RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 ZNF609O15014 1411 aa14.68□□□□□ -0.06
LINC00339-205ENST00000452322 ARAP2Q8WZ64 1704 aa14.67□□□□□ -0.06
LINC00339-205ENST00000452322 CCDC88AQ3V6T2 1871 aa14.67□□□□□ -0.06
LINC00339-205ENST00000452322 DICER1Q9UPY3 1922 aaKnown RBP14.67□□□□□ -0.06
LINC00339-205ENST00000452322 IFIT1P09914 478 aaKnown RBP14.67□□□□□ -0.06
LINC00339-205ENST00000452322 SLC5A1P13866 664 aa14.67□□□□□ -0.06
LINC00339-205ENST00000452322 LARGE2Q8N3Y3 721 aa14.67□□□□□ -0.06
LINC00339-205ENST00000452322 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.67□□□□□ -0.06
LINC00339-205ENST00000452322 A0A1B0GUL7 405 aa14.66□□□□□ -0.06
LINC00339-205ENST00000452322 RIMBP2O15034 1052 aa14.66□□□□□ -0.06
LINC00339-205ENST00000452322 IGHDP01880 384 aa14.66□□□□□ -0.06
LINC00339-205ENST00000452322 KLRK1P26718 216 aa14.66□□□□□ -0.06
LINC00339-205ENST00000452322 COL4A5P29400 1685 aa14.66□□□□□ -0.06
LINC00339-205ENST00000452322 TNNI3KQ59H18 835 aa14.66□□□□□ -0.06
LINC00339-205ENST00000452322 TXNRD3Q86VQ6 643 aa14.66□□□□□ -0.06
LINC00339-205ENST00000452322 LRRCC1Q9C099 1032 aa14.66□□□□□ -0.06
LINC00339-205ENST00000452322 RNF181Q9P0P0 153 aa14.66□□□□□ -0.06
LINC00339-205ENST00000452322 FPGT-TNNI3KV9GXZ4 949 aa14.66□□□□□ -0.06
LINC00339-205ENST00000452322 APBB1O00213 710 aa14.65□□□□□ -0.06
LINC00339-205ENST00000452322 C9orf131Q5VYM1 1079 aa14.65□□□□□ -0.06
LINC00339-205ENST00000452322 SMC5Q8IY18 1101 aa14.65□□□□□ -0.06
LINC00339-205ENST00000452322 JDP2Q8WYK2 163 aa14.65□□□□□ -0.06
LINC00339-205ENST00000452322 TIAM2Q8IVF5 1701 aa14.65□□□□□ -0.06
LINC00339-205ENST00000452322 ZC3H4Q9UPT8 1303 aaKnown RBP14.64□□□□□ -0.07
LINC00339-205ENST00000452322 TIMM10P62072 90 aa14.64□□□□□ -0.07
LINC00339-205ENST00000452322 CAVIN4Q5BKX8 364 aa14.64□□□□□ -0.07
LINC00339-205ENST00000452322 ZNF804AQ7Z570 1209 aa14.64□□□□□ -0.07
LINC00339-205ENST00000452322 NIM1KQ8IY84 436 aa14.64□□□□□ -0.07
LINC00339-205ENST00000452322 CLASRPQ8N2M8 674 aaKnown RBP14.64□□□□□ -0.07
LINC00339-205ENST00000452322 COA1Q9GZY4 146 aa14.64□□□□□ -0.07
LINC00339-205ENST00000452322 IL1RAPL2Q9NP60 686 aa14.64□□□□□ -0.07
LINC00339-205ENST00000452322 CHD4Q14839 1912 aa14.64□□□□□ -0.07
LINC00339-205ENST00000452322 G3V3G9 751 aa14.63□□□□□ -0.07
LINC00339-205ENST00000452322 HIBADHP31937 336 aaKnown RBP14.63□□□□□ -0.07
LINC00339-205ENST00000452322 DCAF8Q5TAQ9 597 aa14.63□□□□□ -0.07
LINC00339-205ENST00000452322 EAF2Q96CJ1 260 aaPredicted RBP14.63□□□□□ -0.07
LINC00339-205ENST00000452322 FAM84BQ96KN1 310 aaPredicted RBP14.63□□□□□ -0.07
LINC00339-205ENST00000452322 NEUROD6Q96NK8 337 aa14.63□□□□□ -0.07
LINC00339-205ENST00000452322 DBNDD1Q9H9R9 158 aa14.63□□□□□ -0.07
LINC00339-205ENST00000452322 FZD9O00144 591 aa14.62□□□□□ -0.07
LINC00339-205ENST00000452322 ECE2O60344 883 aa14.62□□□□□ -0.07
LINC00339-205ENST00000452322 GYG1P46976 350 aa14.62□□□□□ -0.07
LINC00339-205ENST00000452322 DOK7Q18PE1 504 aa14.62□□□□□ -0.07
LINC00339-205ENST00000452322 PODNQ7Z5L7 613 aa14.62□□□□□ -0.07
LINC00339-205ENST00000452322 FBXO33Q7Z6M2 555 aa14.62□□□□□ -0.07
LINC00339-205ENST00000452322 AACSQ86V21 672 aa14.62□□□□□ -0.07
LINC00339-205ENST00000452322 XAGE2Q96GT9 111 aa14.62□□□□□ -0.07
LINC00339-205ENST00000452322 CD209Q9NNX6 404 aa14.62□□□□□ -0.07
LINC00339-205ENST00000452322 ZNRF3Q9ULT6 936 aa14.62□□□□□ -0.07
LINC00339-205ENST00000452322 IL1R1P14778 569 aa14.61□□□□□ -0.07
LINC00339-205ENST00000452322 ADORA1P30542 326 aa14.61□□□□□ -0.07
LINC00339-205ENST00000452322 VPS37DQ86XT2 251 aa14.61□□□□□ -0.07
LINC00339-205ENST00000452322 YDJCA8MPS7 323 aa14.6□□□□□ -0.07
LINC00339-205ENST00000452322 ZBTB22O15209 634 aa14.6□□□□□ -0.07
LINC00339-205ENST00000452322 SMARCA5O60264 1052 aaPredicted RBP14.6□□□□□ -0.07
LINC00339-205ENST00000452322 BCAMP50895 628 aa14.6□□□□□ -0.07
LINC00339-205ENST00000452322 ANKRD45Q5TZF3 282 aa14.6□□□□□ -0.07
LINC00339-205ENST00000452322 CCDC102BQ68D86 513 aa14.6□□□□□ -0.07
LINC00339-205ENST00000452322 CCDC136Q96JN2 1154 aa14.6□□□□□ -0.07
LINC00339-205ENST00000452322 DBNDD2Q9BQY9 259 aa14.6□□□□□ -0.07
LINC00339-205ENST00000452322 CCDC8Q9H0W5 538 aaPredicted RBP14.6□□□□□ -0.07
LINC00339-205ENST00000452322 ZBTB47Q9UFB7 747 aaPredicted RBP14.6□□□□□ -0.07
LINC00339-205ENST00000452322 DBNLQ9UJU6 430 aaKnown RBP14.6□□□□□ -0.07
LINC00339-205ENST00000452322 KDM2BQ8NHM5 1336 aa14.6□□□□□ -0.07
LINC00339-205ENST00000452322 PSME4Q14997 1843 aa14.6□□□□□ -0.07
LINC00339-205ENST00000452322 IFIT2P09913 472 aaKnown RBP14.6□□□□□ -0.07
LINC00339-205ENST00000452322 EIF6P56537 245 aaKnown RBP14.6□□□□□ -0.07
LINC00339-205ENST00000452322 GORABQ5T7V8 394 aa14.6□□□□□ -0.07
LINC00339-205ENST00000452322 TDRD7Q8NHU6 1098 aaKnown RBP14.6□□□□□ -0.07
LINC00339-205ENST00000452322 GNL3LQ9NVN8 582 aaKnown RBP14.6□□□□□ -0.07
LINC00339-205ENST00000452322 PPP4R2Q9NY27 417 aa14.6□□□□□ -0.07
LINC00339-205ENST00000452322 TLR7Q9NYK1 1049 aaKnown RBP14.6□□□□□ -0.07
LINC00339-205ENST00000452322 SCN9AQ15858 1988 aa14.59□□□□□ -0.07
LINC00339-205ENST00000452322 PHKA1P46020 1223 aa14.59□□□□□ -0.07
LINC00339-205ENST00000452322 CCDC158Q5M9N0 1113 aa14.59□□□□□ -0.07
LINC00339-205ENST00000452322 B4GALNT3Q6L9W6 998 aa14.59□□□□□ -0.07
LINC00339-205ENST00000452322 CENPQQ7L2Z9 268 aaPredicted RBP14.59□□□□□ -0.07
LINC00339-205ENST00000452322 ZNF541Q9H0D2 1346 aa14.58□□□□□ -0.08
LINC00339-205ENST00000452322 SEMA3EO15041 775 aa14.58□□□□□ -0.08
LINC00339-205ENST00000452322 ARID4AP29374 1257 aaPredicted RBP14.58□□□□□ -0.08
LINC00339-205ENST00000452322 NUCB1Q02818 461 aa14.58□□□□□ -0.08
LINC00339-205ENST00000452322 CXCL9Q07325 125 aa14.58□□□□□ -0.08
LINC00339-205ENST00000452322 CIAPIN1Q6FI81 312 aa14.58□□□□□ -0.08
LINC00339-205ENST00000452322 CHD1LQ86WJ1 897 aa14.58□□□□□ -0.08
LINC00339-205ENST00000452322 ZNF512BQ96KM6 892 aaPredicted RBP14.58□□□□□ -0.08
LINC00339-205ENST00000452322 MYH13Q9UKX3 1938 aa14.57□□□□□ -0.08
LINC00339-205ENST00000452322 FAM205AQ6ZU69 1335 aa14.57□□□□□ -0.08
LINC00339-205ENST00000452322 ZNF646O15015 1829 aaPredicted RBP14.57□□□□□ -0.08
LINC00339-205ENST00000452322 USP17L3A6NCW0 530 aa14.57□□□□□ -0.08
LINC00339-205ENST00000452322 USP17L4A6NCW7 530 aa14.57□□□□□ -0.08
LINC00339-205ENST00000452322 FRAT2O75474 233 aaPredicted RBP14.57□□□□□ -0.08
LINC00339-205ENST00000452322 RAD17O75943 681 aa14.57□□□□□ -0.08
LINC00339-205ENST00000452322 UQCRFS1P1P0C7P4 283 aa14.57□□□□□ -0.08
LINC00339-205ENST00000452322 TNIP1Q15025 636 aa14.57□□□□□ -0.08
LINC00339-205ENST00000452322 TTC39AQ5SRH9 613 aa14.57□□□□□ -0.08
LINC00339-205ENST00000452322 STRIP1Q5VSL9 837 aa14.57□□□□□ -0.08
LINC00339-205ENST00000452322 USP17L1Q7RTZ2 530 aa14.57□□□□□ -0.08
LINC00339-205ENST00000452322 BCL11AQ9H165 835 aa14.57□□□□□ -0.08
LINC00339-205ENST00000452322 KCNQ5Q9NR82 932 aa14.57□□□□□ -0.08
LINC00339-205ENST00000452322 DENND2AQ9ULE3 1009 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms