RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 SPEF2Q9C093 1822 aa20.23■□□□□ 0.83
SCAMP4-205ENST00000452128 USP17L3A6NCW0 530 aa20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 USP17L4A6NCW7 530 aa20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 EGFRP00533 1210 aa20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 RLBP1P12271 317 aa20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 ZNF280AP59817 542 aaPredicted RBP20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 DACT2Q5SW24 774 aa20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 ZKSCAN2Q63HK3 967 aa20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 RSBN1LQ6PCB5 846 aaPredicted RBP20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 USP17L1Q7RTZ2 530 aa20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 MICALL2Q8IY33 904 aa20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 AGBL3Q8NEM8 1001 aa20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 TRPM4Q8TD43 1214 aa20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 FRAT1Q92837 279 aaPredicted RBP20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 CD209Q9NNX6 404 aa20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 CNNM1Q9NRU3 951 aa20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 LRRFIP2Q9Y608 721 aaKnown RBP20.22■□□□□ 0.83
SCAMP4-205ENST00000452128 HTRA3P83110 453 aa20.21■□□□□ 0.83
SCAMP4-205ENST00000452128 MTX1Q13505 466 aa20.21■□□□□ 0.83
SCAMP4-205ENST00000452128 UBE4AQ14139 1066 aa20.21■□□□□ 0.83
SCAMP4-205ENST00000452128 TAF7LQ5H9L4 462 aa20.21■□□□□ 0.83
SCAMP4-205ENST00000452128 MAP1SQ66K74 1059 aaPredicted RBP20.21■□□□□ 0.83
SCAMP4-205ENST00000452128 ATG9AQ7Z3C6 839 aa20.21■□□□□ 0.83
SCAMP4-205ENST00000452128 CNTROBQ8N137 903 aa20.21■□□□□ 0.83
SCAMP4-205ENST00000452128 TMEM57Q8N5G2 664 aa20.21■□□□□ 0.83
SCAMP4-205ENST00000452128 CLUAP1Q96AJ1 413 aa20.21■□□□□ 0.83
SCAMP4-205ENST00000452128 IL1R1P14778 569 aa20.2■□□□□ 0.82
SCAMP4-205ENST00000452128 STRIP1Q5VSL9 837 aa20.2■□□□□ 0.82
SCAMP4-205ENST00000452128 ZC3H15Q8WU90 426 aaKnown RBP20.2■□□□□ 0.82
SCAMP4-205ENST00000452128 MROH5Q6ZUA9 1318 aa20.2■□□□□ 0.82
SCAMP4-205ENST00000452128 GNAI3P08754 354 aa20.19■□□□□ 0.82
SCAMP4-205ENST00000452128 FGFR2P21802 821 aa20.19■□□□□ 0.82
SCAMP4-205ENST00000452128 SAMD7Q7Z3H4 446 aa20.19■□□□□ 0.82
SCAMP4-205ENST00000452128 FAM84BQ96KN1 310 aaPredicted RBP20.19■□□□□ 0.82
SCAMP4-205ENST00000452128 G3V3G9 751 aa20.18■□□□□ 0.82
SCAMP4-205ENST00000452128 H7C1D1 291 aa20.18■□□□□ 0.82
SCAMP4-205ENST00000452128 EYA2O00167 538 aa20.18■□□□□ 0.82
SCAMP4-205ENST00000452128 DCAF8Q5TAQ9 597 aa20.18■□□□□ 0.82
SCAMP4-205ENST00000452128 MXD3Q9BW11 206 aa20.18■□□□□ 0.82
SCAMP4-205ENST00000452128 HDAC5Q9UQL6 1122 aa20.18■□□□□ 0.82
SCAMP4-205ENST00000452128 A0A1B0GUL6 1792 aa20.18■□□□□ 0.82
SCAMP4-205ENST00000452128 PLIN1O60240 522 aa20.17■□□□□ 0.82
SCAMP4-205ENST00000452128 PDE8BO95263 885 aa20.17■□□□□ 0.82
SCAMP4-205ENST00000452128 KCNJ4P48050 445 aa20.17■□□□□ 0.82
SCAMP4-205ENST00000452128 FBXO33Q7Z6M2 555 aa20.17■□□□□ 0.82
SCAMP4-205ENST00000452128 COPRSQ9NQ92 184 aa20.17■□□□□ 0.82
SCAMP4-205ENST00000452128 FBXO3Q9UK99 471 aa20.17■□□□□ 0.82
SCAMP4-205ENST00000452128 CLEC11AQ9Y240 323 aa20.17■□□□□ 0.82
SCAMP4-205ENST00000452128 ZNF646O15015 1829 aaPredicted RBP20.17■□□□□ 0.82
SCAMP4-205ENST00000452128 PSME4Q14997 1843 aa20.16■□□□□ 0.82
SCAMP4-205ENST00000452128 ZBTB7BO15156 539 aaPredicted RBP20.16■□□□□ 0.82
SCAMP4-205ENST00000452128 CIAO1O76071 339 aa20.16■□□□□ 0.82
SCAMP4-205ENST00000452128 FMR1Q06787 632 aaKnown RBP eCLIP20.16■□□□□ 0.82
SCAMP4-205ENST00000452128 TTLL5Q6EMB2 1281 aa20.16■□□□□ 0.82
SCAMP4-205ENST00000452128 DZIP1LQ8IYY4 767 aaKnown RBP20.16■□□□□ 0.82
SCAMP4-205ENST00000452128 TDRD7Q8NHU6 1098 aaKnown RBP20.16■□□□□ 0.82
SCAMP4-205ENST00000452128 CERS5Q8N5B7 392 aa20.15■□□□□ 0.82
SCAMP4-205ENST00000452128 FAM205AQ6ZU69 1335 aa20.14■□□□□ 0.81
SCAMP4-205ENST00000452128 SASH1O94885 1247 aa20.14■□□□□ 0.81
SCAMP4-205ENST00000452128 USP17L8P0C7I0 530 aa20.14■□□□□ 0.81
SCAMP4-205ENST00000452128 GTF2IP78347 998 aa20.14■□□□□ 0.81
SCAMP4-205ENST00000452128 TBC1D10BQ4KMP7 808 aaPredicted RBP20.14■□□□□ 0.81
SCAMP4-205ENST00000452128 METTL24Q5JXM2 366 aa20.14■□□□□ 0.81
SCAMP4-205ENST00000452128 CREBZFQ9NS37 354 aa20.14■□□□□ 0.81
SCAMP4-205ENST00000452128 PA2G4Q9UQ80 394 aaKnown RBP20.14■□□□□ 0.81
SCAMP4-205ENST00000452128 GNAI2P04899 355 aa20.13■□□□□ 0.81
SCAMP4-205ENST00000452128 GYG1P46976 350 aa20.13■□□□□ 0.81
SCAMP4-205ENST00000452128 FKBP1AP62942 108 aaKnown RBP20.13■□□□□ 0.81
SCAMP4-205ENST00000452128 CST9Q5W186 159 aa20.13■□□□□ 0.81
SCAMP4-205ENST00000452128 ZBED3Q96IU2 234 aaPredicted RBP20.13■□□□□ 0.81
SCAMP4-205ENST00000452128 ASTN2O75129 1339 aaPredicted RBP20.12■□□□□ 0.81
SCAMP4-205ENST00000452128 TRAF5O00463 557 aa20.12■□□□□ 0.81
SCAMP4-205ENST00000452128 HIBADHP31937 336 aaKnown RBP20.12■□□□□ 0.81
SCAMP4-205ENST00000452128 MMP14P50281 582 aa20.12■□□□□ 0.81
SCAMP4-205ENST00000452128 ZNF804AQ7Z570 1209 aa20.12■□□□□ 0.81
SCAMP4-205ENST00000452128 MYO3BQ8WXR4 1341 aa20.11■□□□□ 0.81
SCAMP4-205ENST00000452128 PNMA6EA0A0J9YXQ4 647 aa20.11■□□□□ 0.81
SCAMP4-205ENST00000452128 KIF4BQ2VIQ3 1234 aa20.11■□□□□ 0.81
SCAMP4-205ENST00000452128 KLRG1Q96E93 195 aa20.11■□□□□ 0.81
SCAMP4-205ENST00000452128 GLIS2Q9BZE0 524 aaPredicted RBP20.11■□□□□ 0.81
SCAMP4-205ENST00000452128 RCAN3Q9UKA8 241 aa20.11■□□□□ 0.81
SCAMP4-205ENST00000452128 TMEM88BA6NKF7 163 aa20.1■□□□□ 0.81
SCAMP4-205ENST00000452128 ZBTB22O15209 634 aa20.1■□□□□ 0.81
SCAMP4-205ENST00000452128 POLA2Q14181 598 aa20.1■□□□□ 0.81
SCAMP4-205ENST00000452128 PUM3Q15397 648 aaKnown RBP20.1■□□□□ 0.81
SCAMP4-205ENST00000452128 RBM26Q5T8P6 1007 aaKnown RBP20.1■□□□□ 0.81
SCAMP4-205ENST00000452128 JMYQ8N9B5 988 aa20.1■□□□□ 0.81
SCAMP4-205ENST00000452128 PANK1Q8TE04 598 aa20.1■□□□□ 0.81
SCAMP4-205ENST00000452128 MYOZ2Q9NPC6 264 aa20.1■□□□□ 0.81
SCAMP4-205ENST00000452128 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.1■□□□□ 0.81
SCAMP4-205ENST00000452128 PCNTO95613 3336 aa20.1■□□□□ 0.81
SCAMP4-205ENST00000452128 SRGAP3O43295 1099 aa20.09■□□□□ 0.81
SCAMP4-205ENST00000452128 IL15P40933 162 aaPredicted RBP20.09■□□□□ 0.81
SCAMP4-205ENST00000452128 BCAMP50895 628 aa20.09■□□□□ 0.81
SCAMP4-205ENST00000452128 SCARF1Q14162 830 aa20.09■□□□□ 0.81
SCAMP4-205ENST00000452128 DLK2Q6UY11 383 aa20.09■□□□□ 0.81
SCAMP4-205ENST00000452128 CDC37L1Q7L3B6 337 aa20.09■□□□□ 0.81
SCAMP4-205ENST00000452128 SIL1Q9H173 461 aa20.09■□□□□ 0.81
SCAMP4-205ENST00000452128 ATP8B2P98198 1209 aa20.08■□□□□ 0.81
SCAMP4-205ENST00000452128 SSH3Q8TE77 659 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms