RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 TWISTNBQ3B726 338 aaPredicted RBP30.41■■■□□ 2.46
LYSMD2-202ENST00000454181 NEURL1BA8MQ27 555 aa30.4■■■□□ 2.46
LYSMD2-202ENST00000454181 SLC4A2P04920 1241 aa30.4■■■□□ 2.46
LYSMD2-202ENST00000454181 CCT4P50991 539 aaKnown RBP30.4■■■□□ 2.46
LYSMD2-202ENST00000454181 UBE3BQ7Z3V4 1068 aa30.4■■■□□ 2.46
LYSMD2-202ENST00000454181 CSRNP1Q96S65 589 aa30.39■■■□□ 2.46
LYSMD2-202ENST00000454181 WTIPA6NIX2 430 aaPredicted RBP30.38■■■□□ 2.45
LYSMD2-202ENST00000454181 COA1Q9GZY4 146 aa30.38■■■□□ 2.45
LYSMD2-202ENST00000454181 LEMD3Q9Y2U8 911 aa30.38■■■□□ 2.45
LYSMD2-202ENST00000454181 H7C1W4 665 aa30.37■■■□□ 2.45
LYSMD2-202ENST00000454181 CCDC27Q2M243 656 aa30.37■■■□□ 2.45
LYSMD2-202ENST00000454181 MYO3BQ8WXR4 1341 aa30.37■■■□□ 2.45
LYSMD2-202ENST00000454181 TTLL12Q14166 644 aaPredicted RBP30.36■■■□□ 2.45
LYSMD2-202ENST00000454181 STRIP1Q5VSL9 837 aa30.36■■■□□ 2.45
LYSMD2-202ENST00000454181 G2E3Q7L622 706 aa30.36■■■□□ 2.45
LYSMD2-202ENST00000454181 RASAL3Q86YV0 1011 aa30.36■■■□□ 2.45
LYSMD2-202ENST00000454181 WWC1Q8IX03 1113 aa30.36■■■□□ 2.45
LYSMD2-202ENST00000454181 MPHOSPH8Q99549 860 aa30.36■■■□□ 2.45
LYSMD2-202ENST00000454181 ANKRD2Q9GZV1 360 aa30.36■■■□□ 2.45
LYSMD2-202ENST00000454181 NF2P35240 595 aa30.35■■■□□ 2.45
LYSMD2-202ENST00000454181 NBPF9Q3BBW0 867 aa30.35■■■□□ 2.45
LYSMD2-202ENST00000454181 DACT2Q5SW24 774 aa30.35■■■□□ 2.45
LYSMD2-202ENST00000454181 MYH16Q9H6N6 1097 aa30.35■■■□□ 2.45
LYSMD2-202ENST00000454181 MXD3Q9BW11 206 aa30.34■■■□□ 2.45
LYSMD2-202ENST00000454181 SCAF8Q9UPN6 1271 aaKnown RBP30.34■■■□□ 2.45
LYSMD2-202ENST00000454181 ZNF804BA4D1E1 1349 aa30.33■■■□□ 2.45
LYSMD2-202ENST00000454181 ITGA6P23229 1130 aa30.33■■■□□ 2.45
LYSMD2-202ENST00000454181 KCNJ4P48050 445 aa30.33■■■□□ 2.45
LYSMD2-202ENST00000454181 MMP14P50281 582 aa30.33■■■□□ 2.45
LYSMD2-202ENST00000454181 GCKRQ14397 625 aa30.33■■■□□ 2.45
LYSMD2-202ENST00000454181 UBE2Q2LH0YL09 131 aa30.32■■■□□ 2.44
LYSMD2-202ENST00000454181 FLIIQ13045 1269 aa30.32■■■□□ 2.44
LYSMD2-202ENST00000454181 FKBP5Q13451 457 aaPredicted RBP30.32■■■□□ 2.44
LYSMD2-202ENST00000454181 TTLL5Q6EMB2 1281 aa30.32■■■□□ 2.44
LYSMD2-202ENST00000454181 HDAC9Q9UKV0 1011 aa30.32■■■□□ 2.44
LYSMD2-202ENST00000454181 PSME4Q14997 1843 aa30.31■■■□□ 2.44
LYSMD2-202ENST00000454181 PRAMEF18Q5VWM3 479 aa30.31■■■□□ 2.44
LYSMD2-202ENST00000454181 MOB2Q70IA6 237 aa30.31■■■□□ 2.44
LYSMD2-202ENST00000454181 PLA2G12BQ9BX93 195 aa30.31■■■□□ 2.44
LYSMD2-202ENST00000454181 IL16Q14005 1332 aa30.3■■■□□ 2.44
LYSMD2-202ENST00000454181 WNT10BO00744 389 aa30.3■■■□□ 2.44
LYSMD2-202ENST00000454181 DNAAF4Q8WXU2 420 aa30.3■■■□□ 2.44
LYSMD2-202ENST00000454181 PAPPA2Q9BXP8 1791 aa30.3■■■□□ 2.44
LYSMD2-202ENST00000454181 TXNRD3Q86VQ6 643 aa30.29■■■□□ 2.44
LYSMD2-202ENST00000454181 AKAP11Q9UKA4 1901 aa30.29■■■□□ 2.44
LYSMD2-202ENST00000454181 CCDC184Q52MB2 194 aa30.28■■■□□ 2.44
LYSMD2-202ENST00000454181 LINS1Q8NG48 757 aa30.28■■■□□ 2.44
LYSMD2-202ENST00000454181 MYH3P11055 1940 aa30.28■■■□□ 2.44
LYSMD2-202ENST00000454181 SASH1O94885 1247 aa30.27■■■□□ 2.44
LYSMD2-202ENST00000454181 CTU1Q7Z7A3 348 aaKnown RBP30.27■■■□□ 2.44
LYSMD2-202ENST00000454181 KIAA0825Q8IV33 1275 aa30.27■■■□□ 2.44
LYSMD2-202ENST00000454181 ANKRD18BA2A2Z9 1011 aa30.26■■■□□ 2.43
LYSMD2-202ENST00000454181 CSF1RP07333 972 aa30.26■■■□□ 2.43
LYSMD2-202ENST00000454181 GTF2IP78347 998 aa30.26■■■□□ 2.43
LYSMD2-202ENST00000454181 APOBEC3FQ8IUX4 373 aaKnown RBP30.26■■■□□ 2.43
LYSMD2-202ENST00000454181 SPEF2Q9C093 1822 aa30.25■■■□□ 2.43
LYSMD2-202ENST00000454181 ARMC9Q7Z3E5 817 aa30.25■■■□□ 2.43
LYSMD2-202ENST00000454181 CHRNDQ07001 517 aa30.24■■■□□ 2.43
LYSMD2-202ENST00000454181 KLRK1P26718 216 aa30.23■■■□□ 2.43
LYSMD2-202ENST00000454181 CASP7P55210 303 aa30.23■■■□□ 2.43
LYSMD2-202ENST00000454181 NCBP3Q53F19 620 aaKnown RBP30.23■■■□□ 2.43
LYSMD2-202ENST00000454181 CHMP3Q9Y3E7 222 aa30.23■■■□□ 2.43
LYSMD2-202ENST00000454181 FANCIQ9NVI1 1328 aa30.22■■■□□ 2.43
LYSMD2-202ENST00000454181 MKRN3Q13064 507 aaKnown RBP30.21■■■□□ 2.43
LYSMD2-202ENST00000454181 IFIT5Q13325 482 aaKnown RBP30.21■■■□□ 2.43
LYSMD2-202ENST00000454181 PRKG1Q13976 671 aa30.21■■■□□ 2.43
LYSMD2-202ENST00000454181 CD209Q9NNX6 404 aa30.21■■■□□ 2.43
LYSMD2-202ENST00000454181 SALL2Q9Y467 1007 aaPredicted RBP30.21■■■□□ 2.43
LYSMD2-202ENST00000454181 TBC1D8O95759 1140 aa30.2■■■□□ 2.43
LYSMD2-202ENST00000454181 SOX10P56693 466 aa30.2■■■□□ 2.43
LYSMD2-202ENST00000454181 SREBF2Q12772 1141 aa30.2■■■□□ 2.43
LYSMD2-202ENST00000454181 DLGAP5Q15398 846 aa30.2■■■□□ 2.43
LYSMD2-202ENST00000454181 MRS2Q9HD23 443 aa30.2■■■□□ 2.43
LYSMD2-202ENST00000454181 TM4SF4P48230 202 aa30.19■■■□□ 2.42
LYSMD2-202ENST00000454181 VAMP4O75379 141 aa30.18■■■□□ 2.42
LYSMD2-202ENST00000454181 PKN2Q16513 984 aaKnown RBP30.18■■■□□ 2.42
LYSMD2-202ENST00000454181 WDR63Q8IWG1 891 aa30.18■■■□□ 2.42
LYSMD2-202ENST00000454181 HELBQ8NG08 1087 aaPredicted RBP30.18■■■□□ 2.42
LYSMD2-202ENST00000454181 TAF5LO75529 589 aa30.17■■■□□ 2.42
LYSMD2-202ENST00000454181 PTPN12Q05209 780 aaKnown RBP30.17■■■□□ 2.42
LYSMD2-202ENST00000454181 ZNF804AQ7Z570 1209 aa30.17■■■□□ 2.42
LYSMD2-202ENST00000454181 ZNF296Q8WUU4 475 aaPredicted RBP30.17■■■□□ 2.42
LYSMD2-202ENST00000454181 ANGEL1Q9UNK9 670 aaKnown RBP30.17■■■□□ 2.42
LYSMD2-202ENST00000454181 EXOSC9Q06265 439 aaKnown RBP30.16■■■□□ 2.42
LYSMD2-202ENST00000454181 TAF7LQ5H9L4 462 aa30.16■■■□□ 2.42
LYSMD2-202ENST00000454181 MYO1BO43795 1136 aa30.15■■■□□ 2.42
LYSMD2-202ENST00000454181 SLC34A2O95436 690 aa30.15■■■□□ 2.42
LYSMD2-202ENST00000454181 DEFB129Q9H1M3 183 aa30.15■■■□□ 2.42
LYSMD2-202ENST00000454181 SNAP23O00161 211 aa30.14■■■□□ 2.42
LYSMD2-202ENST00000454181 C15orf52Q6ZUT6 534 aaKnown RBP30.14■■■□□ 2.42
LYSMD2-202ENST00000454181 ZBED3Q96IU2 234 aaPredicted RBP30.14■■■□□ 2.42
LYSMD2-202ENST00000454181 F6X3S4 739 aa30.13■■■□□ 2.41
LYSMD2-202ENST00000454181 GPR25O00155 361 aa30.13■■■□□ 2.41
LYSMD2-202ENST00000454181 FOXO4P98177 505 aa30.13■■■□□ 2.41
LYSMD2-202ENST00000454181 CCDC57Q2TAC2 916 aa30.13■■■□□ 2.41
LYSMD2-202ENST00000454181 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.13■■■□□ 2.41
LYSMD2-202ENST00000454181 HPS5Q9UPZ3 1129 aa30.13■■■□□ 2.41
LYSMD2-202ENST00000454181 F8W031 263 aaPredicted RBP30.12■■■□□ 2.41
LYSMD2-202ENST00000454181 LMBR1LQ6UX01 489 aa30.12■■■□□ 2.41
LYSMD2-202ENST00000454181 SLC10A4Q96EP9 437 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms