RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 USP48Q86UV5 1035 aa13.6□□□□□ -0.23
LMCD1-205ENST00000454244 FBXW7Q969H0 707 aa13.6□□□□□ -0.23
LMCD1-205ENST00000454244 GMLQ99445 158 aa13.6□□□□□ -0.23
LMCD1-205ENST00000454244 ZNF408Q9H9D4 720 aa13.6□□□□□ -0.23
LMCD1-205ENST00000454244 SMC4Q9NTJ3 1288 aa13.6□□□□□ -0.23
LMCD1-205ENST00000454244 MYH3P11055 1940 aa13.6□□□□□ -0.23
LMCD1-205ENST00000454244 ZNF280AP59817 542 aaPredicted RBP13.59□□□□□ -0.23
LMCD1-205ENST00000454244 DLK2Q6UY11 383 aa13.59□□□□□ -0.23
LMCD1-205ENST00000454244 LDHAL6AQ6ZMR3 332 aa13.59□□□□□ -0.23
LMCD1-205ENST00000454244 PAXIP1Q6ZW49 1069 aaPredicted RBP13.59□□□□□ -0.23
LMCD1-205ENST00000454244 KAZALD1Q96I82 304 aa13.59□□□□□ -0.23
LMCD1-205ENST00000454244 MXD3Q9BW11 206 aa13.59□□□□□ -0.23
LMCD1-205ENST00000454244 CNNM1Q9NRU3 951 aa13.59□□□□□ -0.23
LMCD1-205ENST00000454244 SCN9AQ15858 1988 aa13.59□□□□□ -0.23
LMCD1-205ENST00000454244 UTYO14607 1347 aa13.59□□□□□ -0.23
LMCD1-205ENST00000454244 ZNF609O15014 1411 aa13.58□□□□□ -0.24
LMCD1-205ENST00000454244 PLIN1O60240 522 aa13.58□□□□□ -0.24
LMCD1-205ENST00000454244 USP17L8P0C7I0 530 aa13.58□□□□□ -0.24
LMCD1-205ENST00000454244 DACT2Q5SW24 774 aa13.58□□□□□ -0.24
LMCD1-205ENST00000454244 KRT26Q7Z3Y9 468 aa13.58□□□□□ -0.24
LMCD1-205ENST00000454244 DCPSQ96C86 337 aaKnown RBP13.58□□□□□ -0.24
LMCD1-205ENST00000454244 GGA3Q9NZ52 723 aa13.58□□□□□ -0.24
LMCD1-205ENST00000454244 TLL2Q9Y6L7 1015 aa13.58□□□□□ -0.24
LMCD1-205ENST00000454244 ASTN2O75129 1339 aaPredicted RBP13.58□□□□□ -0.24
LMCD1-205ENST00000454244 WDR33Q9C0J8 1336 aaKnown RBP13.58□□□□□ -0.24
LMCD1-205ENST00000454244 ADM5C9JUS6 153 aa13.57□□□□□ -0.24
LMCD1-205ENST00000454244 CT47B1P0C2W7 299 aaPredicted RBP13.57□□□□□ -0.24
LMCD1-205ENST00000454244 GRM1Q13255 1194 aa13.57□□□□□ -0.24
LMCD1-205ENST00000454244 STRIP1Q5VSL9 837 aa13.57□□□□□ -0.24
LMCD1-205ENST00000454244 DIEXFQ68CQ4 756 aaKnown RBP13.57□□□□□ -0.24
LMCD1-205ENST00000454244 CYP4F22Q6NT55 531 aa13.57□□□□□ -0.24
LMCD1-205ENST00000454244 MIER1Q8N108 512 aa13.57□□□□□ -0.24
LMCD1-205ENST00000454244 CAPNS2Q96L46 248 aa13.57□□□□□ -0.24
LMCD1-205ENST00000454244 BICC1Q9H694 974 aaKnown RBP13.57□□□□□ -0.24
LMCD1-205ENST00000454244 CD209Q9NNX6 404 aa13.57□□□□□ -0.24
LMCD1-205ENST00000454244 SPEF2Q9C093 1822 aa13.57□□□□□ -0.24
LMCD1-205ENST00000454244 ECE1P42892 770 aa13.56□□□□□ -0.24
LMCD1-205ENST00000454244 GTF2IP78347 998 aa13.56□□□□□ -0.24
LMCD1-205ENST00000454244 SCARF1Q14162 830 aa13.56□□□□□ -0.24
LMCD1-205ENST00000454244 RABL6Q3YEC7 729 aaPredicted RBP13.56□□□□□ -0.24
LMCD1-205ENST00000454244 COL13A1Q5TAT6 717 aaPredicted RBP13.56□□□□□ -0.24
LMCD1-205ENST00000454244 TTLL5Q6EMB2 1281 aa13.56□□□□□ -0.24
LMCD1-205ENST00000454244 C15orf52Q6ZUT6 534 aaKnown RBP13.56□□□□□ -0.24
LMCD1-205ENST00000454244 ANKRD44Q8N8A2 993 aa13.56□□□□□ -0.24
LMCD1-205ENST00000454244 PUS3Q9BZE2 481 aaKnown RBP13.56□□□□□ -0.24
LMCD1-205ENST00000454244 USP44Q9H0E7 712 aa13.56□□□□□ -0.24
LMCD1-205ENST00000454244 MYOZ2Q9NPC6 264 aa13.56□□□□□ -0.24
LMCD1-205ENST00000454244 IRS2Q9Y4H2 1338 aa13.56□□□□□ -0.24
LMCD1-205ENST00000454244 IFFO2Q5TF58 517 aa13.55□□□□□ -0.24
LMCD1-205ENST00000454244 ANGEL2Q5VTE6 544 aaKnown RBP13.55□□□□□ -0.24
LMCD1-205ENST00000454244 SAPCD2Q86UD0 394 aa13.55□□□□□ -0.24
LMCD1-205ENST00000454244 SULF1Q8IWU6 871 aa13.55□□□□□ -0.24
LMCD1-205ENST00000454244 NOB1Q9ULX3 412 aaKnown RBP13.55□□□□□ -0.24
LMCD1-205ENST00000454244 MYO3BQ8WXR4 1341 aa13.55□□□□□ -0.24
LMCD1-205ENST00000454244 FOXN1O15353 648 aa13.54□□□□□ -0.24
LMCD1-205ENST00000454244 ZNF804AQ7Z570 1209 aa13.54□□□□□ -0.24
LMCD1-205ENST00000454244 OGFOD1Q8N543 542 aa13.54□□□□□ -0.24
LMCD1-205ENST00000454244 AIDAQ96BJ3 306 aa13.54□□□□□ -0.24
LMCD1-205ENST00000454244 WBP1LQ9NX94 342 aa13.54□□□□□ -0.24
LMCD1-205ENST00000454244 RARSP54136 660 aaKnown RBP13.53□□□□□ -0.24
LMCD1-205ENST00000454244 BRPF1P55201 1214 aaPredicted RBP13.53□□□□□ -0.24
LMCD1-205ENST00000454244 KIAA0825Q8IV33 1275 aa13.53□□□□□ -0.24
LMCD1-205ENST00000454244 API5Q9BZZ5 524 aaKnown RBP13.53□□□□□ -0.24
LMCD1-205ENST00000454244 GBA2Q9HCG7 927 aaPredicted RBP13.53□□□□□ -0.24
LMCD1-205ENST00000454244 RIPOR2Q9Y4F9 1068 aa13.53□□□□□ -0.24
LMCD1-205ENST00000454244 AOC2O75106 756 aa13.52□□□□□ -0.25
LMCD1-205ENST00000454244 IL1R1P14778 569 aa13.52□□□□□ -0.25
LMCD1-205ENST00000454244 HUNKP57058 714 aa13.52□□□□□ -0.25
LMCD1-205ENST00000454244 MAP2K1Q02750 393 aaPredicted RBP13.52□□□□□ -0.25
LMCD1-205ENST00000454244 UBE4AQ14139 1066 aa13.52□□□□□ -0.25
LMCD1-205ENST00000454244 NBPF9Q3BBW0 867 aa13.52□□□□□ -0.25
LMCD1-205ENST00000454244 LRRC24Q50LG9 513 aa13.52□□□□□ -0.25
LMCD1-205ENST00000454244 C2orf69Q8N8R5 385 aa13.52□□□□□ -0.25
LMCD1-205ENST00000454244 KLHDC4Q8TBB5 520 aa13.52□□□□□ -0.25
LMCD1-205ENST00000454244 CDCA5Q96FF9 252 aa13.52□□□□□ -0.25
LMCD1-205ENST00000454244 HHIPL1Q96JK4 782 aa13.52□□□□□ -0.25
LMCD1-205ENST00000454244 HDAC9Q9UKV0 1011 aa13.52□□□□□ -0.25
LMCD1-205ENST00000454244 SCAF8Q9UPN6 1271 aaKnown RBP13.52□□□□□ -0.25
LMCD1-205ENST00000454244 MROH5Q6ZUA9 1318 aa13.51□□□□□ -0.25
LMCD1-205ENST00000454244 PITPNM2Q9BZ72 1349 aa13.51□□□□□ -0.25
LMCD1-205ENST00000454244 WNT10BO00744 389 aa13.51□□□□□ -0.25
LMCD1-205ENST00000454244 SASH1O94885 1247 aa13.51□□□□□ -0.25
LMCD1-205ENST00000454244 CTCFP49711 727 aaPredicted RBP13.51□□□□□ -0.25
LMCD1-205ENST00000454244 METTL24Q5JXM2 366 aa13.51□□□□□ -0.25
LMCD1-205ENST00000454244 CERS5Q8N5B7 392 aa13.51□□□□□ -0.25
LMCD1-205ENST00000454244 JAG2Q9Y219 1238 aa13.51□□□□□ -0.25
LMCD1-205ENST00000454244 TRPM7Q96QT4 1865 aa13.5□□□□□ -0.25
LMCD1-205ENST00000454244 UBTFL1P0CB47 393 aaPredicted RBP13.5□□□□□ -0.25
LMCD1-205ENST00000454244 HIBADHP31937 336 aaKnown RBP13.5□□□□□ -0.25
LMCD1-205ENST00000454244 GYG1P46976 350 aa13.5□□□□□ -0.25
LMCD1-205ENST00000454244 MMP14P50281 582 aa13.5□□□□□ -0.25
LMCD1-205ENST00000454244 HNRNPUQ00839 825 aaKnown RBP eCLIP13.5□□□□□ -0.25
LMCD1-205ENST00000454244 PSME4Q14997 1843 aa13.5□□□□□ -0.25
LMCD1-205ENST00000454244 KIF16BQ96L93 1317 aa13.49□□□□□ -0.25
LMCD1-205ENST00000454244 F8W031 263 aaPredicted RBP13.49□□□□□ -0.25
LMCD1-205ENST00000454244 MAP2K2P36507 400 aa13.49□□□□□ -0.25
LMCD1-205ENST00000454244 RFX5P48382 616 aaPredicted RBP13.49□□□□□ -0.25
LMCD1-205ENST00000454244 FKBP1AP62942 108 aaKnown RBP13.49□□□□□ -0.25
LMCD1-205ENST00000454244 PRAMEF18Q5VWM3 479 aa13.49□□□□□ -0.25
LMCD1-205ENST00000454244 TNS4Q8IZW8 715 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms