RNA–Protein interactions for RNA: ENST00000453933.5

HMG20B-206, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-206ENST00000453933 METTL22Q9BUU2 404 aaPredicted RBP28.15■■■□□ 2.1
HMG20B-206ENST00000453933 R3HDMLQ9H3Y0 253 aa28.15■■■□□ 2.1
HMG20B-206ENST00000453933 FBXO46Q6PJ61 603 aaPredicted RBP28.14■■■□□ 2.1
HMG20B-206ENST00000453933 OGFOD1Q8N543 542 aa28.14■■■□□ 2.1
HMG20B-206ENST00000453933 MINPP1Q9UNW1 487 aa28.14■■■□□ 2.1
HMG20B-206ENST00000453933 PTPN12Q05209 780 aaKnown RBP28.13■■■□□ 2.09
HMG20B-206ENST00000453933 PSME4Q14997 1843 aa28.13■■■□□ 2.09
HMG20B-206ENST00000453933 MED23Q9ULK4 1368 aa28.12■■■□□ 2.09
HMG20B-206ENST00000453933 NF2P35240 595 aa28.12■■■□□ 2.09
HMG20B-206ENST00000453933 FBXW7Q969H0 707 aa28.12■■■□□ 2.09
HMG20B-206ENST00000453933 CDC5LQ99459 802 aaKnown RBP28.12■■■□□ 2.09
HMG20B-206ENST00000453933 SASH1O94885 1247 aa28.11■■■□□ 2.09
HMG20B-206ENST00000453933 CTSWP56202 376 aa28.11■■■□□ 2.09
HMG20B-206ENST00000453933 PRKG1Q13976 671 aa28.11■■■□□ 2.09
HMG20B-206ENST00000453933 STRIP1Q5VSL9 837 aa28.11■■■□□ 2.09
HMG20B-206ENST00000453933 TTLL11Q8NHH1 800 aa28.11■■■□□ 2.09
HMG20B-206ENST00000453933 BSDC1Q9NW68 430 aaPredicted RBP28.11■■■□□ 2.09
HMG20B-206ENST00000453933 FKTNO75072 461 aa28.1■■■□□ 2.09
HMG20B-206ENST00000453933 CCT4P50991 539 aaKnown RBP28.1■■■□□ 2.09
HMG20B-206ENST00000453933 SREBF2Q12772 1141 aa28.1■■■□□ 2.09
HMG20B-206ENST00000453933 TXNRD3Q86VQ6 643 aa28.1■■■□□ 2.09
HMG20B-206ENST00000453933 C8orf58Q8NAV2 365 aa28.1■■■□□ 2.09
HMG20B-206ENST00000453933 CFHR5Q9BXR6 569 aa28.1■■■□□ 2.09
HMG20B-206ENST00000453933 GREM2Q9H772 168 aa28.1■■■□□ 2.09
HMG20B-206ENST00000453933 MAP3K2Q9Y2U5 619 aa28.09■■■□□ 2.09
HMG20B-206ENST00000453933 DDX58O95786 925 aaKnown RBP28.08■■■□□ 2.09
HMG20B-206ENST00000453933 LDLRAD1Q5T700 205 aa28.08■■■□□ 2.09
HMG20B-206ENST00000453933 ARMC9Q7Z3E5 817 aa28.08■■■□□ 2.09
HMG20B-206ENST00000453933 COA1Q9GZY4 146 aa28.08■■■□□ 2.09
HMG20B-206ENST00000453933 IFT57Q9NWB7 429 aa28.08■■■□□ 2.09
HMG20B-206ENST00000453933 MYO3BQ8WXR4 1341 aa28.08■■■□□ 2.09
HMG20B-206ENST00000453933 IGKV5-2P06315 115 aa28.07■■■□□ 2.08
HMG20B-206ENST00000453933 GNAI1P63096 354 aa28.06■■■□□ 2.08
HMG20B-206ENST00000453933 SPRYD7Q5W111 196 aa28.06■■■□□ 2.08
HMG20B-206ENST00000453933 FZD1Q9UP38 647 aa28.06■■■□□ 2.08
HMG20B-206ENST00000453933 KIAA0825Q8IV33 1275 aa28.05■■■□□ 2.08
HMG20B-206ENST00000453933 TTLL5Q6EMB2 1281 aa28.04■■■□□ 2.08
HMG20B-206ENST00000453933 ZBED3Q96IU2 234 aaPredicted RBP28.04■■■□□ 2.08
HMG20B-206ENST00000453933 ANGEL1Q9UNK9 670 aaKnown RBP28.04■■■□□ 2.08
HMG20B-206ENST00000453933 PI4KAP2A4QPH2 592 aa28.03■■■□□ 2.08
HMG20B-206ENST00000453933 KLRK1P26718 216 aa28.03■■■□□ 2.08
HMG20B-206ENST00000453933 MMP14P50281 582 aa28.03■■■□□ 2.08
HMG20B-206ENST00000453933 CCDC30Q5VVM6 783 aa28.03■■■□□ 2.08
HMG20B-206ENST00000453933 KSR2Q6VAB6 950 aa28.03■■■□□ 2.08
HMG20B-206ENST00000453933 APOBEC3FQ8IUX4 373 aaKnown RBP28.03■■■□□ 2.08
HMG20B-206ENST00000453933 PI4KAP1Q8N8J0 262 aa28.03■■■□□ 2.08
HMG20B-206ENST00000453933 LEMD3Q9Y2U8 911 aa28.03■■■□□ 2.08
HMG20B-206ENST00000453933 APAF1O14727 1248 aa28.02■■■□□ 2.08
HMG20B-206ENST00000453933 ALDH1A1P00352 501 aa28.01■■■□□ 2.07
HMG20B-206ENST00000453933 CWF19L2Q2TBE0 894 aaKnown RBP28.01■■■□□ 2.07
HMG20B-206ENST00000453933 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.01■■■□□ 2.07
HMG20B-206ENST00000453933 ZNF804BA4D1E1 1349 aa28■■■□□ 2.07
HMG20B-206ENST00000453933 ZNF646O15015 1829 aaPredicted RBP28■■■□□ 2.07
HMG20B-206ENST00000453933 GTF2IP78347 998 aa28■■■□□ 2.07
HMG20B-206ENST00000453933 TSPYL6Q8N831 410 aa28■■■□□ 2.07
HMG20B-206ENST00000453933 SLC10A4Q96EP9 437 aa28■■■□□ 2.07
HMG20B-206ENST00000453933 CALD1Q05682 793 aaKnown RBP27.99■■■□□ 2.07
HMG20B-206ENST00000453933 IFNL1Q8IU54 200 aa27.99■■■□□ 2.07
HMG20B-206ENST00000453933 DEFB129Q9H1M3 183 aa27.99■■■□□ 2.07
HMG20B-206ENST00000453933 TRIM17Q9Y577 477 aa27.99■■■□□ 2.07
HMG20B-206ENST00000453933 MANSC4A6NHS7 340 aaPredicted RBP27.98■■■□□ 2.07
HMG20B-206ENST00000453933 IGHMBP2P38935 993 aaKnown RBP27.98■■■□□ 2.07
HMG20B-206ENST00000453933 INHBEP58166 350 aa27.98■■■□□ 2.07
HMG20B-206ENST00000453933 POTEFA5A3E0 1075 aa27.97■■■□□ 2.07
HMG20B-206ENST00000453933 NEURL1BA8MQ27 555 aa27.97■■■□□ 2.07
HMG20B-206ENST00000453933 H7C1W4 665 aa27.97■■■□□ 2.07
HMG20B-206ENST00000453933 NEXNQ0ZGT2 675 aa27.97■■■□□ 2.07
HMG20B-206ENST00000453933 OTOP1Q7RTM1 612 aa27.97■■■□□ 2.07
HMG20B-206ENST00000453933 UBE3BQ7Z3V4 1068 aa27.97■■■□□ 2.07
HMG20B-206ENST00000453933 GCC1Q96CN9 775 aa27.97■■■□□ 2.07
HMG20B-206ENST00000453933 CLMNQ96JQ2 1002 aa27.97■■■□□ 2.07
HMG20B-206ENST00000453933 MAP3K11Q16584 847 aa27.96■■■□□ 2.07
HMG20B-206ENST00000453933 CHMP4AQ9BY43 222 aa27.96■■■□□ 2.07
HMG20B-206ENST00000453933 ANKRD2Q9GZV1 360 aa27.96■■■□□ 2.07
HMG20B-206ENST00000453933 IGF2BP3O00425 579 aaKnown RBP eCLIP27.95■■■□□ 2.06
HMG20B-206ENST00000453933 DLGAP5Q15398 846 aa27.95■■■□□ 2.06
HMG20B-206ENST00000453933 PRKRIP1Q9H875 184 aaPredicted RBP27.95■■■□□ 2.06
HMG20B-206ENST00000453933 CD209Q9NNX6 404 aa27.95■■■□□ 2.06
HMG20B-206ENST00000453933 PCDHAC2Q9Y5I4 1007 aa27.95■■■□□ 2.06
HMG20B-206ENST00000453933 ITGA6P23229 1130 aa27.94■■■□□ 2.06
HMG20B-206ENST00000453933 CERS5Q8N5B7 392 aa27.94■■■□□ 2.06
HMG20B-206ENST00000453933 WNK4Q96J92 1243 aa27.94■■■□□ 2.06
HMG20B-206ENST00000453933 ZBTB48P10074 688 aaPredicted RBP27.93■■■□□ 2.06
HMG20B-206ENST00000453933 HABP4Q5JVS0 413 aaKnown RBP27.93■■■□□ 2.06
HMG20B-206ENST00000453933 INTS3Q68E01 1043 aaKnown RBP27.93■■■□□ 2.06
HMG20B-206ENST00000453933 MPHOSPH8Q99549 860 aa27.93■■■□□ 2.06
HMG20B-206ENST00000453933 SNAP23O00161 211 aa27.92■■■□□ 2.06
HMG20B-206ENST00000453933 G2E3Q7L622 706 aa27.92■■■□□ 2.06
HMG20B-206ENST00000453933 SPEF2Q9C093 1822 aa27.92■■■□□ 2.06
HMG20B-206ENST00000453933 SSC5DA1L4H1 1573 aa27.91■■■□□ 2.06
HMG20B-206ENST00000453933 PPP1R12BO60237 982 aaPredicted RBP27.91■■■□□ 2.06
HMG20B-206ENST00000453933 KCNJ4P48050 445 aa27.91■■■□□ 2.06
HMG20B-206ENST00000453933 CHRNDQ07001 517 aa27.91■■■□□ 2.06
HMG20B-206ENST00000453933 MTMR14Q8NCE2 650 aa27.91■■■□□ 2.06
HMG20B-206ENST00000453933 PLA2G12BQ9BX93 195 aa27.91■■■□□ 2.06
HMG20B-206ENST00000453933 COL1A1P02452 1464 aaPredicted RBP27.9■■■□□ 2.06
HMG20B-206ENST00000453933 CSF1RP07333 972 aa27.9■■■□□ 2.06
HMG20B-206ENST00000453933 PTPN22Q9Y2R2 807 aa27.9■■■□□ 2.06
HMG20B-206ENST00000453933 HTTP42858 3142 aa27.9■■■□□ 2.06
HMG20B-206ENST00000453933 CLRN2A0PK11 232 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms