RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 PRPF40BQ6NWY9 871 aaKnown RBP15.25■□□□□ 0.03
HLA-DPA1-244ENST00000453337 CASC1Q6TDU7 716 aa15.25■□□□□ 0.03
HLA-DPA1-244ENST00000453337 TTLL6Q8N841 843 aa15.25■□□□□ 0.03
HLA-DPA1-244ENST00000453337 EVI5LQ96CN4 794 aa15.25■□□□□ 0.03
HLA-DPA1-244ENST00000453337 HAUS7Q99871 368 aa15.25■□□□□ 0.03
HLA-DPA1-244ENST00000453337 GGA1Q9UJY5 639 aa15.25■□□□□ 0.03
HLA-DPA1-244ENST00000453337 ARAP2Q8WZ64 1704 aa15.25■□□□□ 0.03
HLA-DPA1-244ENST00000453337 SLX4Q8IY92 1834 aa15.24■□□□□ 0.03
HLA-DPA1-244ENST00000453337 DLEC1Q9Y238 1755 aa15.24■□□□□ 0.03
HLA-DPA1-244ENST00000453337 A0A0G2JLW4 131 aa15.24■□□□□ 0.03
HLA-DPA1-244ENST00000453337 SNAP23O00161 211 aa15.24■□□□□ 0.03
HLA-DPA1-244ENST00000453337 DPEP1P16444 411 aa15.24■□□□□ 0.03
HLA-DPA1-244ENST00000453337 C15orf52Q6ZUT6 534 aaKnown RBP15.24■□□□□ 0.03
HLA-DPA1-244ENST00000453337 TICAM2Q86XR7 235 aa15.24■□□□□ 0.03
HLA-DPA1-244ENST00000453337 VPS37DQ86XT2 251 aa15.24■□□□□ 0.03
HLA-DPA1-244ENST00000453337 MPNDQ8N594 471 aa15.24■□□□□ 0.03
HLA-DPA1-244ENST00000453337 BACH2Q9BYV9 841 aa15.24■□□□□ 0.03
HLA-DPA1-244ENST00000453337 CDC45O75419 566 aa15.23■□□□□ 0.03
HLA-DPA1-244ENST00000453337 KCNA3P22001 575 aa15.23■□□□□ 0.03
HLA-DPA1-244ENST00000453337 ARID4AP29374 1257 aaPredicted RBP15.23■□□□□ 0.03
HLA-DPA1-244ENST00000453337 PHKA1P46020 1223 aa15.23■□□□□ 0.03
HLA-DPA1-244ENST00000453337 FBXO33Q7Z6M2 555 aa15.23■□□□□ 0.03
HLA-DPA1-244ENST00000453337 PIM2Q9P1W9 311 aa15.23■□□□□ 0.03
HLA-DPA1-244ENST00000453337 AKAP11Q9UKA4 1901 aa15.23■□□□□ 0.03
HLA-DPA1-244ENST00000453337 LRRC37AA6NMS7 1700 aa15.23■□□□□ 0.03
HLA-DPA1-244ENST00000453337 C6orf229H3BNL8 230 aa15.22■□□□□ 0.03
HLA-DPA1-244ENST00000453337 ZBTB22O15209 634 aa15.22■□□□□ 0.03
HLA-DPA1-244ENST00000453337 UFL1O94874 794 aa15.22■□□□□ 0.03
HLA-DPA1-244ENST00000453337 MAP4K4O95819 1239 aaPredicted RBP15.22■□□□□ 0.03
HLA-DPA1-244ENST00000453337 HIBADHP31937 336 aaKnown RBP15.22■□□□□ 0.03
HLA-DPA1-244ENST00000453337 BCAMP50895 628 aa15.22■□□□□ 0.03
HLA-DPA1-244ENST00000453337 C8orf34Q49A92 452 aa15.22■□□□□ 0.03
HLA-DPA1-244ENST00000453337 FAM84BQ96KN1 310 aaPredicted RBP15.22■□□□□ 0.03
HLA-DPA1-244ENST00000453337 PPP1R1BQ9UD71 204 aaPredicted RBP15.22■□□□□ 0.03
HLA-DPA1-244ENST00000453337 WTIPA6NIX2 430 aaPredicted RBP15.21■□□□□ 0.03
HLA-DPA1-244ENST00000453337 HIP1O00291 1037 aa15.21■□□□□ 0.03
HLA-DPA1-244ENST00000453337 SEMA3EO15041 775 aa15.21■□□□□ 0.03
HLA-DPA1-244ENST00000453337 GYG1P46976 350 aa15.21■□□□□ 0.03
HLA-DPA1-244ENST00000453337 FKBP4Q02790 459 aaKnown RBP eCLIP15.21■□□□□ 0.03
HLA-DPA1-244ENST00000453337 TTF1Q15361 905 aaPredicted RBP15.21■□□□□ 0.03
HLA-DPA1-244ENST00000453337 LRRFIP1Q32MZ4 808 aaKnown RBP15.21■□□□□ 0.03
HLA-DPA1-244ENST00000453337 DPP8Q6V1X1 898 aaPredicted RBP15.21■□□□□ 0.03
HLA-DPA1-244ENST00000453337 TBC1D16Q8TBP0 767 aa15.21■□□□□ 0.03
HLA-DPA1-244ENST00000453337 C7orf43Q8WVR3 580 aa15.21■□□□□ 0.03
HLA-DPA1-244ENST00000453337 DNAJC2Q99543 621 aaKnown RBP15.21■□□□□ 0.03
HLA-DPA1-244ENST00000453337 PAG1Q9NWQ8 432 aa15.21■□□□□ 0.03
HLA-DPA1-244ENST00000453337 SOGA3Q5TF21 947 aa15.2■□□□□ 0.02
HLA-DPA1-244ENST00000453337 TBC1D9Q6ZT07 1266 aa15.2■□□□□ 0.02
HLA-DPA1-244ENST00000453337 ZNF804AQ7Z570 1209 aa15.2■□□□□ 0.02
HLA-DPA1-244ENST00000453337 EYA3Q99504 573 aa15.2■□□□□ 0.02
HLA-DPA1-244ENST00000453337 ZC3H12CQ9C0D7 883 aaKnown RBP15.2■□□□□ 0.02
HLA-DPA1-244ENST00000453337 POLLQ9UGP5 575 aa15.2■□□□□ 0.02
HLA-DPA1-244ENST00000453337 DENND2AQ9ULE3 1009 aa15.2■□□□□ 0.02
HLA-DPA1-244ENST00000453337 GOLIM4O00461 696 aa15.19■□□□□ 0.02
HLA-DPA1-244ENST00000453337 FRAT2O75474 233 aaPredicted RBP15.19■□□□□ 0.02
HLA-DPA1-244ENST00000453337 MCAMP43121 646 aa15.19■□□□□ 0.02
HLA-DPA1-244ENST00000453337 RTKN2Q8IZC4 609 aa15.19■□□□□ 0.02
HLA-DPA1-244ENST00000453337 KLHL34Q8N239 644 aa15.19■□□□□ 0.02
HLA-DPA1-244ENST00000453337 KBTBD3Q8NAB2 608 aa15.19■□□□□ 0.02
HLA-DPA1-244ENST00000453337 SPATA5Q8NB90 893 aa15.19■□□□□ 0.02
HLA-DPA1-244ENST00000453337 SUPT20HQ8NEM7 779 aa15.19■□□□□ 0.02
HLA-DPA1-244ENST00000453337 RUFY2Q8WXA3 655 aa15.19■□□□□ 0.02
HLA-DPA1-244ENST00000453337 FSD1Q9BTV5 496 aa15.19■□□□□ 0.02
HLA-DPA1-244ENST00000453337 SNRKQ9NRH2 765 aa15.19■□□□□ 0.02
HLA-DPA1-244ENST00000453337 MYH13Q9UKX3 1938 aa15.19■□□□□ 0.02
HLA-DPA1-244ENST00000453337 IRS2Q9Y4H2 1338 aa15.18■□□□□ 0.02
HLA-DPA1-244ENST00000453337 CHMLP26374 656 aa15.18■□□□□ 0.02
HLA-DPA1-244ENST00000453337 ZAP70P43403 619 aa15.18■□□□□ 0.02
HLA-DPA1-244ENST00000453337 SCARF1Q14162 830 aa15.18■□□□□ 0.02
HLA-DPA1-244ENST00000453337 DALRD3Q5D0E6 543 aaKnown RBP15.18■□□□□ 0.02
HLA-DPA1-244ENST00000453337 HMG20BQ9P0W2 317 aa15.18■□□□□ 0.02
HLA-DPA1-244ENST00000453337 LTBP1Q14766 1721 aa15.17■□□□□ 0.02
HLA-DPA1-244ENST00000453337 MED23Q9ULK4 1368 aa15.17■□□□□ 0.02
HLA-DPA1-244ENST00000453337 C21orf2O43822 256 aa15.17■□□□□ 0.02
HLA-DPA1-244ENST00000453337 RASGRF1Q13972 1273 aa15.17■□□□□ 0.02
HLA-DPA1-244ENST00000453337 WASHC4Q2M389 1173 aa15.17■□□□□ 0.02
HLA-DPA1-244ENST00000453337 CCDC93Q567U6 631 aa15.17■□□□□ 0.02
HLA-DPA1-244ENST00000453337 ZSCAN25Q6NSZ9 544 aa15.17■□□□□ 0.02
HLA-DPA1-244ENST00000453337 TXNRD3Q86VQ6 643 aa15.17■□□□□ 0.02
HLA-DPA1-244ENST00000453337 EDC3Q96F86 508 aaKnown RBP15.17■□□□□ 0.02
HLA-DPA1-244ENST00000453337 RTFDC1Q9BY42 306 aaPredicted RBP15.17■□□□□ 0.02
HLA-DPA1-244ENST00000453337 DIAPH3Q9NSV4 1193 aa15.17■□□□□ 0.02
HLA-DPA1-244ENST00000453337 ZNF219Q9P2Y4 722 aaPredicted RBP15.17■□□□□ 0.02
HLA-DPA1-244ENST00000453337 KIAA1551Q9HCM1 1747 aa15.17■□□□□ 0.02
HLA-DPA1-244ENST00000453337 PDS5AQ29RF7 1337 aaKnown RBP15.17■□□□□ 0.02
HLA-DPA1-244ENST00000453337 MYH7P12883 1935 aa15.16■□□□□ 0.02
HLA-DPA1-244ENST00000453337 G3V3G9 751 aa15.16■□□□□ 0.02
HLA-DPA1-244ENST00000453337 CYP2E1P05181 493 aaPredicted RBP15.16■□□□□ 0.02
HLA-DPA1-244ENST00000453337 ZFYP08048 801 aaPredicted RBP15.16■□□□□ 0.02
HLA-DPA1-244ENST00000453337 KLRK1P26718 216 aa15.16■□□□□ 0.02
HLA-DPA1-244ENST00000453337 DCAF8Q5TAQ9 597 aa15.16■□□□□ 0.02
HLA-DPA1-244ENST00000453337 OLFM4Q6UX06 510 aa15.16■□□□□ 0.02
HLA-DPA1-244ENST00000453337 TDRD7Q8NHU6 1098 aaKnown RBP15.16■□□□□ 0.02
HLA-DPA1-244ENST00000453337 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.16■□□□□ 0.02
HLA-DPA1-244ENST00000453337 COA1Q9GZY4 146 aa15.16■□□□□ 0.02
HLA-DPA1-244ENST00000453337 UPF2Q9HAU5 1272 aaKnown RBP15.16■□□□□ 0.02
HLA-DPA1-244ENST00000453337 NDUFB9Q9Y6M9 179 aa15.16■□□□□ 0.02
HLA-DPA1-244ENST00000453337 BRCA1P38398 1863 aaKnown RBP15.16■□□□□ 0.02
HLA-DPA1-244ENST00000453337 CHD4Q14839 1912 aa15.15■□□□□ 0.02
HLA-DPA1-244ENST00000453337 RFX7Q2KHR2 1363 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms