RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 VEGFBP49765 207 aa13.46□□□□□ -0.25
DDX39A-203ENST00000454233 DCPSQ96C86 337 aaKnown RBP13.46□□□□□ -0.25
DDX39A-203ENST00000454233 CNNM1Q9NRU3 951 aa13.46□□□□□ -0.25
DDX39A-203ENST00000454233 TRPM7Q96QT4 1865 aa13.46□□□□□ -0.26
DDX39A-203ENST00000454233 ZNF609O15014 1411 aa13.46□□□□□ -0.26
DDX39A-203ENST00000454233 TAF5LO75529 589 aa13.45□□□□□ -0.26
DDX39A-203ENST00000454233 EGFRP00533 1210 aa13.45□□□□□ -0.26
DDX39A-203ENST00000454233 USP17L8P0C7I0 530 aa13.45□□□□□ -0.26
DDX39A-203ENST00000454233 ZNF280AP59817 542 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-203ENST00000454233 STRIP1Q5VSL9 837 aa13.45□□□□□ -0.26
DDX39A-203ENST00000454233 CST9Q5W186 159 aa13.45□□□□□ -0.26
DDX39A-203ENST00000454233 PAXIP1Q6ZW49 1069 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-203ENST00000454233 KRT26Q7Z3Y9 468 aa13.45□□□□□ -0.26
DDX39A-203ENST00000454233 USP48Q86UV5 1035 aa13.45□□□□□ -0.26
DDX39A-203ENST00000454233 TXNRD3Q86VQ6 643 aa13.45□□□□□ -0.26
DDX39A-203ENST00000454233 HELBQ8NG08 1087 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-203ENST00000454233 ZNF594Q96JF6 807 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-203ENST00000454233 ZNF408Q9H9D4 720 aa13.45□□□□□ -0.26
DDX39A-203ENST00000454233 MYO3BQ8WXR4 1341 aa13.44□□□□□ -0.26
DDX39A-203ENST00000454233 PSME4Q14997 1843 aa13.44□□□□□ -0.26
DDX39A-203ENST00000454233 PLIN1O60240 522 aa13.44□□□□□ -0.26
DDX39A-203ENST00000454233 KLRK1P26718 216 aa13.44□□□□□ -0.26
DDX39A-203ENST00000454233 MIER1Q8N108 512 aa13.44□□□□□ -0.26
DDX39A-203ENST00000454233 OGFOD1Q8N543 542 aa13.44□□□□□ -0.26
DDX39A-203ENST00000454233 GMLQ99445 158 aa13.44□□□□□ -0.26
DDX39A-203ENST00000454233 BICC1Q9H694 974 aaKnown RBP13.44□□□□□ -0.26
DDX39A-203ENST00000454233 TLL2Q9Y6L7 1015 aa13.44□□□□□ -0.26
DDX39A-203ENST00000454233 ECE1P42892 770 aa13.43□□□□□ -0.26
DDX39A-203ENST00000454233 DACT2Q5SW24 774 aa13.43□□□□□ -0.26
DDX39A-203ENST00000454233 TTLL5Q6EMB2 1281 aa13.43□□□□□ -0.26
DDX39A-203ENST00000454233 C15orf52Q6ZUT6 534 aaKnown RBP13.43□□□□□ -0.26
DDX39A-203ENST00000454233 ZNF804AQ7Z570 1209 aa13.43□□□□□ -0.26
DDX39A-203ENST00000454233 SULF1Q8IWU6 871 aa13.43□□□□□ -0.26
DDX39A-203ENST00000454233 KAZALD1Q96I82 304 aa13.43□□□□□ -0.26
DDX39A-203ENST00000454233 API5Q9BZZ5 524 aaKnown RBP13.43□□□□□ -0.26
DDX39A-203ENST00000454233 MYOZ2Q9NPC6 264 aa13.43□□□□□ -0.26
DDX39A-203ENST00000454233 GGA3Q9NZ52 723 aa13.43□□□□□ -0.26
DDX39A-203ENST00000454233 WDR33Q9C0J8 1336 aaKnown RBP13.42□□□□□ -0.26
DDX39A-203ENST00000454233 SNAP23O00161 211 aa13.42□□□□□ -0.26
DDX39A-203ENST00000454233 MMP14P50281 582 aa13.42□□□□□ -0.26
DDX39A-203ENST00000454233 GTF2IP78347 998 aa13.42□□□□□ -0.26
DDX39A-203ENST00000454233 SCARF1Q14162 830 aa13.42□□□□□ -0.26
DDX39A-203ENST00000454233 RABL6Q3YEC7 729 aaPredicted RBP13.42□□□□□ -0.26
DDX39A-203ENST00000454233 AIDAQ96BJ3 306 aa13.42□□□□□ -0.26
DDX39A-203ENST00000454233 USP44Q9H0E7 712 aa13.42□□□□□ -0.26
DDX39A-203ENST00000454233 CD209Q9NNX6 404 aa13.42□□□□□ -0.26
DDX39A-203ENST00000454233 HDAC9Q9UKV0 1011 aa13.42□□□□□ -0.26
DDX39A-203ENST00000454233 NOB1Q9ULX3 412 aaKnown RBP13.42□□□□□ -0.26
DDX39A-203ENST00000454233 BRPF1P55201 1214 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-203ENST00000454233 GRM1Q13255 1194 aa13.41□□□□□ -0.26
DDX39A-203ENST00000454233 UBE4AQ14139 1066 aa13.41□□□□□ -0.26
DDX39A-203ENST00000454233 SAPCD2Q86UD0 394 aa13.41□□□□□ -0.26
DDX39A-203ENST00000454233 ANKRD44Q8N8A2 993 aa13.41□□□□□ -0.26
DDX39A-203ENST00000454233 CAPNS2Q96L46 248 aa13.41□□□□□ -0.26
DDX39A-203ENST00000454233 MXD3Q9BW11 206 aa13.41□□□□□ -0.26
DDX39A-203ENST00000454233 MROH5Q6ZUA9 1318 aa13.4□□□□□ -0.26
DDX39A-203ENST00000454233 KIF16BQ96L93 1317 aa13.4□□□□□ -0.26
DDX39A-203ENST00000454233 ADM5C9JUS6 153 aa13.4□□□□□ -0.26
DDX39A-203ENST00000454233 RARSP54136 660 aaKnown RBP13.4□□□□□ -0.26
DDX39A-203ENST00000454233 ANGEL2Q5VTE6 544 aaKnown RBP13.4□□□□□ -0.26
DDX39A-203ENST00000454233 CYP4F22Q6NT55 531 aa13.4□□□□□ -0.26
DDX39A-203ENST00000454233 HHIPL1Q96JK4 782 aa13.4□□□□□ -0.26
DDX39A-203ENST00000454233 PUS3Q9BZE2 481 aaKnown RBP13.4□□□□□ -0.26
DDX39A-203ENST00000454233 HDAC5Q9UQL6 1122 aa13.4□□□□□ -0.26
DDX39A-203ENST00000454233 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
DDX39A-203ENST00000454233 PITPNM2Q9BZ72 1349 aa13.39□□□□□ -0.27
DDX39A-203ENST00000454233 IRS2Q9Y4H2 1338 aa13.39□□□□□ -0.27
DDX39A-203ENST00000454233 UBTFL1P0CB47 393 aaPredicted RBP13.39□□□□□ -0.27
DDX39A-203ENST00000454233 IL1R1P14778 569 aa13.39□□□□□ -0.27
DDX39A-203ENST00000454233 HNRNPUQ00839 825 aaKnown RBP eCLIP13.39□□□□□ -0.27
DDX39A-203ENST00000454233 MAP2K1Q02750 393 aaPredicted RBP13.39□□□□□ -0.27
DDX39A-203ENST00000454233 METTL24Q5JXM2 366 aa13.39□□□□□ -0.27
DDX39A-203ENST00000454233 KIAA0825Q8IV33 1275 aa13.39□□□□□ -0.27
DDX39A-203ENST00000454233 C2orf69Q8N8R5 385 aa13.39□□□□□ -0.27
DDX39A-203ENST00000454233 RIPOR2Q9Y4F9 1068 aa13.39□□□□□ -0.27
DDX39A-203ENST00000454233 A0A1B0GUL6 1792 aa13.39□□□□□ -0.27
DDX39A-203ENST00000454233 POLR2AP24928 1970 aaKnown RBP13.39□□□□□ -0.27
DDX39A-203ENST00000454233 IPO8O15397 1037 aaKnown RBP13.38□□□□□ -0.27
DDX39A-203ENST00000454233 HUNKP57058 714 aa13.38□□□□□ -0.27
DDX39A-203ENST00000454233 IFFO2Q5TF58 517 aa13.38□□□□□ -0.27
DDX39A-203ENST00000454233 DLK2Q6UY11 383 aa13.38□□□□□ -0.27
DDX39A-203ENST00000454233 ARHGAP45Q92619 1136 aa13.38□□□□□ -0.27
DDX39A-203ENST00000454233 GBA2Q9HCG7 927 aaPredicted RBP13.38□□□□□ -0.27
DDX39A-203ENST00000454233 WBP1LQ9NX94 342 aa13.38□□□□□ -0.27
DDX39A-203ENST00000454233 FOXN1O15353 648 aa13.37□□□□□ -0.27
DDX39A-203ENST00000454233 HIBADHP31937 336 aaKnown RBP13.37□□□□□ -0.27
DDX39A-203ENST00000454233 MAP2K2P36507 400 aa13.37□□□□□ -0.27
DDX39A-203ENST00000454233 CTCFP49711 727 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-203ENST00000454233 FKBP1AP62942 108 aaKnown RBP13.37□□□□□ -0.27
DDX39A-203ENST00000454233 NBPF9Q3BBW0 867 aa13.37□□□□□ -0.27
DDX39A-203ENST00000454233 LRRC24Q50LG9 513 aa13.37□□□□□ -0.27
DDX39A-203ENST00000454233 COL13A1Q5TAT6 717 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-203ENST00000454233 CDCA5Q96FF9 252 aa13.37□□□□□ -0.27
DDX39A-203ENST00000454233 BEGAINQ9BUH8 593 aa13.37□□□□□ -0.27
DDX39A-203ENST00000454233 WNT10BO00744 389 aa13.36□□□□□ -0.27
DDX39A-203ENST00000454233 SASH1O94885 1247 aa13.36□□□□□ -0.27
DDX39A-203ENST00000454233 GYG1P46976 350 aa13.36□□□□□ -0.27
DDX39A-203ENST00000454233 VPS37DQ86XT2 251 aa13.36□□□□□ -0.27
DDX39A-203ENST00000454233 KLHDC4Q8TBB5 520 aa13.36□□□□□ -0.27
DDX39A-203ENST00000454233 ZNF646O15015 1829 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms