RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 CEP126Q9P2H0 1117 aa10.22□□□□□ -0.77
LMO3-210ENST00000453727 CGNQ9P2M7 1197 aaKnown RBP10.22□□□□□ -0.77
LMO3-210ENST00000453727 RIPOR2Q9Y4F9 1068 aa10.22□□□□□ -0.77
LMO3-210ENST00000453727 LRP5O75197 1615 aa10.22□□□□□ -0.77
LMO3-210ENST00000453727 RIC1Q4ADV7 1423 aa10.22□□□□□ -0.77
LMO3-210ENST00000453727 SERPINB2P05120 415 aa10.22□□□□□ -0.77
LMO3-210ENST00000453727 CHMLP26374 656 aa10.22□□□□□ -0.77
LMO3-210ENST00000453727 C3orf67Q6ZVT6 689 aa10.22□□□□□ -0.77
LMO3-210ENST00000453727 CNTROBQ8N137 903 aa10.22□□□□□ -0.77
LMO3-210ENST00000453727 ZFP91Q96JP5 570 aaPredicted RBP10.22□□□□□ -0.77
LMO3-210ENST00000453727 NEUROD6Q96NK8 337 aa10.22□□□□□ -0.77
LMO3-210ENST00000453727 NLRP3Q96P20 1036 aa10.22□□□□□ -0.77
LMO3-210ENST00000453727 SEC31BQ9NQW1 1179 aa10.22□□□□□ -0.77
LMO3-210ENST00000453727 SPEF2Q9C093 1822 aa10.22□□□□□ -0.77
LMO3-210ENST00000453727 A0A1B0GUL7 405 aa10.21□□□□□ -0.77
LMO3-210ENST00000453727 DDR1Q08345 913 aa10.21□□□□□ -0.77
LMO3-210ENST00000453727 PRR5LQ6MZQ0 368 aa10.21□□□□□ -0.77
LMO3-210ENST00000453727 BOLA2Q9H3K6 86 aa10.21□□□□□ -0.77
LMO3-210ENST00000453727 CNNM1Q9NRU3 951 aa10.21□□□□□ -0.77
LMO3-210ENST00000453727 COL4A1P02462 1669 aa10.21□□□□□ -0.78
LMO3-210ENST00000453727 POLRMTO00411 1230 aaKnown RBP10.21□□□□□ -0.78
LMO3-210ENST00000453727 MCM5P33992 734 aa10.21□□□□□ -0.78
LMO3-210ENST00000453727 SF3B3Q15393 1217 aaKnown RBP10.21□□□□□ -0.78
LMO3-210ENST00000453727 TEX2Q8IWB9 1127 aa10.21□□□□□ -0.78
LMO3-210ENST00000453727 RTL9Q8NET4 1388 aa10.2□□□□□ -0.78
LMO3-210ENST00000453727 TAF1P21675 1872 aa10.2□□□□□ -0.78
LMO3-210ENST00000453727 ATP5JP18859 108 aa10.2□□□□□ -0.78
LMO3-210ENST00000453727 METTL24Q5JXM2 366 aa10.2□□□□□ -0.78
LMO3-210ENST00000453727 MSL1Q68DK7 614 aa10.2□□□□□ -0.78
LMO3-210ENST00000453727 RBM25P49756 843 aaKnown RBP10.19□□□□□ -0.78
LMO3-210ENST00000453727 HSCBQ8IWL3 235 aa10.19□□□□□ -0.78
LMO3-210ENST00000453727 VGLL2Q8N8G2 317 aa10.19□□□□□ -0.78
LMO3-210ENST00000453727 MPHOSPH8Q99549 860 aa10.19□□□□□ -0.78
LMO3-210ENST00000453727 ESYT1Q9BSJ8 1104 aa10.19□□□□□ -0.78
LMO3-210ENST00000453727 MMP10P09238 476 aa10.19□□□□□ -0.78
LMO3-210ENST00000453727 ST5P78524 1137 aa10.19□□□□□ -0.78
LMO3-210ENST00000453727 EVI5LQ96CN4 794 aa10.19□□□□□ -0.78
LMO3-210ENST00000453727 IL25Q9H293 177 aa10.19□□□□□ -0.78
LMO3-210ENST00000453727 AKAP2Q9Y2D5 859 aa10.19□□□□□ -0.78
LMO3-210ENST00000453727 NDUFB9Q9Y6M9 179 aa10.19□□□□□ -0.78
LMO3-210ENST00000453727 BRD2P25440 801 aaKnown RBP10.18□□□□□ -0.78
LMO3-210ENST00000453727 ADORA1P30542 326 aa10.18□□□□□ -0.78
LMO3-210ENST00000453727 IGHMBP2P38935 993 aaKnown RBP10.18□□□□□ -0.78
LMO3-210ENST00000453727 IRX3P78415 501 aaPredicted RBP10.18□□□□□ -0.78
LMO3-210ENST00000453727 ZNF771Q7L3S4 317 aaPredicted RBP10.18□□□□□ -0.78
LMO3-210ENST00000453727 EDC3Q96F86 508 aaKnown RBP10.18□□□□□ -0.78
LMO3-210ENST00000453727 CDC5LQ99459 802 aaKnown RBP10.18□□□□□ -0.78
LMO3-210ENST00000453727 USP26Q9BXU7 913 aa10.18□□□□□ -0.78
LMO3-210ENST00000453727 PDGFDQ9GZP0 370 aaPredicted RBP10.18□□□□□ -0.78
LMO3-210ENST00000453727 ZKSCAN5Q9Y2L8 839 aa10.18□□□□□ -0.78
LMO3-210ENST00000453727 TNRC6CQ9HCJ0 1690 aaKnown RBP10.18□□□□□ -0.78
LMO3-210ENST00000453727 GOLGA6L22H0YM25 854 aa10.18□□□□□ -0.78
LMO3-210ENST00000453727 PDE8BO95263 885 aa10.18□□□□□ -0.78
LMO3-210ENST00000453727 ATP2B3Q16720 1220 aa10.18□□□□□ -0.78
LMO3-210ENST00000453727 XAGE2Q96GT9 111 aa10.18□□□□□ -0.78
LMO3-210ENST00000453727 MROH5Q6ZUA9 1318 aa10.17□□□□□ -0.78
LMO3-210ENST00000453727 REC8O95072 547 aa10.17□□□□□ -0.78
LMO3-210ENST00000453727 ANKRD18AQ8IVF6 992 aa10.17□□□□□ -0.78
LMO3-210ENST00000453727 HELBQ8NG08 1087 aaPredicted RBP10.17□□□□□ -0.78
LMO3-210ENST00000453727 UPF1Q92900 1129 aaKnown RBP eCLIP10.17□□□□□ -0.78
LMO3-210ENST00000453727 DNAJC2Q99543 621 aaKnown RBP10.17□□□□□ -0.78
LMO3-210ENST00000453727 PARP3Q9Y6F1 533 aa10.17□□□□□ -0.78
LMO3-210ENST00000453727 QSER1Q2KHR3 1735 aa10.17□□□□□ -0.78
LMO3-210ENST00000453727 DDX46Q7L014 1031 aaKnown RBP10.17□□□□□ -0.78
LMO3-210ENST00000453727 MYRIPQ8NFW9 859 aa10.17□□□□□ -0.78
LMO3-210ENST00000453727 CELF1Q92879 486 aaKnown RBP10.17□□□□□ -0.78
LMO3-210ENST00000453727 TNPO1Q92973 898 aaKnown RBP10.17□□□□□ -0.78
LMO3-210ENST00000453727 HAUS7Q99871 368 aa10.17□□□□□ -0.78
LMO3-210ENST00000453727 ZBTB22O15209 634 aa10.16□□□□□ -0.78
LMO3-210ENST00000453727 CWC27Q6UX04 472 aaKnown RBP10.16□□□□□ -0.78
LMO3-210ENST00000453727 KIF2CQ99661 725 aa10.16□□□□□ -0.78
LMO3-210ENST00000453727 FSD1Q9BTV5 496 aa10.16□□□□□ -0.78
LMO3-210ENST00000453727 GOLGB1Q14789 3259 aaKnown RBP10.16□□□□□ -0.78
LMO3-210ENST00000453727 A0A1B0GUL6 1792 aa10.16□□□□□ -0.78
LMO3-210ENST00000453727 ARAP2Q8WZ64 1704 aa10.16□□□□□ -0.78
LMO3-210ENST00000453727 SGSM2O43147 1006 aa10.16□□□□□ -0.78
LMO3-210ENST00000453727 TAF5LO75529 589 aa10.16□□□□□ -0.78
LMO3-210ENST00000453727 IFIT1P09914 478 aaKnown RBP10.16□□□□□ -0.78
LMO3-210ENST00000453727 HMGN5P82970 282 aaKnown RBP10.16□□□□□ -0.78
LMO3-210ENST00000453727 GORABQ5T7V8 394 aa10.16□□□□□ -0.78
LMO3-210ENST00000453727 DIAPH3Q9NSV4 1193 aa10.16□□□□□ -0.78
LMO3-210ENST00000453727 SNAP23O00161 211 aa10.15□□□□□ -0.78
LMO3-210ENST00000453727 FGFR2P21802 821 aa10.15□□□□□ -0.78
LMO3-210ENST00000453727 RPS8P62241 208 aaKnown RBP10.15□□□□□ -0.78
LMO3-210ENST00000453727 PUM3Q15397 648 aaKnown RBP10.15□□□□□ -0.78
LMO3-210ENST00000453727 CCDC158Q5M9N0 1113 aa10.15□□□□□ -0.78
LMO3-210ENST00000453727 TTC39AQ5SRH9 613 aa10.15□□□□□ -0.78
LMO3-210ENST00000453727 RPGRQ92834 1020 aaKnown RBP10.15□□□□□ -0.78
LMO3-210ENST00000453727 ANO2Q9NQ90 1003 aa10.15□□□□□ -0.78
LMO3-210ENST00000453727 BSDC1Q9NW68 430 aaPredicted RBP10.15□□□□□ -0.78
LMO3-210ENST00000453727 CHRNDQ07001 517 aa10.15□□□□□ -0.79
LMO3-210ENST00000453727 CRY2Q49AN0 593 aa10.15□□□□□ -0.79
LMO3-210ENST00000453727 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.15□□□□□ -0.79
LMO3-210ENST00000453727 BRIP1Q9BX63 1249 aa10.15□□□□□ -0.79
LMO3-210ENST00000453727 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.15□□□□□ -0.79
LMO3-210ENST00000453727 CCDC39Q9UFE4 941 aa10.15□□□□□ -0.79
LMO3-210ENST00000453727 CIZ1Q9ULV3 898 aaPredicted RBP10.15□□□□□ -0.79
LMO3-210ENST00000453727 NRXN2Q9P2S2 1712 aa10.14□□□□□ -0.79
LMO3-210ENST00000453727 GOLIM4O00461 696 aa10.14□□□□□ -0.79
LMO3-210ENST00000453727 NMIQ13287 307 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms