454608 GREM2Q9H772 168 aa13.43□□□□□ -0.26
USP41-202ENST00000454608 ZFYVE28Q9HCC9 887 aa13.43□□□□□ -0.26
USP41-202ENST00000454608 PTCH2Q9Y6C5 1203 aa13.43□□□□□ -0.26
USP41-202ENST00000454608 GJA5P36382 358 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms