RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 CASP7P55210 303 aa27.35■■□□□ 1.97
C9orf3-208ENST00000451893 SULF1Q8IWU6 871 aa27.35■■□□□ 1.97
C9orf3-208ENST00000451893 SRCIN1Q9C0H9 1055 aa27.35■■□□□ 1.97
C9orf3-208ENST00000451893 ZNF804BA4D1E1 1349 aa27.35■■□□□ 1.97
C9orf3-208ENST00000451893 E9PSI1 815 aa27.34■■□□□ 1.97
C9orf3-208ENST00000451893 GRM8O00222 908 aa27.34■■□□□ 1.97
C9orf3-208ENST00000451893 FOXN1O15353 648 aa27.34■■□□□ 1.97
C9orf3-208ENST00000451893 CSF1RP07333 972 aa27.34■■□□□ 1.97
C9orf3-208ENST00000451893 CCDC57Q2TAC2 916 aa27.34■■□□□ 1.97
C9orf3-208ENST00000451893 PCNTO95613 3336 aa27.34■■□□□ 1.97
C9orf3-208ENST00000451893 USP17L8P0C7I0 530 aa27.33■■□□□ 1.97
C9orf3-208ENST00000451893 COA1Q9GZY4 146 aa27.33■■□□□ 1.97
C9orf3-208ENST00000451893 GGA3Q9NZ52 723 aa27.33■■□□□ 1.97
C9orf3-208ENST00000451893 ALDH1L1O75891 902 aa27.32■■□□□ 1.96
C9orf3-208ENST00000451893 EGFRP00533 1210 aa27.32■■□□□ 1.96
C9orf3-208ENST00000451893 CHRNDQ07001 517 aa27.32■■□□□ 1.96
C9orf3-208ENST00000451893 OGFOD1Q8N543 542 aa27.32■■□□□ 1.96
C9orf3-208ENST00000451893 SAPCD2Q86UD0 394 aa27.31■■□□□ 1.96
C9orf3-208ENST00000451893 CAPN15O75808 1086 aa27.3■■□□□ 1.96
C9orf3-208ENST00000451893 LMBR1LQ6UX01 489 aa27.3■■□□□ 1.96
C9orf3-208ENST00000451893 C2orf69Q8N8R5 385 aa27.3■■□□□ 1.96
C9orf3-208ENST00000451893 WBP1LQ9NX94 342 aa27.3■■□□□ 1.96
C9orf3-208ENST00000451893 MYO3BQ8WXR4 1341 aa27.3■■□□□ 1.96
C9orf3-208ENST00000451893 ZNF521Q96K83 1311 aa27.3■■□□□ 1.96
C9orf3-208ENST00000451893 ADM5C9JUS6 153 aa27.29■■□□□ 1.96
C9orf3-208ENST00000451893 MYOZ2Q9NPC6 264 aa27.29■■□□□ 1.96
C9orf3-208ENST00000451893 CNNM1Q9NRU3 951 aa27.29■■□□□ 1.96
C9orf3-208ENST00000451893 WTIPA6NIX2 430 aaPredicted RBP27.28■■□□□ 1.96
C9orf3-208ENST00000451893 HUNKP57058 714 aa27.28■■□□□ 1.96
C9orf3-208ENST00000451893 FOXO4P98177 505 aa27.28■■□□□ 1.96
C9orf3-208ENST00000451893 SCARF1Q14162 830 aa27.28■■□□□ 1.96
C9orf3-208ENST00000451893 PLIN1O60240 522 aa27.27■■□□□ 1.96
C9orf3-208ENST00000451893 ZNF280AP59817 542 aaPredicted RBP27.27■■□□□ 1.96
C9orf3-208ENST00000451893 ANGEL2Q5VTE6 544 aaKnown RBP27.27■■□□□ 1.96
C9orf3-208ENST00000451893 GBA2Q9HCG7 927 aaPredicted RBP27.27■■□□□ 1.96
C9orf3-208ENST00000451893 ZNF609O15014 1411 aa27.26■■□□□ 1.95
C9orf3-208ENST00000451893 STRIP1Q5VSL9 837 aa27.26■■□□□ 1.95
C9orf3-208ENST00000451893 TTLL5Q6EMB2 1281 aa27.26■■□□□ 1.95
C9orf3-208ENST00000451893 LDHAL6AQ6ZMR3 332 aa27.26■■□□□ 1.95
C9orf3-208ENST00000451893 HELBQ8NG08 1087 aaPredicted RBP27.26■■□□□ 1.95
C9orf3-208ENST00000451893 HHIPL1Q96JK4 782 aa27.26■■□□□ 1.95
C9orf3-208ENST00000451893 HDAC9Q9UKV0 1011 aa27.26■■□□□ 1.95
C9orf3-208ENST00000451893 AOC2O75106 756 aa27.25■■□□□ 1.95
C9orf3-208ENST00000451893 TAF5LO75529 589 aa27.25■■□□□ 1.95
C9orf3-208ENST00000451893 MAP2K2P36507 400 aa27.25■■□□□ 1.95
C9orf3-208ENST00000451893 LBX1P52954 281 aa27.25■■□□□ 1.95
C9orf3-208ENST00000451893 PRDM10Q9NQV6 1147 aa27.25■■□□□ 1.95
C9orf3-208ENST00000451893 PTPRCP08575 1304 aa27.24■■□□□ 1.95
C9orf3-208ENST00000451893 DLK2Q6UY11 383 aa27.24■■□□□ 1.95
C9orf3-208ENST00000451893 ZNF804AQ7Z570 1209 aa27.24■■□□□ 1.95
C9orf3-208ENST00000451893 TXNRD3Q86VQ6 643 aa27.24■■□□□ 1.95
C9orf3-208ENST00000451893 KLRK1P26718 216 aa27.23■■□□□ 1.95
C9orf3-208ENST00000451893 GTF2IP78347 998 aa27.23■■□□□ 1.95
C9orf3-208ENST00000451893 DACT2Q5SW24 774 aa27.23■■□□□ 1.95
C9orf3-208ENST00000451893 MRPL50Q8N5N7 158 aaKnown RBP27.23■■□□□ 1.95
C9orf3-208ENST00000451893 ZNF594Q96JF6 807 aaPredicted RBP27.23■■□□□ 1.95
C9orf3-208ENST00000451893 MXD3Q9BW11 206 aa27.23■■□□□ 1.95
C9orf3-208ENST00000451893 ASTN2O75129 1339 aaPredicted RBP27.22■■□□□ 1.95
C9orf3-208ENST00000451893 SLFN5Q08AF3 891 aa27.22■■□□□ 1.95
C9orf3-208ENST00000451893 EPHA10Q5JZY3 1008 aa27.22■■□□□ 1.95
C9orf3-208ENST00000451893 GMLQ99445 158 aa27.22■■□□□ 1.95
C9orf3-208ENST00000451893 THSD7BQ9C0I4 1608 aa27.22■■□□□ 1.95
C9orf3-208ENST00000451893 CDCA5Q96FF9 252 aa27.21■■□□□ 1.95
C9orf3-208ENST00000451893 SMC4Q9NTJ3 1288 aa27.21■■□□□ 1.95
C9orf3-208ENST00000451893 A0A1B0GUL6 1792 aa27.21■■□□□ 1.95
C9orf3-208ENST00000451893 KIAA0825Q8IV33 1275 aa27.2■■□□□ 1.94
C9orf3-208ENST00000451893 SUCLG2Q96I99 432 aa27.2■■□□□ 1.94
C9orf3-208ENST00000451893 CD209Q9NNX6 404 aa27.2■■□□□ 1.94
C9orf3-208ENST00000451893 PITPNM2Q9BZ72 1349 aa27.19■■□□□ 1.94
C9orf3-208ENST00000451893 HSPA8P11142 646 aaKnown RBP27.19■■□□□ 1.94
C9orf3-208ENST00000451893 MMP14P50281 582 aa27.19■■□□□ 1.94
C9orf3-208ENST00000451893 NOGQ13253 232 aa27.19■■□□□ 1.94
C9orf3-208ENST00000451893 RGMBQ6NW40 437 aa27.19■■□□□ 1.94
C9orf3-208ENST00000451893 SSH1Q8WYL5 1049 aa27.19■■□□□ 1.94
C9orf3-208ENST00000451893 ZNF157P51786 506 aaPredicted RBP27.18■■□□□ 1.94
C9orf3-208ENST00000451893 SNAP23O00161 211 aa27.17■■□□□ 1.94
C9orf3-208ENST00000451893 NBPF7P0C2Y1 421 aaPredicted RBP27.17■■□□□ 1.94
C9orf3-208ENST00000451893 NF2P35240 595 aa27.17■■□□□ 1.94
C9orf3-208ENST00000451893 TTLL12Q14166 644 aaPredicted RBP27.17■■□□□ 1.94
C9orf3-208ENST00000451893 BRPF1P55201 1214 aaPredicted RBP27.16■■□□□ 1.94
C9orf3-208ENST00000451893 NBPF9Q3BBW0 867 aa27.16■■□□□ 1.94
C9orf3-208ENST00000451893 ALDH1L2Q3SY69 923 aa27.16■■□□□ 1.94
C9orf3-208ENST00000451893 CCDC102AQ96A19 550 aa27.16■■□□□ 1.94
C9orf3-208ENST00000451893 CDCA7LQ96GN5 454 aa27.16■■□□□ 1.94
C9orf3-208ENST00000451893 CA12O43570 354 aa27.15■■□□□ 1.94
C9orf3-208ENST00000451893 SASH1O94885 1247 aa27.15■■□□□ 1.94
C9orf3-208ENST00000451893 BICC1Q9H694 974 aaKnown RBP27.15■■□□□ 1.94
C9orf3-208ENST00000451893 WNT10BO00744 389 aa27.14■■□□□ 1.94
C9orf3-208ENST00000451893 C15orf52Q6ZUT6 534 aaKnown RBP27.14■■□□□ 1.94
C9orf3-208ENST00000451893 SCAF8Q9UPN6 1271 aaKnown RBP27.14■■□□□ 1.94
C9orf3-208ENST00000451893 ZNF646O15015 1829 aaPredicted RBP27.13■■□□□ 1.93
C9orf3-208ENST00000451893 F8W031 263 aaPredicted RBP27.13■■□□□ 1.93
C9orf3-208ENST00000451893 VPS37DQ86XT2 251 aa27.13■■□□□ 1.93
C9orf3-208ENST00000451893 TSKSQ9UJT2 592 aa27.13■■□□□ 1.93
C9orf3-208ENST00000451893 MROH5Q6ZUA9 1318 aa27.13■■□□□ 1.93
C9orf3-208ENST00000451893 DLGAP5Q15398 846 aa27.12■■□□□ 1.93
C9orf3-208ENST00000451893 APOBEC3FQ8IUX4 373 aaKnown RBP27.12■■□□□ 1.93
C9orf3-208ENST00000451893 UTYO14607 1347 aa27.12■■□□□ 1.93
C9orf3-208ENST00000451893 MYO1BO43795 1136 aa27.11■■□□□ 1.93
C9orf3-208ENST00000451893 FKBP1BP68106 108 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms